iLIR
@Viral
Home
Classification
ICTV
Caudovirales
Myoviridae
Podoviridae
Siphoviridae
Herpesvirales
Alloherpesviridae
Herpesviridae
Malacoherpesviridae
Ligamenvirales
Lipothrixviridae
Rudiviridae
Mononegavirales
Bornaviridae
Filoviridae
Mymonaviridae
Nyamiviridae
Paramyxoviridae
Pneumoviridae
Rhabdoviridae
Sunviridae
Unassigned
Nidovirales
Arteriviridae
Coronaviridae
Mesoniviridae
Roniviridae
Picornavirales
Dicistroviridae
Iflaviridae
Marnaviridae
Picornaviridae
Secoviridae
Unassigned
Tymovirales
Alphaflexiviridae
Betaflexiviridae
Gammaflexiviridae
Tymoviridae
Unassigned order
Baltimore system
dsDNA
Caudovirales
Myoviridae
Podoviridae
Siphoviridae
Herpesvirales
Alloherpesviridae
Herpesviridae
Malacoherpesviridae
Ligamenvirales
Lipothrixviridae
Rudiviridae
Unassigned order
dsRNA
Unassigned order
Amalgaviridae
Birnaviridae
Chrysoviridae
Cystoviridae
Endornaviridae
Hypoviridae
Megabirnaviridae
Partitiviridae
Picobirnaviridae
Quadriviridae
Reoviridae
Totiviridae
ssDNA
Unassigned order
Anelloviridae
Bidnaviridae
Circoviridae
Geminiviridae
Inoviridae
Nanoviridae
Microviridae
Mycodnaviridae
Parvoviridae
Pleolipoviridae
Spiraviridae
ssRNA (+)
Tymovirales
Alphaflexiviridae
Betaflexiviridae
Gammaflexiviridae
Tymoviridae
Picornavirales
Dicistroviridae
Picornaviridae
Secoviridae
Nidovirales
Arteriviridae
Coronaviridae
Mesoniviridae
Roniviridae
ssRNA (-)
Mononegavirales
Bornaviridae
Rhadbdoviridae
Filoviridae
Nyamaviridae
Paramyxoviridae
Unassigned order
Arenaviridae
Bunyaviridae
Ophioviridae
Orthomyxoviridae
ssRNA-RT
Retroviridae
dsDNA-RT
Caulimoviridae
Hepadnaviridae
Search
BLAST
ICTV
Baltimore system
Bibliography
Help
Links
iLIR Database
LIR Motif Search
LIR-containing proteins in
Geminiviridae
>> EXPORT DATA
<< prev
1
2
3
4
5
6
7
...
17
18
next >>
S.No.
Uniprot ID
Start
End
LIR sequence
PSSM Score
▲
▼
Pattern
LIR in Anchor
Description
Species
201
P31618
15
20
TKYVFL
10
WxxL
No
Replication-associated protein
Tobacco yellow dwarf virus (strain Australia)
202
P31618
262
267
PLWKQL
10
WxxL
No
Replication-associated protein
Tobacco yellow dwarf virus (strain Australia)
203
Q91MF8
275
280
PCWKQL
10
WxxL
No
Replication-associated protein
Maize streak virus genotype D (isolate Raw)
204
Q80GM6
266
271
AEYNII
10
WxxL
No
Replication-associated protein
Sugarcane streak virus (isolate South Africa)
205
Q80GM6
280
285
PCWKQL
10
WxxL
No
Replication-associated protein
Sugarcane streak virus (isolate South Africa)
206
P38609
187
192
SSFDQV
10
WxxL
No
Replication-associated protein
Tomato yellow leaf curl Sardinia virus (isolate Spain-1)
207
Q9DXE5
187
192
SSFDQV
10
WxxL
No
Replication-associated protein
Tomato yellow leaf curl China virus
208
Q67622
121
126
GTFVAV
10
xLIR
No
Replication-associated protein
Wheat dwarf virus (isolate Sweden)
209
P06847
121
126
GTFVAV
10
xLIR
No
Replication-associated protein A
Wheat dwarf virus (isolate Sweden)
210
P0CK39
187
192
SSFVNI
10
WxxL
No
Replication-associated protein
Bean golden yellow mosaic virus (isolate Puerto Rico)
211
P0CK39
245
250
LDFNSL
10
WxxL
No
Replication-associated protein
Bean golden yellow mosaic virus (isolate Puerto Rico)
212
P0CK39
266
271
PNYLKL
10
WxxL
No
Replication-associated protein
Bean golden yellow mosaic virus (isolate Puerto Rico)
213
P14982
186
191
SSFDQV
10
WxxL
No
Replication-associated protein
African cassava mosaic virus (isolate West Kenyan 844)
214
P03567
335
340
AKFVFL
10
WxxL
No
Replication-associated protein
Tomato golden mosaic virus (strain Yellow vein)
215
Q67620
187
192
SSFDQV
10
WxxL
No
