LIR-containing proteins with ssRNA_neg >> EXPORT DATA


S.No. Uniprot ID Start End LIR sequence PSSM Score    Pattern Description Species
6951P28976 911 916 SDYSNI 12 WxxL RNA-directed RNA polymerase L Tomato spotted wilt virus (strain Brazilian Br-01)
6952P28976 990 995 DLYNNV 4 WxxL RNA-directed RNA polymerase L Tomato spotted wilt virus (strain Brazilian Br-01)
6953P28976 1034 1039 NIFEDI 6 WxxL RNA-directed RNA polymerase L Tomato spotted wilt virus (strain Brazilian Br-01)
6954P28976 1222 1227 ELYDLV 8 WxxL RNA-directed RNA polymerase L Tomato spotted wilt virus (strain Brazilian Br-01)
6955P28976 1308 1313 HTFKHV 5 WxxL RNA-directed RNA polymerase L Tomato spotted wilt virus (strain Brazilian Br-01)
6956P28976 1342 1347 TSYNDI 7 WxxL RNA-directed RNA polymerase L Tomato spotted wilt virus (strain Brazilian Br-01)
6957P28976 1373 1378 TTYKYV 6 WxxL RNA-directed RNA polymerase L Tomato spotted wilt virus (strain Brazilian Br-01)
6958P28976 1413 1418 DIFLNL 7 WxxL RNA-directed RNA polymerase L Tomato spotted wilt virus (strain Brazilian Br-01)
6959P28976 1518 1523 MLFRSI 1 WxxL RNA-directed RNA polymerase L Tomato spotted wilt virus (strain Brazilian Br-01)
6960P28976 1557 1562 SDYSSL 14 WxxL RNA-directed RNA polymerase L Tomato spotted wilt virus (strain Brazilian Br-01)
6961P28976 1564 1569 QAFSKL 4 WxxL RNA-directed RNA polymerase L Tomato spotted wilt virus (strain Brazilian Br-01)
6962P28976 1577 1582 KLFDDL 7 WxxL RNA-directed RNA polymerase L Tomato spotted wilt virus (strain Brazilian Br-01)
6963P28976 1604 1609 FAYGAV 4 WxxL RNA-directed RNA polymerase L Tomato spotted wilt virus (strain Brazilian Br-01)
6964P28976 1615 1620 SIYSML 8 WxxL RNA-directed RNA polymerase L Tomato spotted wilt virus (strain Brazilian Br-01)
6965P28976 1629 1634 RIFNKL 4 WxxL RNA-directed RNA polymerase L Tomato spotted wilt virus (strain Brazilian Br-01)
6966P28976 1669 1674 IIYYNV -1 WxxL RNA-directed RNA polymerase L Tomato spotted wilt virus (strain Brazilian Br-01)
6967P28976 1699 1704 MRFREL 3 WxxL RNA-directed RNA polymerase L Tomato spotted wilt virus (strain Brazilian Br-01)
6968P28976 1771 1776 KDFSKL 12 WxxL RNA-directed RNA polymerase L Tomato spotted wilt virus (strain Brazilian Br-01)
6969P28976 1805 1810 ELYKKI 6 WxxL RNA-directed RNA polymerase L Tomato spotted wilt virus (strain Brazilian Br-01)
6970P28976 1876 1881 RTFVNI 10 WxxL RNA-directed RNA polymerase L Tomato spotted wilt virus (strain Brazilian Br-01)
6971P28976 1922 1927 VNFSML 7 WxxL RNA-directed RNA polymerase L Tomato spotted wilt virus (strain Brazilian Br-01)
6972P28976 1953 1958 ERWIPV 14 WxxL RNA-directed RNA polymerase L Tomato spotted wilt virus (strain Brazilian Br-01)
6973P28976 2086 2091 ESYHFV 9 WxxL RNA-directed RNA polymerase L Tomato spotted wilt virus (strain Brazilian Br-01)
6974P28976 2130 2135 SLFPTI 4 WxxL RNA-directed RNA polymerase L Tomato spotted wilt virus (strain Brazilian Br-01)
