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LIR Motif Search
LIR-containing proteins in
Coronaviridae
>> EXPORT DATA
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S.No.
Uniprot ID
Start
End
LIR sequence
PSSM Score
▲
▼
Pattern
LIR in Anchor
Description
Species
601
Q02915
309
314
PQFPIL
5
WxxL
Yes
Nucleoprotein
Rat coronavirus (strain 681)
602
Q9J4B0
34
39
SWFQAI
6
WxxL
Yes
Nucleoprotein
Avian infectious bronchitis virus (strain DE072)
603
Q9J4B0
153
158
FRWDFI
17
WxxL
Yes
Nucleoprotein
Avian infectious bronchitis virus (strain DE072)
604
Q9J4B0
300
305
IEFTTV
9
WxxL
Yes
Nucleoprotein
Avian infectious bronchitis virus (strain DE072)
605
Q9J4B0
314
319
DNYVKI
14
WxxL
Yes
Nucleoprotein
Avian infectious bronchitis virus (strain DE072)
606
Q0Q468
51
56
SWFTAL
6
WxxL
Yes
Nucleoprotein
Bat coronavirus 279/2005
607
Q0Q468
108
113
WYFYYL
-1
WxxL
Yes
Nucleoprotein
Bat coronavirus 279/2005
608
Q0Q468
299
304
KYWPQI
8
WxxL
Yes
Nucleoprotein
Bat coronavirus 279/2005
609
Q8V432
364
369
SGFETI
13
xLIR
Yes
Nucleoprotein
Bovine coronavirus (strain 98TXSF-110-LUN)
610
Q8V432
64
69
SWFSGI
2
WxxL
Yes
Nucleoprotein
Bovine coronavirus (strain 98TXSF-110-LUN)
611
Q8V432
123
128
WYFYYL
-1
WxxL
Yes
Nucleoprotein
Bovine coronavirus (strain 98TXSF-110-LUN)
612
Q8V432
308
313
PQFPIL
5
WxxL
No
Nucleoprotein
Bovine coronavirus (strain 98TXSF-110-LUN)
613
P18447
363
368
PGFETI
12
xLIR
Yes
Nucleoprotein
Murine coronavirus (strain 3)
614
P18447
67
72
SWFSGI
2
WxxL
Yes
Nucleoprotein
Murine coronavirus (strain 3)
615
P18447
126
131
WYFYYL
-1
WxxL
Yes
Nucleoprotein
Murine coronavirus (strain 3)
616
P18447
309
314
PQFPIL
5
WxxL
Yes
Nucleoprotein
Murine coronavirus (strain 3)
617
P04134
34
39
SFFNPI
3
WxxL
Yes
Nucleoprotein
Porcine transmissible gastroenteritis coronavirus (strain Purdue)
618
P04134
45
50
SKFWNL
3
WxxL
Yes
Nucleoprotein
Porcine transmissible gastroenteritis coronavirus (strain Purdue)
619
P04134
74
79
TRYRMV
5
WxxL
No
Nucleoprotein
Porcine transmissible gastroenteritis coronavirus (strain Purdue)
620
P04134
90
95
WFFYYL
-2
WxxL
Yes
Nucleoprotein
Porcine transmissible gastroenteritis coronavirus (strain Purdue)
621
P04134
272
277
KHYPQL
3
WxxL
Yes
Nucleoprotein
Porcine transmissible gastroenteritis coronavirus (strain Purdue)
622
P04134
363
368
ENYTDV
10
WxxL
Yes
Nucleoprotein
Porcine transmissible gastroenteritis coronavirus (strain Purdue)
623
P59713
363
368
PGFETI
12
xLIR
Yes
Nucleoprotein
Puffinosis coronavirus
624
P59713
67
72
SWFSGI
2
WxxL
Yes
Nucleoprotein
Puffinosis coronavirus
625
P59713
126
131
WYFYYL
-1
WxxL
Yes
Nucleoprotein
Puffinosis coronavirus
626
P59713
309
314
PQFPIL
5
WxxL
No
Nucleoprotein
