LIR-containing proteins with dsRNA >> EXPORT DATA


S.No. Uniprot ID Start End LIR sequence PSSM Score    Pattern Description Species
4501P25173 340 345 SRYEVI 11 WxxL Outer capsid protein VP4 Rotavirus A (strain Cow/United States/B641/198? G6-P7[5]-Ix-Rx-Cx-Mx-A3-Nx-Tx-Ex-Hx)
4502P25173 348 353 NSYVYV 9 WxxL Outer capsid protein VP4 Rotavirus A (strain Cow/United States/B641/198? G6-P7[5]-Ix-Rx-Cx-Mx-A3-Nx-Tx-Ex-Hx)
4503P25173 385 390 YSFALL 5 WxxL Outer capsid protein VP4 Rotavirus A (strain Cow/United States/B641/198? G6-P7[5]-Ix-Rx-Cx-Mx-A3-Nx-Tx-Ex-Hx)
4504P25173 416 421 TDFVSL 14 WxxL Outer capsid protein VP4 Rotavirus A (strain Cow/United States/B641/198? G6-P7[5]-Ix-Rx-Cx-Mx-A3-Nx-Tx-Ex-Hx)
4505P25173 459 464 REYYEV 10 WxxL Outer capsid protein VP4 Rotavirus A (strain Cow/United States/B641/198? G6-P7[5]-Ix-Rx-Cx-Mx-A3-Nx-Tx-Ex-Hx)
4506P25173 466 471 GRFSLI 5 WxxL Outer capsid protein VP4 Rotavirus A (strain Cow/United States/B641/198? G6-P7[5]-Ix-Rx-Cx-Mx-A3-Nx-Tx-Ex-Hx)
4507P25173 503 508 EEFNNL 7 WxxL Outer capsid protein VP4 Rotavirus A (strain Cow/United States/B641/198? G6-P7[5]-Ix-Rx-Cx-Mx-A3-Nx-Tx-Ex-Hx)
4508P25173 529 534 SMFSGI 7 WxxL Outer capsid protein VP4 Rotavirus A (strain Cow/United States/B641/198? G6-P7[5]-Ix-Rx-Cx-Mx-A3-Nx-Tx-Ex-Hx)
4509P25173 589 594 SAWTNI 13 WxxL Outer capsid protein VP4 Rotavirus A (strain Cow/United States/B641/198? G6-P7[5]-Ix-Rx-Cx-Mx-A3-Nx-Tx-Ex-Hx)
4510P25173 631 636 MSFDDI 9 WxxL Outer capsid protein VP4 Rotavirus A (strain Cow/United States/B641/198? G6-P7[5]-Ix-Rx-Cx-Mx-A3-Nx-Tx-Ex-Hx)
4511P25173 671 676 RAYRVI 7 WxxL Outer capsid protein VP4 Rotavirus A (strain Cow/United States/B641/198? G6-P7[5]-Ix-Rx-Cx-Mx-A3-Nx-Tx-Ex-Hx)
4512P25173 706 711 EKFADL 6 WxxL Outer capsid protein VP4 Rotavirus A (strain Cow/United States/B641/198? G6-P7[5]-Ix-Rx-Cx-Mx-A3-Nx-Tx-Ex-Hx)
4513P25173 722 727 IDFKTL 11 WxxL Outer capsid protein VP4 Rotavirus A (strain Cow/United States/B641/198? G6-P7[5]-Ix-Rx-Cx-Mx-A3-Nx-Tx-Ex-Hx)
4514P25173 740 745 QAFNLL 3 WxxL Outer capsid protein VP4 Rotavirus A (strain Cow/United States/B641/198? G6-P7[5]-Ix-Rx-Cx-Mx-A3-Nx-Tx-Ex-Hx)
4515P36307 104 109 FTYLVL 13 xLIR Outer capsid protein VP4 Rotavirus A (isolate Cow/Thailand/A44/1988 G10-P8[11]-Ix-Rx-Cx-Mx-A3-Nx-Tx-Ex-Hx)
4516P36307 403 408 LTFDSV 9 xLIR Outer capsid protein VP4 Rotavirus A (isolate Cow/Thailand/A44/1988 G10-P8[11]-Ix-Rx-Cx-Mx-A3-Nx-Tx-Ex-Hx)
4517P36307 588 593 SVWTDI 14 xLIR Outer capsid protein VP4 Rotavirus A (isolate Cow/Thailand/A44/1988 G10-P8[11]-Ix-Rx-Cx-Mx-A3-Nx-Tx-Ex-Hx)
4518P36307 692 697 ETFEEV 12 xLIR Outer capsid protein VP4 Rotavirus A (isolate Cow/Thailand/A44/1988 G10-P8[11]-Ix-Rx-Cx-Mx-A3-Nx-Tx-Ex-Hx)
4519P36307 4 9 LIYRQL 2 WxxL Outer capsid protein VP4 Rotavirus A (isolate Cow/Thailand/A44/1988 G10-P8[11]-Ix-Rx-Cx-Mx-A3-Nx-Tx-Ex-Hx)
4520P36307 43 48 SQYAPV 6 WxxL Outer capsid protein VP4 Rotavirus A (isolate Cow/Thailand/A44/1988 G10-P8[11]-Ix-Rx-Cx-Mx-A3-Nx-Tx-Ex-Hx)
4521P36307 79 84 NCWYLV 8 WxxL Outer capsid protein VP4 Rotavirus A (isolate Cow/Thailand/A44/1988 G10-P8[11]-Ix-Rx-Cx-Mx-A3-Nx-Tx-Ex-Hx)
4522P36307 102 107 WMFTYL 6 WxxL Outer capsid protein VP4 Rotavirus A (isolate Cow/Thailand/A44/1988 G10-P8[11]-Ix-Rx-Cx-Mx-A3-Nx-Tx-Ex-Hx)
