iLIR v1.0 WWW Server: RESULTS PAGE

Submitted 1 sequence
>sp|Q8WXU2|DYXC1_HUMAN Dyslexia susceptibility 1 candidate gene 1 protein OS=Homo sapiens GN=DYX1C1 PE=1 SV=2

{"length":"420","regions":[{
startStyle: "curved", endStyle: "curved",
start: 6, end: 77, text: "Pfam:CS", colour: "#ff8800",
"metadata":{ database: "PFAM", type: "Pfam:CS",
description: "Pfam:CS", start: 6, end: 77}
},
{
startStyle: "straight", endStyle: "straight",
start: 101, end: 194, text: "CC", colour: "#9cff00",
"metadata":{ database: "INTRINSIC", type: "coiled_coil_region",
description: "CC", start: 101, end: 194}
},
{
startStyle: "curved", endStyle: "curved",
start: 290, end: 323, text: "TPR", colour: "#ff8800",
"metadata":{ database: "SMART", type: "TPR",
description: "TPR", start: 290, end: 323}
},
{
startStyle: "curved", endStyle: "curved",
start: 324, end: 357, text: "TPR", colour: "#ff8800",
"metadata":{ database: "SMART", type: "TPR",
description: "TPR", start: 324, end: 357}
},
{
startStyle: "curved", endStyle: "curved",
start: 366, end: 399, text: "TPR", colour: "#ff8800",
"metadata":{ database: "SMART", type: "TPR",
description: "TPR", start: 366, end: 399}
},
{
startStyle: "straight", endStyle: "straight",
start: 16, end: 21, text: "xLIR", colour: "#ff00ff",
lineStyle: "bold", v_align: "top", label: "xLIR",
"metadata":{ database: "xLIR web server", type: "xLIR-motif",
description: "xLIR-motif:AVFLSL", start: 16, end: 21}
},
{
startStyle: "straight", endStyle: "straight",
start: 81, end: 86, text: "xLIR", colour: "#ff00ff",
lineStyle: "bold", v_align: "top", label: "xLIR",
"metadata":{ database: "xLIR web server", type: "xLIR-motif",
description: "xLIR-motif:AMWETL", start: 81, end: 86}
},
]
}

xLIR motifs are displayed as magenta rectangles in the domain architecture graphic

MOTIF	START	END	LIR sequence	PSSM score	Similar LIRs	In PDB	Anchor
xLIR	16	21	AVFLSL	6 (7.4e-01)			No
xLIR	81	86	AMWETL	19 (1.2e-02)			No

[+/-] Show/Hide Detailed ANCHOR results

DOMAIN	START	END	STATUS
ANCHOR1	128	134	hidden
ANCHOR2	196	205	hidden
ANCHOR3	236	247	hidden

[+/-] Show/Hide Detailed SMART results

DOMAIN	START	END	E-VALUE	TYPE	STATUS
Pfam:CS	6	77	6.3e-17	PFAM	visible\|OK
coiled_coil_region	101	194	0	INTRINSIC	visible\|OK
low_complexity_region	106	124	0	INTRINSIC	hidden\|overlap
low_complexity_region	133	149	0	INTRINSIC	hidden\|overlap
low_complexity_region	183	198	0	INTRINSIC	hidden\|overlap
SMART:TPR	290	323	1.00637434495793	SMART	visible\|OK
low_complexity_region	305	321	0	INTRINSIC	hidden\|overlap
SMART:TPR	324	357	2.47797048071787	SMART	visible\|OK
Pfam:TPR_1	324	354	8.6e-07	PFAM	hidden\|overlap
SMART:TPR	366	399	0.000855569430769354	SMART	visible\|OK
Pfam:TPR_1	367	399	1.6e-07	PFAM	hidden\|overlap