Puffinosis coronavirus
627
P69596
300
305
FEFTTV
12
xLIR
Yes
Nucleoprotein
Avian infectious bronchitis virus (strain Beaudette)
628
P69596
34
39
SWFQAI
6
WxxL
Yes
Nucleoprotein
Avian infectious bronchitis virus (strain Beaudette)
629
P69596
153
158
FRWDFI
17
WxxL
Yes
Nucleoprotein
Avian infectious bronchitis virus (strain Beaudette)
630
P69596
314
319
DNYVKI
14
WxxL
Yes
Nucleoprotein
Avian infectious bronchitis virus (strain Beaudette)
631
Q99H66
90
95
LVFLAV
4
xLIR
No
Non-structural protein of 12.7 kDa
Bovine coronavirus (strain Ontario)
632
Q99H66
31
36
YKFPKV
1
WxxL
No
Non-structural protein of 12.7 kDa
Bovine coronavirus (strain Ontario)
633
Q99H66
67
72
DKYFGV
6
WxxL
No
Non-structural protein of 12.7 kDa
Bovine coronavirus (strain Ontario)
634
Q0ZME6
8
13
YKYSLI
5
WxxL
No
Non-structural protein 4
Human coronavirus HKU1 (isolate N5)
635
Q0ZME6
36
41
VGYCIV
5
WxxL
No
Non-structural protein 4
Human coronavirus HKU1 (isolate N5)
636
Q0ZME6
54
59
ASYFVL
9
WxxL
No
Non-structural protein 4
Human coronavirus HKU1 (isolate N5)
637
Q0ZME6
68
73
NNFGVI
5
WxxL
No
Non-structural protein 4
Human coronavirus HKU1 (isolate N5)
638
P0C2R3
25
30
LNYKGL
5
WxxL
No
Non-structural protein 2a
Bovine coronavirus (strain LSU-94LSS-051)
639
P0C2R3
59
64
EDYRSV
12
WxxL
No
Non-structural protein 2a
Bovine coronavirus (strain LSU-94LSS-051)
640
P0C2R3
180
185
GFYETI
8
WxxL
No
Non-structural protein 2a
Bovine coronavirus (strain LSU-94LSS-051)
641
P0C2R3
187
192
SHWMGI
11
WxxL
No
Non-structural protein 2a
Bovine coronavirus (strain LSU-94LSS-051)
642
P0C2R3
230
235
DAWFKL
14
WxxL
No
Non-structural protein 2a
Bovine coronavirus (strain LSU-94LSS-051)
643
P0C2R3
244
249
WFFRHV
-2
WxxL
No
Non-structural protein 2a
Bovine coronavirus (strain LSU-94LSS-051)
644
P30238
6
11
TSFLIV
9
WxxL
No
Non-structural protein 3a
Avian infectious bronchitis virus (strain Portugal/322/82)
645
P30238
14
19
LLWCKL
8
WxxL
No
Non-structural protein 3a
Avian infectious bronchitis virus (strain Portugal/322/82)
646
P30238
51
56
LLWHSL
9
WxxL
No
Non-structural protein 3a
Avian infectious bronchitis virus (strain Portugal/322/82)
647
P30239
6
11
TSFLIV
9
WxxL
No
Non-structural protein 3a
Avian infectious bronchitis virus (strain UK/68/84)
648
P30239
14
19
LLWCKL
8
WxxL
No
Non-structural protein 3a
Avian infectious bronchitis virus (strain UK/68/84)
649
P30239
26
31
ECFVAL
8
WxxL
No
Non-structural protein 3a
Avian infectious bronchitis virus (strain UK/68/84)
650
P30239
51
56
LLWHSL
9
WxxL
No
Non-structural protein 3a
Avian infectious bronchitis virus (strain UK/68/84)
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Ioannis Nezis lab
|
University of Warwick