6975P28976 2153 2158 PIWQSL 13 WxxL RNA-directed RNA polymerase L Tomato spotted wilt virus (strain Brazilian Br-01)
6976P28976 2247 2252 SCYVEL 10 WxxL RNA-directed RNA polymerase L Tomato spotted wilt virus (strain Brazilian Br-01)
6977P28976 2265 2270 TPFEIL 8 WxxL RNA-directed RNA polymerase L Tomato spotted wilt virus (strain Brazilian Br-01)
6978P28976 2291 2296 IMFDKV 8 WxxL RNA-directed RNA polymerase L Tomato spotted wilt virus (strain Brazilian Br-01)
6979P28976 2345 2350 IKYENV 5 WxxL RNA-directed RNA polymerase L Tomato spotted wilt virus (strain Brazilian Br-01)
6980P28976 2404 2409 EAFGNL 2 WxxL RNA-directed RNA polymerase L Tomato spotted wilt virus (strain Brazilian Br-01)
6981P28976 2463 2468 ELFENL 6 WxxL RNA-directed RNA polymerase L Tomato spotted wilt virus (strain Brazilian Br-01)
6982P28976 2477 2482 NEYSPL 9 WxxL RNA-directed RNA polymerase L Tomato spotted wilt virus (strain Brazilian Br-01)
6983P28976 2498 2503 EGFKEI 10 WxxL RNA-directed RNA polymerase L Tomato spotted wilt virus (strain Brazilian Br-01)
6984P28976 2507 2512 LKYSLI 6 WxxL RNA-directed RNA polymerase L Tomato spotted wilt virus (strain Brazilian Br-01)
6985P28976 2540 2545 GEFNLL 8 WxxL RNA-directed RNA polymerase L Tomato spotted wilt virus (strain Brazilian Br-01)
6986P28976 2601 2606 YDFKTL 11 WxxL RNA-directed RNA polymerase L Tomato spotted wilt virus (strain Brazilian Br-01)
6987P28976 2640 2645 EEFVGL 11 WxxL RNA-directed RNA polymerase L Tomato spotted wilt virus (strain Brazilian Br-01)
6988P28976 2646 2651 ASFNVL 8 WxxL RNA-directed RNA polymerase L Tomato spotted wilt virus (strain Brazilian Br-01)
6989P28976 2657 2662 EMYEGL 11 WxxL RNA-directed RNA polymerase L Tomato spotted wilt virus (strain Brazilian Br-01)
6990P28976 2731 2736 KVYATV 4 WxxL RNA-directed RNA polymerase L Tomato spotted wilt virus (strain Brazilian Br-01)
6991P28976 2738 2743 MEYKNV 5 WxxL RNA-directed RNA polymerase L Tomato spotted wilt virus (strain Brazilian Br-01)
6992P28976 2792 2797 EVYKDI 6 WxxL RNA-directed RNA polymerase L Tomato spotted wilt virus (strain Brazilian Br-01)
6993P28976 2817 2822 YTYSDI 7 WxxL RNA-directed RNA polymerase L Tomato spotted wilt virus (strain Brazilian Br-01)
6994P31332 294 299 RGFDLL 12 xLIR RNA-directed RNA polymerase L Sonchus yellow net virus
6995P31332 688 693 GEYVPV 12 xLIR RNA-directed RNA polymerase L Sonchus yellow net virus
6996P31332 871 876 RVFTDI 7 xLIR RNA-directed RNA polymerase L Sonchus yellow net virus
6997P31332 1678 1683 ESYLFI 13 xLIR RNA-directed RNA polymerase L Sonchus yellow net virus
6998P31332 1891 1896 KEFETL 13 xLIR RNA-directed RNA polymerase L Sonchus yellow net virus
6999P31332 11 16 KYFQGI 4 WxxL RNA-directed RNA polymerase L Sonchus yellow net virus
7000P31332 63 68 HRFNGL 0 WxxL RNA-directed RNA polymerase L Sonchus yellow net virus

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