iLIR v1.0 WWW Server: RESULTS PAGE

Submitted 1 sequence
>sp|Q86VP1|TAXB1_HUMAN Tax1-binding protein 1 OS=Homo sapiens GN=TAX1BP1 PE=1 SV=2

{"length":"789","regions":[{
startStyle: "curved", endStyle: "curved",
start: 12, end: 480, text: "Pfam:CALCOCO1", colour: "#ff8800",
"metadata":{ database: "PFAM", type: "Pfam:CALCOCO1",
description: "Pfam:CALCOCO1", start: 12, end: 480}
},
{
startStyle: "straight", endStyle: "straight",
start: 567, end: 600, text: "CC", colour: "#9cff00",
"metadata":{ database: "INTRINSIC", type: "coiled_coil_region",
description: "CC", start: 567, end: 600}
},
{
startStyle: "curved", endStyle: "curved",
start: 728, end: 753, text: "ZnF_C2H2", colour: "#ff8800",
"metadata":{ database: "SMART", type: "ZnF_C2H2",
description: "ZnF_C2H2", start: 728, end: 753}
},
{
startStyle: "curved", endStyle: "curved",
start: 755, end: 780, text: "ZnF_C2H2", colour: "#ff8800",
"metadata":{ database: "SMART", type: "ZnF_C2H2",
description: "ZnF_C2H2", start: 755, end: 780}
},
{
startStyle: "straight", endStyle: "straight",
start: 514, end: 519, text: "xLIR", colour: "#ff00ff",
lineStyle: "bold", v_align: "top", label: "xLIR",
"metadata":{ database: "xLIR web server", type: "xLIR-motif",
description: "xLIR-motif:ADFDIV", start: 514, end: 519}
},
]
}

xLIR motifs are displayed as magenta rectangles in the domain architecture graphic

MOTIF	START	END	LIR sequence	PSSM score	Similar LIRs	In PDB	Anchor
xLIR	514	519	ADFDIV	15 (4.2e-02)	FYCO1_HUMAN 1278-1283 (4)		Yes

[+/-] Show/Hide Detailed ANCHOR results

DOMAIN	START	END	STATUS
ANCHOR1	164	172	hidden
ANCHOR2	407	415	hidden
ANCHOR3	438	461	hidden
ANCHOR4	515	521	hidden
ANCHOR5	615	639	hidden
ANCHOR6	648	657	hidden
ANCHOR7	664	677	hidden
ANCHOR8	716	725	hidden

[+/-] Show/Hide Detailed SMART results

DOMAIN	START	END	E-VALUE	TYPE	STATUS
Pfam:CALCOCO1	12	480	5.7e-80	PFAM	visible\|OK
coiled_coil_region	145	306	0	INTRINSIC	hidden\|overlap
low_complexity_region	149	174	0	INTRINSIC	hidden\|overlap
coiled_coil_region	351	472	0	INTRINSIC	hidden\|overlap
coiled_coil_region	567	600	0	INTRINSIC	visible\|OK
internal_repeat_1	720	754	6.0e-16	PROSPERO	hidden\|overlap
SMART:ZnF_C2H2	728	753	69.9864875378993	SMART	visible\|OK
internal_repeat_1	746	781	6.0e-16	PROSPERO	hidden\|overlap
SMART:ZnF_C2H2	755	780	37.5067876800692	SMART	visible\|OK