iLIR
@Viral
Home
Classification
ICTV
Caudovirales
Myoviridae
Podoviridae
Siphoviridae
Herpesvirales
Alloherpesviridae
Herpesviridae
Malacoherpesviridae
Ligamenvirales
Lipothrixviridae
Rudiviridae
Mononegavirales
Bornaviridae
Filoviridae
Mymonaviridae
Nyamiviridae
Paramyxoviridae
Pneumoviridae
Rhabdoviridae
Sunviridae
Unassigned
Nidovirales
Arteriviridae
Coronaviridae
Mesoniviridae
Roniviridae
Picornavirales
Dicistroviridae
Iflaviridae
Marnaviridae
Picornaviridae
Secoviridae
Unassigned
Tymovirales
Alphaflexiviridae
Betaflexiviridae
Gammaflexiviridae
Tymoviridae
Unassigned order
Baltimore system
dsDNA
Caudovirales
Myoviridae
Podoviridae
Siphoviridae
Herpesvirales
Alloherpesviridae
Herpesviridae
Malacoherpesviridae
Ligamenvirales
Lipothrixviridae
Rudiviridae
Unassigned order
dsRNA
Unassigned order
Amalgaviridae
Birnaviridae
Chrysoviridae
Cystoviridae
Endornaviridae
Hypoviridae
Megabirnaviridae
Partitiviridae
Picobirnaviridae
Quadriviridae
Reoviridae
Totiviridae
ssDNA
Unassigned order
Anelloviridae
Bidnaviridae
Circoviridae
Geminiviridae
Inoviridae
Nanoviridae
Microviridae
Mycodnaviridae
Parvoviridae
Pleolipoviridae
Spiraviridae
ssRNA (+)
Tymovirales
Alphaflexiviridae
Betaflexiviridae
Gammaflexiviridae
Tymoviridae
Picornavirales
Dicistroviridae
Picornaviridae
Secoviridae
Nidovirales
Arteriviridae
Coronaviridae
Mesoniviridae
Roniviridae
ssRNA (-)
Mononegavirales
Bornaviridae
Rhadbdoviridae
Filoviridae
Nyamaviridae
Paramyxoviridae
Unassigned order
Arenaviridae
Bunyaviridae
Ophioviridae
Orthomyxoviridae
ssRNA-RT
Retroviridae
dsDNA-RT
Caulimoviridae
Hepadnaviridae
Search
BLAST
ICTV
Baltimore system
Bibliography
Help
Links
iLIR Database
LIR Motif Search
LIR-containing proteins in
Secoviridae
>> EXPORT DATA
<< prev
1
2
3
4
5
6
7
...
29
30
next >>
S.No.
Uniprot ID
Start
End
LIR sequence
PSSM Score
▲
▼
Pattern
LIR in Anchor
Description
Species
1
Q88894
329
334
GSYEFI
13
xLIR
No
Capsid protein
Tobacco ringspot virus
2
Q88894
40
45
MDYGGL
7
WxxL
No
Capsid protein
Tobacco ringspot virus
3
Q88894
69
74
NAFAGL
1
WxxL
No
Capsid protein
Tobacco ringspot virus
4
Q88894
81
86
DDYKRI
15
WxxL
No
Capsid protein
Tobacco ringspot virus
5
Q88894
120
125
FNYGEL
8
WxxL
No
Capsid protein
Tobacco ringspot virus
6
Q88894
131
136
CNWANV
7
WxxL
No
Capsid protein
Tobacco ringspot virus
7
Q88894
141
146
TLYFFV
3
WxxL
No
Capsid protein
Tobacco ringspot virus
8
Q88894
156
161
ADWQCI
19
WxxL
No
Capsid protein
Tobacco ringspot virus
9
Q88894
308
313
EGFGRL
6
WxxL
No
Capsid protein
Tobacco ringspot virus
10
Q88894
357
362
YNWFTL
12
WxxL
No
Capsid protein
Tobacco ringspot virus
11
Q88894
408
413
WHYGEV
1
WxxL
No
Capsid protein
Tobacco ringspot virus
12
Q88894
480
485
QNYVRI
9
WxxL
No
Capsid protein
Tobacco ringspot virus
13
Q6W8W5
304
309
DDWVLI
25
xLIR
No
RNA1 polyprotein
Arabis mosaic virus (isolate NW)
14
Q6W8W5
1024
1029
FSFLAV
10
xLIR
No
RNA1 polyprotein
Arabis mosaic virus (isolate NW)
15
Q6W8W5
1528
1533
EGYTPI
12
xLIR
No
RNA1 polyprotein
Arabis mosaic virus (isolate NW)
16
Q6W8W5
1713
1718
REWTDL
19
xLIR
No
