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LIR Motif Search
LIR-containing proteins in
Caulimoviridae
>> EXPORT DATA
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S.No.
Uniprot ID
Start
End
LIR sequence
PSSM Score
▲
▼
Pattern
LIR in Anchor
Description
Species
301
Q7TD08
299
304
SGYWQL
7
WxxL
No
Enzymatic polyprotein
Cestrum yellow leaf curling virus
302
P27502
673
678
RLFDRL
7
WxxL
No
Polyprotein P3
Rice tungro bacilliform virus (isolate Philippines)
303
P27502
1034
1039
LQFQEV
7
WxxL
No
Polyprotein P3
Rice tungro bacilliform virus (isolate Philippines)
304
P27502
1328
1333
ESFGDL
7
WxxL
No
Polyprotein P3
Rice tungro bacilliform virus (isolate Philippines)
305
P27502
1383
1388
VEYLGV
7
WxxL
No
Polyprotein P3
Rice tungro bacilliform virus (isolate Philippines)
306
P15629
19
24
VTFIKV
7
WxxL
No
Enzymatic polyprotein
Soybean chlorotic mottle virus
307
P15630
90
95
LSFLCL
7
WxxL
No
Uncharacterized protein 2
Soybean chlorotic mottle virus
308
Q89635
54
59
TTYKRI
7
WxxL
No
Uncharacterized 9 kDa protein
Cassava vein mosaic virus
309
P15627
210
215
NNYYKL
6
WxxL
No
Capsid protein
Soybean chlorotic mottle virus
310
Q00956
450
455
APYEGV
6
WxxL
Yes
Capsid protein
Cauliflower mosaic virus (strain NY8153)
311
Q66283
917
922
EKFKQI
6
WxxL
No
Putative Polyprotein CP
Cassava vein mosaic virus
312
Q66283
1219
1224
KQFHII
6
WxxL
No
Putative Polyprotein CP
Cassava vein mosaic virus
313
P18617
171
176
KKFATI
6
WxxL
No
Transactivator/viroplasmin protein
Cauliflower mosaic virus (strain PV147)
314
Q7TBL3
182
187
KKFYVL
6
WxxL
Yes
Transactivator/viroplasmin protein
Cestrum yellow leaf curling virus
315
Q05651
171
176
KKFATI
6
WxxL
No
Transactivator/viroplasmin protein
Cauliflower mosaic virus (strain W260)
316
Q02954
171
176
KKFATI
6
WxxL
No
Transactivator/viroplasmin protein
Cauliflower mosaic virus (strain BBC)
317
P05401
11
16
IAFLEL
6
WxxL
Yes
Transactivator/viroplasmin protein
Carnation etched ring virus
318
P05401
395
400
EFFQAI
6
WxxL
No
Transactivator/viroplasmin protein
Carnation etched ring virus
319
P03559
138
143
TNYYVV
6
WxxL
Yes
Transactivator/viroplasmin protein
Cauliflower mosaic virus (strain Strasbourg)
320
P03559
171
176
KKFATI
6
WxxL
No
Transactivator/viroplasmin protein
Cauliflower mosaic virus (strain Strasbourg)
321
P16666
172
177
KKFATI
6
WxxL
No
Transactivator/viroplasmin protein
Cauliflower mosaic virus (strain Bari 1)
322
P13218
138
143
TNYYVV
6
WxxL
Yes
Transactivator/viroplasmin protein
Cauliflower mosaic virus (strain S-Japan)
323
P13218
171
176
KKFATI
6
WxxL
No
Transactivator/viroplasmin protein
Cauliflower mosaic virus (strain S-Japan)
324
P03558
171
176
KKFATI
6
WxxL
No
Transactivator/viroplasmin protein
Cauliflower mosaic virus (strain CM-1841)
325
P09524
330
335
AIFIKI
6
WxxL
No
Transactivator/viroplasmin protein
Figwort mosaic virus (strain DxS)
326
P03557
171
176
KKFATI
6
WxxL
No
Transactivator/viroplasmin protein
Cauliflower mosaic virus (strain D/H)
327
P22547
171
176
KKFATI
6
WxxL
No
Transactivator/viroplasmin protein
Cauliflower mosaic virus (strain D4)
328
Q00957
171
176
KKFATI
6
WxxL
No
Transactivator/viroplasmin protein
Cauliflower mosaic virus (strain NY8153)
329
P15631
39
44
NKFKEL
6
WxxL
No
Movement protein
Soybean chlorotic mottle virus
330
P09520
95
100
QVYLPL
6
WxxL
No
Movement protein
Figwort mosaic virus (strain DxS)
331
P27501
152
157
SYYSHL
6
WxxL
No
Protein P4
Rice tungro bacilliform virus (isolate Philippines)
332
Q89703
101
106
NKYSPI
6
WxxL
No
Putative enzymatic polyprotein
Cassava vein mosaic virus
333
Q91DM0
120
125
HQFTHI
6
WxxL
No
Genome polyprotein
Petunia vein clearing virus (isolate Shepherd)
334
Q91DM0
174
179
TVFITL
6
WxxL
No
Genome polyprotein
Petunia vein clearing virus (isolate Shepherd)
335
Q91DM0
239
244
ALFLKI
6
WxxL
No
Genome polyprotein
Petunia vein clearing virus (isolate Shepherd)
336
Q91DM0
1139
1144
QKYTGI
6
WxxL
No
Genome polyprotein
Petunia vein clearing virus (isolate Shepherd)
337
Q91DM0
1298
1303
DIYRQL
6
WxxL
No
Genome polyprotein
Petunia vein clearing virus (isolate Shepherd)
338
Q91DM0
1482
1487
SGFWQL
6
WxxL
No
Genome polyprotein
Petunia vein clearing virus (isolate Shepherd)
339
Q91DM0
1528
1533
KIFQPI
6
WxxL
No
Genome polyprotein
Petunia vein clearing virus (isolate Shepherd)
340
P19199
806
811
RVYFTI
6
WxxL
No
Polyprotein P3
Commelina yellow mottle virus
341
P19199
930
935
EIFSVL
6
WxxL
No
Polyprotein P3
Commelina yellow mottle virus
342
P19199
1124
1129
RVFSTI
6
WxxL
No
Polyprotein P3
Commelina yellow mottle virus
343
Q6XKE6
121
126
HQFTHI
6
WxxL
No
Genome polyprotein
Petunia vein clearing virus (isolate Hohn)
344
Q6XKE6
175
180
TVFITL
6
WxxL
No
Genome polyprotein
Petunia vein clearing virus (isolate Hohn)
345
Q6XKE6
240
245
ALFLKI
6
WxxL
No
Genome polyprotein
Petunia vein clearing virus (isolate Hohn)
346
Q6XKE6
1140
1145
QKYTGI
6
WxxL
No
Genome polyprotein
Petunia vein clearing virus (isolate Hohn)
347
Q6XKE6
1299
1304
DIYRQL
6
WxxL
No
Genome polyprotein
Petunia vein clearing virus (isolate Hohn)
348
Q6XKE6
1483
1488
SGFWQL
6
WxxL
No
Genome polyprotein
Petunia vein clearing virus (isolate Hohn)
349
Q6XKE6
1529
1534
KIFQPI
6
WxxL
No
Genome polyprotein
Petunia vein clearing virus (isolate Hohn)
350
P05400
516
521
KSFPKL
6
WxxL
No
Enzymatic polyprotein
Carnation etched ring virus
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Ioannis Nezis lab
|
University of Warwick