iLIR v1.0 WWW Server: RESULTS PAGE

Submitted 1 sequence
>sp|Q86V97|KBTB6_HUMAN Kelch repeat and BTB domain-containing protein 6 OS=Homo sapiens GN=KBTBD6 PE=1 SV=1

{"length":"674","regions":[{
startStyle: "curved", endStyle: "curved",
start: 63, end: 168, text: "BTB", colour: "#ff8800",
"metadata":{ database: "SMART", type: "BTB",
description: "BTB", start: 63, end: 168}
},
{
startStyle: "curved", endStyle: "curved",
start: 173, end: 279, text: "BACK", colour: "#ff8800",
"metadata":{ database: "SMART", type: "BACK",
description: "BACK", start: 173, end: 279}
},
{
startStyle: "straight", endStyle: "straight",
start: 310, end: 329, text: "LCR", colour: "#86bcff",
"metadata":{ database: "INTRINSIC", type: "low_complexity_region",
description: "LCR", start: 310, end: 329}
},
{
startStyle: "curved", endStyle: "curved",
start: 436, end: 484, text: "Kelch", colour: "#ff8800",
"metadata":{ database: "SMART", type: "Kelch",
description: "Kelch", start: 436, end: 484}
},
{
startStyle: "straight", endStyle: "straight",
start: 631, end: 643, text: "LCR", colour: "#86bcff",
"metadata":{ database: "INTRINSIC", type: "low_complexity_region",
description: "LCR", start: 631, end: 643}
},
{
startStyle: "straight", endStyle: "straight",
start: 650, end: 666, text: "LCR", colour: "#86bcff",
"metadata":{ database: "INTRINSIC", type: "low_complexity_region",
description: "LCR", start: 650, end: 666}
},
{
startStyle: "straight", endStyle: "straight",
start: 120, end: 125, text: "xLIR", colour: "#ff00ff",
lineStyle: "bold", v_align: "top", label: "xLIR",
"metadata":{ database: "xLIR web server", type: "xLIR-motif",
description: "xLIR-motif:ESFEVL", start: 120, end: 125}
},
]
}

xLIR motifs are displayed as magenta rectangles in the domain architecture graphic

MOTIF	START	END	LIR sequence	PSSM score	Similar LIRs	In PDB	Anchor
xLIR	120	125	ESFEVL	13 (7.9e-02)	FUND1_HUMAN 16-21 (4)	[+/-] 4HXI_A 4APF_A 4HXI_A 4APF_A 3HVE_A 4EOZ_A,C 3HVE_B 2IHC_A,B,C,D 4AP2_A 2Z8H_A 3I3N_A,B 2NN2_A,B 2IF5_A 3LBZ_A,B 3BIM_A,B,C,D,E,F,G,H 1R2B_A,B 3HTM_A,B,C,D 1R29_A 1R28_A,B 2VPK_A 3HU6_A,B 3HQI_A,B 3GA1_A,B 3E4U_A,B,C,D,E,F 3M52_A,B 2Q81_A,B,C,D 2PPI_A 4J8Z_A,B 2VKP_A,B 3B84_A 3OHV_A,B,C,D,E,F 3OHU_A,B,C,D,E,F 2YY9_A,B	No

No ANCHORs detected ...

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DOMAIN	START	END	E-VALUE	TYPE	STATUS
Pfam:BTB	53	168	2.3e-28	PFAM	hidden\|overlap
SMART:BTB	63	168	4.6e-24	SMART	visible\|OK
SMART:BACK	173	279	8.1e-20	SMART	visible\|OK
Pfam:BACK	173	278	8.5e-20	PFAM	hidden\|overlap
low_complexity_region	214	232	0	INTRINSIC	hidden\|overlap
low_complexity_region	310	329	0	INTRINSIC	visible\|OK
Pfam:Kelch_1	424	471	4.2e-12	PFAM	hidden\|overlap
SMART:Kelch	436	484	9.4e-05	SMART	visible\|OK
low_complexity_region	631	643	0	INTRINSIC	visible\|OK
low_complexity_region	650	666	0	INTRINSIC	visible\|OK