Replication-associated protein
Tomato yellow leaf curl Sardinia virus (isolate Spain-2)
216
P14977
86
91
FRYQVI
10
WxxL
No
Replication enhancer protein
African cassava mosaic virus (isolate West Kenyan 844)
217
Q96703
122
127
SFWADI
10
WxxL
No
Transcriptional activator protein
Cabbage leaf curl virus (isolate Jamaica)
218
P38612
37
42
RTFREL
9
WxxL
No
Protein C4
Tomato yellow leaf curl Sardinia virus (isolate Spain-1)
219
P36283
39
44
RTFREL
9
WxxL
Yes
Protein C4
Tomato leaf curl virus (strain Australia)
220
Q67621
37
42
RTFREL
9
WxxL
No
Protein C4
Tomato yellow leaf curl Sardinia virus (isolate Spain-2)
221
P0DJX3
31
36
RTFREL
9
WxxL
Yes
Protein AC4
Bean golden yellow mosaic virus (isolate Puerto Rico-Japan)
222
P0C6G4
39
44
RTFREL
9
WxxL
Yes
Protein AC4
Pepper huasteco yellow vein virus
223
P0C6G3
37
42
RTFREL
9
WxxL
Yes
Protein AC4
Potato yellow mosaic virus (isolate Venezuela)
224
Q9QDJ8
37
42
RTFREL
9
WxxL
Yes
Protein C4
Tomato yellow leaf curl China virus
225
P0C6G0
31
36
RTFREL
9
WxxL
Yes
Protein AC4
Bean golden yellow mosaic virus (isolate Puerto Rico)
226
P27272
39
44
RTFREL
9
WxxL
No
Protein C4
Tomato yellow leaf curl Sardinia virus
227
Q91J24
37
42
RTFREL
9
WxxL
Yes
Protein C4
Beet curly top virus (strain California/Logan)
228
Q9YPS6
37
42
LGFVYL
9
WxxL
No
Protein AV2
Mungbean yellow mosaic virus (strain Vigna)
229
Q06660
171
176
VDFSHV
9
WxxL
No
Movement protein BC1
Tomato mottle virus (isolate Florida)
230
P03566
171
176
VDFSHV
9
WxxL
No
Movement protein BC1
Tomato golden mosaic virus (strain Yellow vein)
231
Q91MF9
198
203
TQWKNV
9
WxxL
No
Capsid protein
Maize streak virus genotype D (isolate Raw)
232
Q88886
151
156
SRFQVL
9
WxxL
No
Capsid protein
Tomato pseudo-curly top virus
233
Q91MG3
198
203
TQWKNV
9
WxxL
No
Capsid protein
Maize streak virus genotype E (isolate Pat)
234
P06946
138
143
MPWNLL
9
WxxL
No
Capsid protein
Wheat dwarf virus (isolate Sweden)
235
Q9IGY8
198
203
TQWKNV
9
WxxL
No
Capsid protein
Maize streak virus genotype B (isolate Tas)
236
Q08583
150
155
QDFGEV
9
WxxL
No
Capsid protein
Indian cassava mosaic virus
237
P03569
198
203
TQWKNV
9
WxxL
No
Capsid protein
Maize streak virus genotype A (isolate Kenya)
238
P31616
192
197
YQWRHV
9
WxxL
No
Capsid protein
Tobacco yellow dwarf virus (strain Australia)
239
P06448
198
203
TQWKNV
9
WxxL
No
Capsid protein
Maize streak virus genotype A (isolate Nigeria)
240
P14984
217
222
GKYEDV
9
WxxL
No
Capsid protein
Beet curly top virus (strain California/Logan)
241
P14986
198
203
TQWKNV
9
WxxL
No
Capsid protein
Maize streak virus genotype A (isolate South Africa)
242
O40985
198
203
TQWKNV
9
WxxL
No
Capsid protein
Maize streak virus genotype C (isolate Set)
243
P31619
4
9
AKYQVV
9
WxxL
No
Movement protein
Tobacco yellow dwarf virus (strain Australia)
244
P0CK43
171
176
IDFSHV
9
WxxL
No
Movement protein BC1
Bean golden yellow mosaic virus (isolate Puerto Rico)
245
Q96707
171
176
VDFSHV
9
WxxL
No
Movement protein BC1
Cabbage leaf curl virus (isolate Jamaica)
246
Q91MG4
23
28
VPWSHV
9
WxxL
No
Movement protein
Maize streak virus genotype E (isolate Pat)
247
Q89448
29
34
LPWSRV
9
WxxL
No
Movement protein
Sugarcane streak virus (isolate South Africa)
248
Q00336
28
33
LPWSRV
9
WxxL
No
Movement protein
Panicum streak virus (isolate Kenya)
249
P0CK44
171
176
IDFSHV
9
WxxL
No
Movement protein BC1
Bean golden yellow mosaic virus (isolate Puerto Rico-Japan)
250
P21946
171
176
VDFSHV
9
WxxL
No
Movement protein BC1
Abutilon mosaic virus (isolate West India)
Copyright ©
Ioannis Nezis lab
|
University of Warwick