RNA1 polyprotein
Arabis mosaic virus (isolate NW)
17
Q6W8W5
107
112
LVYPAL
2
WxxL
No
RNA1 polyprotein
Arabis mosaic virus (isolate NW)
18
Q6W8W5
169
174
VAFNGI
0
WxxL
No
RNA1 polyprotein
Arabis mosaic virus (isolate NW)
19
Q6W8W5
223
228
ALFKRL
3
WxxL
No
RNA1 polyprotein
Arabis mosaic virus (isolate NW)
20
Q6W8W5
232
237
CTFQDL
7
WxxL
No
RNA1 polyprotein
Arabis mosaic virus (isolate NW)
21
Q6W8W5
250
255
ACYRKV
3
WxxL
No
RNA1 polyprotein
Arabis mosaic virus (isolate NW)
22
Q6W8W5
283
288
QDFSCV
8
WxxL
Yes
RNA1 polyprotein
Arabis mosaic virus (isolate NW)
23
Q6W8W5
362
367
GEFAEL
9
WxxL
No
RNA1 polyprotein
Arabis mosaic virus (isolate NW)
24
Q6W8W5
489
494
KIWKKL
11
WxxL
No
RNA1 polyprotein
Arabis mosaic virus (isolate NW)
25
Q6W8W5
550
555
GAFLTL
8
WxxL
No
RNA1 polyprotein
Arabis mosaic virus (isolate NW)
26
Q6W8W5
632
637
SYYAKI
5
WxxL
No
RNA1 polyprotein
Arabis mosaic virus (isolate NW)
27
Q6W8W5
639
644
QGFDQL
9
WxxL
No
RNA1 polyprotein
Arabis mosaic virus (isolate NW)
28
Q6W8W5
664
669
GVYSKV
4
WxxL
No
RNA1 polyprotein
Arabis mosaic virus (isolate NW)
29
Q6W8W5
675
680
TFFDEL
6
WxxL
No
RNA1 polyprotein
Arabis mosaic virus (isolate NW)
30
Q6W8W5
773
778
PFWVYI
12
WxxL
No
RNA1 polyprotein
Arabis mosaic virus (isolate NW)
31
Q6W8W5
831
836
DDFYAI
14
WxxL
No
RNA1 polyprotein
Arabis mosaic virus (isolate NW)
32
Q6W8W5
1022
1027
EGFSFL
10
WxxL
No
RNA1 polyprotein
Arabis mosaic virus (isolate NW)
33
Q6W8W5
1034
1039
YKYNVL
5
WxxL
No
RNA1 polyprotein
Arabis mosaic virus (isolate NW)
34
Q6W8W5
1113
1118
AFFKRL
2
WxxL
No
RNA1 polyprotein
Arabis mosaic virus (isolate NW)
35
Q6W8W5
1123
1128
RIYLRL
7
WxxL
No
RNA1 polyprotein
Arabis mosaic virus (isolate NW)
36
Q6W8W5
1165
1170
ENYSLL
9
WxxL
No
RNA1 polyprotein
Arabis mosaic virus (isolate NW)
37
Q6W8W5
1182
1187
TAYSLI
5
WxxL
No
RNA1 polyprotein
Arabis mosaic virus (isolate NW)
38
Q6W8W5
1259
1264
YYFDGV
2
WxxL
No
RNA1 polyprotein
Arabis mosaic virus (isolate NW)
39
Q6W8W5
1444
1449
VTYSSV
6
WxxL
No
RNA1 polyprotein
Arabis mosaic virus (isolate NW)
40
Q6W8W5
1473
1478
NGYRKV
6
WxxL
No
RNA1 polyprotein
Arabis mosaic virus (isolate NW)
41
Q6W8W5
1493
1498
TAFMKV
3
WxxL
No
RNA1 polyprotein
Arabis mosaic virus (isolate NW)
42
Q6W8W5
1586
1591
EYFDPI
8
WxxL
No
RNA1 polyprotein
Arabis mosaic virus (isolate NW)
43
Q6W8W5
1597
1602
EGYPEV
8
WxxL
No
RNA1 polyprotein
Arabis mosaic virus (isolate NW)
44
Q6W8W5
1633
1638
RAYLSL
9
WxxL
No
RNA1 polyprotein
Arabis mosaic virus (isolate NW)
45
Q6W8W5
1671
1676
RLFSVL
6
WxxL
No
RNA1 polyprotein
Arabis mosaic virus (isolate NW)
46
Q6W8W5
1678
1683
LAYNLL
4
WxxL
No
RNA1 polyprotein
Arabis mosaic virus (isolate NW)
47
Q6W8W5
1689
1694
LSFSRL
6
WxxL
No
RNA1 polyprotein
Arabis mosaic virus (isolate NW)
48
Q6W8W5
1735
1740
KGFDGL
9
WxxL
No
RNA1 polyprotein
Arabis mosaic virus (isolate NW)
49
Q6W8W5
1803
1808
SIFNEL
5
WxxL
No
RNA1 polyprotein
Arabis mosaic virus (isolate NW)
50
Q6W8W5
1812
1817
YCYKKI
3
WxxL
No
RNA1 polyprotein
Arabis mosaic virus (isolate NW)
Copyright ©
Ioannis Nezis lab
|
University of Warwick