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iLIR Database
LIR Motif Search
LIR-containing proteins in
Coronaviridae
>> EXPORT DATA
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S.No.
Uniprot ID
Start
End
LIR sequence
PSSM Score
▲
▼
Pattern
LIR in Anchor
Description
Species
151
P0C6U4
2359
2364
FDYVSL
17
xLIR
No
Replicase polyprotein 1a
Human coronavirus HKU1 (isolate N2)
152
P0C6U5
860
865
DDFVAV
17
xLIR
No
Replicase polyprotein 1a
Human coronavirus HKU1 (isolate N5)
153
P0C6U5
1459
1464
EDFDII
17
xLIR
No
Replicase polyprotein 1a
Human coronavirus HKU1 (isolate N5)
154
P0C6U5
2339
2344
FDYVSL
17
xLIR
No
Replicase polyprotein 1a
Human coronavirus HKU1 (isolate N5)
155
P0C6U9
1499
1504
ADWRLV
17
WxxL
No
Replicase polyprotein 1a
Murine coronavirus (strain 2)
156
P0C6W4
811
816
GDYVII
17
xLIR
No
Replicase polyprotein 1ab
Bat coronavirus HKU5
157
P0C6W4
2688
2693
DDFQTV
17
xLIR
No
Replicase polyprotein 1ab
Bat coronavirus HKU5
158
P0C6W4
3910
3915
NSWEAL
17
WxxL
No
Replicase polyprotein 1ab
Bat coronavirus HKU5
159
P0C6X1
491
496
FDYVLL
17
xLIR
No
Replicase polyprotein 1ab
Human coronavirus 229E
160
P0C6X1
6412
6417
DDFVSV
17
xLIR
No
Replicase polyprotein 1ab
Human coronavirus 229E
161
K9N7C7
813
818
GDYVII
17
xLIR
No
Replicase polyprotein 1ab
Human coronavirus EMC (isolate United Kingdom/H123990006/2012)
162
K9N638
813
818
GDYVII
17
xLIR
No
Replicase polyprotein 1a
Human coronavirus EMC (isolate United Kingdom/H123990006/2012)
163
P0C6U3
860
865
DDFVAV
17
xLIR
No
Replicase polyprotein 1a
Human coronavirus HKU1 (isolate N1)
164
P0C6U3
1509
1514
EDFDII
17
xLIR
No
Replicase polyprotein 1a
Human coronavirus HKU1 (isolate N1)
165
P0C6U3
2389
2394
FDYVSL
17
xLIR
No
Replicase polyprotein 1a
Human coronavirus HKU1 (isolate N1)
166
Q008X5
1044
1049
GGWVLV
17
xLIR
Yes
Replicase polyprotein 1a
White bream virus (isolate Blicca bjoerkna L./Germany/DF24/00)
167
P0C6U8
2207
2212
AMWLLL
17
xLIR
No
Replicase polyprotein 1a
Human SARS coronavirus
168
P0C6V8
6562
6567
KDYDTL
17
xLIR
No
Replicase polyprotein 1ab
Breda virus 1
169
P0C6X2
860
865
DDFVAV
17
xLIR
No
Replicase polyprotein 1ab
Human coronavirus HKU1 (isolate N1)
170
P0C6X2
1509
1514
EDFDII
17
xLIR
No
Replicase polyprotein 1ab
Human coronavirus HKU1 (isolate N1)
171
P0C6X2
2389
2394
FDYVSL
17
xLIR
No
Replicase polyprotein 1ab
Human coronavirus HKU1 (isolate N1)
172
P0C6X3
860
865
DDFVAV
17
xLIR
No
Replicase polyprotein 1ab
Human coronavirus HKU1 (isolate N2)
173
P0C6X3
1479
1484
EDFDII
17
xLIR
No
Replicase polyprotein 1ab
Human coronavirus HKU1 (isolate N2)
174
P0C6X3
2359
2364
FDYVSL
17
xLIR
No
Replicase polyprotein 1ab
Human coronavirus HKU1 (isolate N2)
