LIR-containing proteins in  Alphaflexiviridae   >> EXPORT DATA


S.No. Uniprot ID Start End LIR sequence PSSM Score    Pattern LIR in Anchor Description Species
401P20951 1343 1348 LQFEIL 9 WxxL No RNA replication protein Papaya mosaic potexvirus
402P17779 983 988 KTFLSV 9 xLIR Yes RNA replication protein Potato virus X (strain X3)
403P17779 344 349 DKYSAV 9 WxxL No RNA replication protein Potato virus X (strain X3)
404P17779 948 953 VMYTAL 9 WxxL No RNA replication protein Potato virus X (strain X3)
405P17779 1255 1260 LQFEVL 9 WxxL No RNA replication protein Potato virus X (strain X3)
406P15402 1090 1095 LQFEVI 9 WxxL No RNA replication protein White clover mosaic virus (strain O)
407P15402 1176 1181 PSFNMI 9 WxxL No RNA replication protein White clover mosaic virus (strain O)
408Q04575 140 145 TEYAVL 9 WxxL No RNA replication protein Shallot virus X
409Q918W3 1150 1155 VMYTAL 9 WxxL No RNA replication protein Indian citrus ringspot virus (isolate Kinnow mandarin/India/K1/1996)
410Q918W3 1474 1479 AGYKHL 9 WxxL No RNA replication protein Indian citrus ringspot virus (isolate Kinnow mandarin/India/K1/1996)
411Q918W3 1620 1625 ELYELL 9 WxxL No RNA replication protein Indian citrus ringspot virus (isolate Kinnow mandarin/India/K1/1996)
412P15095 1391 1396 LQFEVI 9 WxxL No RNA replication protein Narcissus mosaic virus
413P15095 1477 1482 DSFNRL 9 WxxL No RNA replication protein Narcissus mosaic virus
414Q07518 1183 1188 LQFEIL 9 WxxL No RNA replication protein Plantago asiatica mosaic potexvirus
415P09395 983 988 KTFLSV 9 xLIR Yes RNA replication protein Potato virus X
416P09395 344 349 DKYSAV 9 WxxL No RNA replication protein Potato virus X
417P09395 948 953 VMYTAL 9 WxxL No RNA replication protein Potato virus X
418P09395 1255 1260 LQFEVL 9 WxxL No RNA replication protein Potato virus X
419P22591 983 988 KTFLSV 9 xLIR Yes RNA replication protein Potato virus X (strain CP)
420P22591 216 221 HEFTDL 9 WxxL No RNA replication protein Potato virus X (strain CP)
421P22591 1255 1260 LQFEVL 9 WxxL No RNA replication protein Potato virus X (strain CP)
422P28897 92 97 VTFLFL 9 WxxL No RNA replication protein Strawberry mild yellow edge-associated virus
423P28897 200 205 GGFQYL 9 WxxL No RNA replication protein Strawberry mild yellow edge-associated virus
424P28897 818 823 VMYTAL 9 WxxL No RNA replication protein Strawberry mild yellow edge-associated virus
425P28897 1123 1128 LQFEVI 9 WxxL No RNA replication protein Strawberry mild yellow edge-associated virus
426B1PS76 1057 1062 HGYIDL 9 WxxL No RNA-directed RNA polymerase Lolium latent virus (isolate Lolium/USA/US1/-)
427B1PS76 1196 1201 HMYTAL 9 WxxL No RNA-directed RNA polymerase Lolium latent virus (isolate Lolium/USA/US1/-)
428Q07630 983 988 KTFLSV 9 xLIR Yes RNA replication protein Potato virus X (strain HB)
429Q07630 948 953 VMYTAL 9 WxxL No RNA replication protein Potato virus X (strain HB)
430Q07630 1255 1260 LQFEVL 9 WxxL No RNA replication protein Potato virus X (strain HB)
431P22168 201 206 DRFLYL 9 WxxL No RNA replication protein Foxtail mosaic virus
432P22168 814 819 VMYTAL 9 WxxL No RNA replication protein Foxtail mosaic virus
433P22168 1121 1126 LQFEVL 9 WxxL No RNA replication protein Foxtail mosaic virus
434P22168 1207 1212 QSFLPL 9 WxxL No RNA replication protein Foxtail mosaic virus
435Q6YI57 58 63 DGYCYL 9 WxxL No RNA replication protein Sclerotinia sclerotiorum debilitation-associated virus (isolate Sclerotinia/China/Xie/-)
436Q6YI57 1388 1393 VEFERL 9 WxxL No RNA replication protein Sclerotinia sclerotiorum debilitation-associated virus (isolate Sclerotinia/China/Xie/-)
437P09498 1090 1095 LQFEVI 9 WxxL No RNA replication protein White clover mosaic virus (strain M)
438P09498 1176 1181 PSFNMI 9 WxxL No RNA replication protein White clover mosaic virus (strain M)
439Q04582 71 76 NLWPFI 9 WxxL No Movement protein TGB2 Shallot virus X
440Q00846 44 49 LTFQLI 9 xLIR No Movement and silencing protein TGBp1 Strawberry mild yellow edge-associated virus
441Q00846 205 210 SVYVAL 9 xLIR No Movement and silencing protein TGBp1 Strawberry mild yellow edge-associated virus
442Q00846 212 217 RHYERL 9 WxxL No Movement and silencing protein TGBp1 Strawberry mild yellow edge-associated virus
443P27329 200 205 SRYIAL 9 WxxL No Movement and silencing protein TGBp1 Lily virus X
444P15403 189 194 YQWPTV 9 WxxL No Movement and silencing protein TGBp1 White clover mosaic virus (strain O)
445P15098 90 95 SPWNGV 9 WxxL No Movement protein TGBp3 Narcissus mosaic virus
446Q07632 92 97 EAYQAL 9 WxxL No Movement and silencing protein TGBp1 Potato virus X (strain HB)
447Q00478 79 84 GPWRGL 9 WxxL No Movement protein TGBp3 Cymbidium mosaic virus (strain Singapore)
448P20952 90 95 AKFQVL 9 WxxL No Movement and silencing protein TGBp1 Papaya mosaic potexvirus
449P22592 92 97 EAYQAL 9 WxxL No Movement and silencing protein TGBp1 Potato virus X (strain CP)
450P09499 189 194 YQWPTV 9 WxxL No Movement and silencing protein TGBp1 White clover mosaic virus (strain M)









Copyright © Ioannis Nezis lab | University of Warwick