4523P36307 204 209 ADFYVI 12 WxxL Outer capsid protein VP4 Rotavirus A (isolate Cow/Thailand/A44/1988 G10-P8[11]-Ix-Rx-Cx-Mx-A3-Nx-Tx-Ex-Hx)
4524P36307 259 264 SLWKEV 12 WxxL Outer capsid protein VP4 Rotavirus A (isolate Cow/Thailand/A44/1988 G10-P8[11]-Ix-Rx-Cx-Mx-A3-Nx-Tx-Ex-Hx)
4525P36307 288 293 YKWSEI 12 WxxL Outer capsid protein VP4 Rotavirus A (isolate Cow/Thailand/A44/1988 G10-P8[11]-Ix-Rx-Cx-Mx-A3-Nx-Tx-Ex-Hx)
4526P36307 339 344 RNYDVL 13 WxxL Outer capsid protein VP4 Rotavirus A (isolate Cow/Thailand/A44/1988 G10-P8[11]-Ix-Rx-Cx-Mx-A3-Nx-Tx-Ex-Hx)
4527P36307 347 352 SSFVYV 10 WxxL Outer capsid protein VP4 Rotavirus A (isolate Cow/Thailand/A44/1988 G10-P8[11]-Ix-Rx-Cx-Mx-A3-Nx-Tx-Ex-Hx)
4528P36307 415 420 TDYVSL 15 WxxL Outer capsid protein VP4 Rotavirus A (isolate Cow/Thailand/A44/1988 G10-P8[11]-Ix-Rx-Cx-Mx-A3-Nx-Tx-Ex-Hx)
4529P36307 465 470 GRFSLI 5 WxxL Outer capsid protein VP4 Rotavirus A (isolate Cow/Thailand/A44/1988 G10-P8[11]-Ix-Rx-Cx-Mx-A3-Nx-Tx-Ex-Hx)
4530P36307 502 507 REFNEL 10 WxxL Outer capsid protein VP4 Rotavirus A (isolate Cow/Thailand/A44/1988 G10-P8[11]-Ix-Rx-Cx-Mx-A3-Nx-Tx-Ex-Hx)
4531P36307 528 533 SMFSGI 7 WxxL Outer capsid protein VP4 Rotavirus A (isolate Cow/Thailand/A44/1988 G10-P8[11]-Ix-Rx-Cx-Mx-A3-Nx-Tx-Ex-Hx)
4532P36307 622 627 TEFNGV 4 WxxL Outer capsid protein VP4 Rotavirus A (isolate Cow/Thailand/A44/1988 G10-P8[11]-Ix-Rx-Cx-Mx-A3-Nx-Tx-Ex-Hx)
4533P36307 667 672 RAYRLI 6 WxxL Outer capsid protein VP4 Rotavirus A (isolate Cow/Thailand/A44/1988 G10-P8[11]-Ix-Rx-Cx-Mx-A3-Nx-Tx-Ex-Hx)
4534P36307 685 690 KYFAYL 2 WxxL Outer capsid protein VP4 Rotavirus A (isolate Cow/Thailand/A44/1988 G10-P8[11]-Ix-Rx-Cx-Mx-A3-Nx-Tx-Ex-Hx)
4535P36307 702 707 ERFAEL 6 WxxL Outer capsid protein VP4 Rotavirus A (isolate Cow/Thailand/A44/1988 G10-P8[11]-Ix-Rx-Cx-Mx-A3-Nx-Tx-Ex-Hx)
4536P36307 718 723 IDFKTI 11 WxxL Outer capsid protein VP4 Rotavirus A (isolate Cow/Thailand/A44/1988 G10-P8[11]-Ix-Rx-Cx-Mx-A3-Nx-Tx-Ex-Hx)
4537P33428 635 640 DSWLEL 21 xLIR Core protein VP4 Bluetongue virus 11 (isolate USA)
4538P33428 20 25 NGFLPI 9 WxxL Core protein VP4 Bluetongue virus 11 (isolate USA)
4539P33428 49 54 YAYGDV 1 WxxL Core protein VP4 Bluetongue virus 11 (isolate USA)
4540P33428 65 70 HGFIFI 9 WxxL Core protein VP4 Bluetongue virus 11 (isolate USA)
4541P33428 161 166 MEYAEI 8 WxxL Core protein VP4 Bluetongue virus 11 (isolate USA)
4542P33428 213 218 GRFRRV 2 WxxL Core protein VP4 Bluetongue virus 11 (isolate USA)
4543P33428 221 226 HVYDPI 6 WxxL Core protein VP4 Bluetongue virus 11 (isolate USA)
4544P33428 314 319 DEYHCI 10 WxxL Core protein VP4 Bluetongue virus 11 (isolate USA)
4545P33428 337 342 RNFMRL 7 WxxL Core protein VP4 Bluetongue virus 11 (isolate USA)
4546P33428 343 348 RGYSHV 9 WxxL Core protein VP4 Bluetongue virus 11 (isolate USA)
4547P33428 385 390 RLFEHL 8 WxxL Core protein VP4 Bluetongue virus 11 (isolate USA)
4548P33428 460 465 GSYRDI 8 WxxL Core protein VP4 Bluetongue virus 11 (isolate USA)
4549P33428 479 484 WRYPDI 1 WxxL Core protein VP4 Bluetongue virus 11 (isolate USA)
4550P33428 518 523 CRFIGL 2 WxxL Core protein VP4 Bluetongue virus 11 (isolate USA)

Copyright © Ioannis Nezis lab | University of Warwick