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LIR Motif Search
LIR-containing proteins in
Caulimoviridae
>> EXPORT DATA
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S.No.
Uniprot ID
Start
End
LIR sequence
PSSM Score
▲
▼
Pattern
LIR in Anchor
Description
Species
101
P15627
337
342
KKFRKI
5
WxxL
Yes
Capsid protein
Soybean chlorotic mottle virus
102
Q7TD09
227
232
AKFKYI
5
WxxL
No
Capsid protein
Cestrum yellow leaf curling virus
103
Q7TD09
284
289
KYFYML
5
WxxL
No
Capsid protein
Cestrum yellow leaf curling virus
104
Q66283
682
687
CSYYEV
5
WxxL
No
Putative Polyprotein CP
Cassava vein mosaic virus
105
Q66283
1047
1052
LIYQKV
5
WxxL
No
Putative Polyprotein CP
Cassava vein mosaic virus
106
Q66283
1121
1126
PIFQDV
5
WxxL
No
Putative Polyprotein CP
Cassava vein mosaic virus
107
Q66283
1300
1305
INFIGL
5
WxxL
No
Putative Polyprotein CP
Cassava vein mosaic virus
108
P18617
138
143
INYYVV
5
WxxL
Yes
Transactivator/viroplasmin protein
Cauliflower mosaic virus (strain PV147)
109
Q05651
138
143
INYYVV
5
WxxL
Yes
Transactivator/viroplasmin protein
Cauliflower mosaic virus (strain W260)
110
Q02954
138
143
INYYVV
5
WxxL
Yes
Transactivator/viroplasmin protein
Cauliflower mosaic virus (strain BBC)
111
P05401
343
348
DYYNGL
5
WxxL
No
Transactivator/viroplasmin protein
Carnation etched ring virus
112
P16666
412
417
KIFVNL
5
WxxL
No
Transactivator/viroplasmin protein
Cauliflower mosaic virus (strain Bari 1)
113
P03558
138
143
INYYVV
5
WxxL
No
Transactivator/viroplasmin protein
Cauliflower mosaic virus (strain CM-1841)
114
P09524
226
231
LKFKAI
5
WxxL
No
Transactivator/viroplasmin protein
Figwort mosaic virus (strain DxS)
115
P03557
138
143
INYYVV
5
WxxL
Yes
Transactivator/viroplasmin protein
Cauliflower mosaic virus (strain D/H)
116
P22547
138
143
INYYVV
5
WxxL
Yes
Transactivator/viroplasmin protein
Cauliflower mosaic virus (strain D4)
117
Q00957
138
143
INYYVV
5
WxxL
Yes
Transactivator/viroplasmin protein
Cauliflower mosaic virus (strain NY8153)
118
Q7TD13
87
92
HIYDQI
5
WxxL
No
Putative movement protein
Cestrum yellow leaf curling virus
119
P15631
221
226
ELFSEV
5
WxxL
No
Movement protein
Soybean chlorotic mottle virus
120
P09520
243
248
EVFKDI
5
WxxL
No
Movement protein
Figwort mosaic virus (strain DxS)
121
P27499
13
18
EKFKNL
5
WxxL
No
Protein P2
Rice tungro bacilliform virus (isolate Philippines)
122
P03556
338
343
SGFWQV
5
WxxL
No
Enzymatic polyprotein
Cauliflower mosaic virus (strain D/H)
123
P03556
440
445
INFLGL
5
WxxL
No
Enzymatic polyprotein
Cauliflower mosaic virus (strain D/H)
124
P03556
527
532
QGFPPL
5
WxxL
No
Enzymatic polyprotein
Cauliflower mosaic virus (strain D/H)
125
Q02964
343
348
SGFWQV
5
WxxL
No
Enzymatic polyprotein
Cauliflower mosaic virus (strain BBC)
126
Q02964
445
450
INFLGL
5
WxxL
No
Enzymatic polyprotein
Cauliflower mosaic virus (strain BBC)
127
Q02964
532
537
QGFPPL
5
WxxL
No
Enzymatic polyprotein
Cauliflower mosaic virus (strain BBC)
128
Q89703
381
386
AKFRDI
5
WxxL
No
Putative enzymatic polyprotein
Cassava vein mosaic virus
129
Q89703
563
568
AVYQGL
5
WxxL
No
Putative enzymatic polyprotein
Cassava vein mosaic virus
130
Q91DM0
486
491
YMFNPL
5
WxxL
Yes
Genome polyprotein
Petunia vein clearing virus (isolate Shepherd)
131
Q91DM0
1620
1625
QQFLGI
5
WxxL
No
Genome polyprotein
Petunia vein clearing virus (isolate Shepherd)
132
Q91DM0
2073
2078
PAYSKV
5
WxxL
No
Genome polyprotein
Petunia vein clearing virus (isolate Shepherd)
133
P19199
543
548
PAFKHL
5
WxxL
Yes
Polyprotein P3
Commelina yellow mottle virus
134
P19199
961
966
SKFGDL
5
WxxL
No
Polyprotein P3
Commelina yellow mottle virus
135
P19199
1044
1049
EAYHDV
5
WxxL
No
Polyprotein P3
Commelina yellow mottle virus
136
P19199
1311
1316
ITFYKL
5
WxxL
No
Polyprotein P3
Commelina yellow mottle virus
137
P19199
1506
1511
SGFWQV
5
WxxL
No
Polyprotein P3
Commelina yellow mottle virus
138
P19199
1528
1533
KLYEWL
5
WxxL
No
Polyprotein P3
Commelina yellow mottle virus
139
Q6XKE6
487
492
YMFNPL
5
WxxL
Yes
Genome polyprotein
Petunia vein clearing virus (isolate Hohn)
140
Q6XKE6
1621
1626
QQFLGI
5
WxxL
No
Genome polyprotein
Petunia vein clearing virus (isolate Hohn)
141
Q6XKE6
2074
2079
PAYSKV
5
WxxL
No
Genome polyprotein
Petunia vein clearing virus (isolate Hohn)
142
P03555
343
348
SGFWQV
5
WxxL
No
Enzymatic polyprotein
Cauliflower mosaic virus (strain CM-1841)
143
P03555
445
450
INFLGL
5
WxxL
No
Enzymatic polyprotein
Cauliflower mosaic virus (strain CM-1841)
144
P03555
532
537
QGFPPL
5
WxxL
No
Enzymatic polyprotein
Cauliflower mosaic virus (strain CM-1841)
145
P05400
120
125
RIYFHL
5
WxxL
No
Enzymatic polyprotein
Carnation etched ring virus
146
P05400
429
434
INFLGL
5
WxxL
No
Enzymatic polyprotein
Carnation etched ring virus
147
P05400
606
611
THFVNI
5
WxxL
No
Enzymatic polyprotein
Carnation etched ring virus
148
P03554
343
348
SGFWQV
5
WxxL
No
Enzymatic polyprotein
Cauliflower mosaic virus (strain Strasbourg)
149
P03554
445
450
INFLGL
5
WxxL
No
Enzymatic polyprotein
Cauliflower mosaic virus (strain Strasbourg)
150
P03554
532
537
QGFPPL
5
WxxL
No
Enzymatic polyprotein
Cauliflower mosaic virus (strain Strasbourg)
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Ioannis Nezis lab
|
University of Warwick