175
P0C6Y5
3567
3572
PSWIAL
17
xLIR
No
Replicase polyprotein 1ab
Porcine transmissible gastroenteritis coronavirus (strain Purdue)
176
P0C6Y5
5815
5820
VDWSIV
17
WxxL
No
Replicase polyprotein 1ab
Porcine transmissible gastroenteritis coronavirus (strain Purdue)
177
P0C6X7
2207
2212
AMWLLL
17
xLIR
No
Replicase polyprotein 1ab
Human SARS coronavirus
178
P0C6F6
944
949
GDWSNL
17
WxxL
No
Replicase polyprotein 1a
Bat coronavirus 512/2005
179
P0C6F5
2213
2218
AMWLLL
17
xLIR
No
Replicase polyprotein 1a
Bat coronavirus 279/2005
180
P0C6T5
811
816
GDYVII
17
xLIR
No
Replicase polyprotein 1a
Bat coronavirus HKU5
181
P0C6T5
2688
2693
DDFQTV
17
xLIR
No
Replicase polyprotein 1a
Bat coronavirus HKU5
182
P0C6T5
3910
3915
NSWEAL
17
WxxL
No
Replicase polyprotein 1a
Bat coronavirus HKU5
183
P0C6V2
3567
3572
PSWIAL
17
xLIR
No
Replicase polyprotein 1a
Porcine transmissible gastroenteritis coronavirus (strain Purdue)
184
P0C6V9
2213
2218
AMWLLL
17
xLIR
No
Replicase polyprotein 1ab
Bat coronavirus 279/2005
185
P0C6W6
2205
2210
AMWLLL
17
xLIR
No
Replicase polyprotein 1ab
Bat coronavirus Rp3/2004
186
Q98VG9
5840
5845
VDWSIV
17
WxxL
No
Replicase polyprotein 1ab
Feline coronavirus (strain FIPV WSU-79/1146)
187
P0C6W0
944
949
GDWSNL
17
WxxL
No
Replicase polyprotein 1ab
Bat coronavirus 512/2005
188
P0C6W1
461
466
GTWDKV
17
xLIR
No
Replicase polyprotein 1ab
Bat coronavirus 133/2005
189
P0C6W1
2649
2654
DDFQTV
17
xLIR
No
Replicase polyprotein 1ab
Bat coronavirus 133/2005
190
P0C6W1
3870
3875
NSWEAL
17
WxxL
No
Replicase polyprotein 1ab
Bat coronavirus 133/2005
191
P0C6X4
860
865
DDFVAV
17
xLIR
No
Replicase polyprotein 1ab
Human coronavirus HKU1 (isolate N5)
192
P0C6X4
1459
1464
EDFDII
17
xLIR
No
Replicase polyprotein 1ab
Human coronavirus HKU1 (isolate N5)
193
P0C6X4
2339
2344
FDYVSL
17
xLIR
No
Replicase polyprotein 1ab
Human coronavirus HKU1 (isolate N5)
194
P0C6T7
2205
2210
AMWLLL
17
xLIR
No
Replicase polyprotein 1a
Bat coronavirus Rp3/2004
195
P0C6U2
491
496
FDYVLL
17
xLIR
No
Replicase polyprotein 1a
Human coronavirus 229E
196
P09175
56
61
FSWSII
17
WxxL
No
Membrane protein
Porcine transmissible gastroenteritis coronavirus (strain FS772/70)
197
Q7T6S9
56
61
FSWSVI
17
WxxL
No
Membrane protein
Canine coronavirus (strain BGF10)
198
P24412
56
61
FSWSII
17
WxxL
No
Membrane protein
Porcine respiratory coronavirus (strain RM4)
199
P36299
56
61
FSWSVI
17
WxxL
No
Membrane protein
Canine coronavirus (strain Insavc-1)
200
P33464
56
61
FSWSII
17
WxxL
No
Membrane protein
Porcine respiratory coronavirus (strain 86/137004 / isolate British)
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Ioannis Nezis lab
|
University of Warwick