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LIR Motif Search
LIR-containing proteins in
Retroviridae
>> EXPORT DATA
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S.No.
Uniprot ID
Start
End
LIR sequence
PSSM Score
▲
▼
Pattern
LIR in Anchor
Description
Species
5201
P03369
301
306
RFYKTL
6
WxxL
No
Gag-Pol polyprotein
Human immunodeficiency virus type 1 group M subtype B (isolate ARV2/SF2)
5202
P03369
488
493
FNFPQI
5
WxxL
No
Gag-Pol polyprotein
Human immunodeficiency virus type 1 group M subtype B (isolate ARV2/SF2)
5203
P03369
547
552
RQYDQI
10
WxxL
No
Gag-Pol polyprotein
Human immunodeficiency virus type 1 group M subtype B (isolate ARV2/SF2)
5204
P03369
658
663
TKWRKL
11
WxxL
No
Gag-Pol polyprotein
Human immunodeficiency virus type 1 group M subtype B (isolate ARV2/SF2)
5205
P03369
664
669
VDFREL
10
WxxL
No
Gag-Pol polyprotein
Human immunodeficiency virus type 1 group M subtype B (isolate ARV2/SF2)
5206
P03369
674
679
QDFWEV
9
WxxL
No
Gag-Pol polyprotein
Human immunodeficiency virus type 1 group M subtype B (isolate ARV2/SF2)
5207
P03369
702
707
DAYFSV
7
WxxL
No
Gag-Pol polyprotein
Human immunodeficiency virus type 1 group M subtype B (isolate ARV2/SF2)
5208
P03369
733
738
YQYNVL
5
WxxL
No
Gag-Pol polyprotein
Human immunodeficiency virus type 1 group M subtype B (isolate ARV2/SF2)
5209
P03369
858
863
QIYAGI
1
WxxL
No
Gag-Pol polyprotein
Human immunodeficiency virus type 1 group M subtype B (isolate ARV2/SF2)
5210
P03369
933
938
EPFKNL
4
WxxL
No
Gag-Pol polyprotein
Human immunodeficiency virus type 1 group M subtype B (isolate ARV2/SF2)
5211
P03369
970
975
VIWGKI
7
WxxL
No
Gag-Pol polyprotein
Human immunodeficiency virus type 1 group M subtype B (isolate ARV2/SF2)
5212
P03369
1013
1018
KLWYQL
9
WxxL
No
Gag-Pol polyprotein
Human immunodeficiency virus type 1 group M subtype B (isolate ARV2/SF2)
5213
P03369
1246
1251
TAYFLL
4
WxxL
No
Gag-Pol polyprotein
Human immunodeficiency virus type 1 group M subtype B (isolate ARV2/SF2)
5214
P03369
1279
1284
CWWAGI
4
WxxL
No
Gag-Pol polyprotein
Human immunodeficiency virus type 1 group M subtype B (isolate ARV2/SF2)
5215
P03366
551
556
GGFIKV
9
xLIR
No
Gag-Pol polyprotein
Human immunodeficiency virus type 1 group M subtype B (isolate BH10)
5216
P03366
1011
1016
PEWEFV
19
xLIR
No
Gag-Pol polyprotein
Human immunodeficiency virus type 1 group M subtype B (isolate BH10)
5217
P03366
14
19
DRWEKI
18
WxxL
No
Gag-Pol polyprotein
Human immunodeficiency virus type 1 group M subtype B (isolate BH10)
5218
P03366
77
82
SLYNTV
5
WxxL
Yes
Gag-Pol polyprotein
Human immunodeficiency virus type 1 group M subtype B (isolate BH10)
5219
P03366
130
135
QNYPIV
5
WxxL
No
Gag-Pol polyprotein
Human immunodeficiency virus type 1 group M subtype B (isolate BH10)
5220
P03366
153
158
NAWVKV
13
WxxL
Yes
Gag-Pol polyprotein
Human immunodeficiency virus type 1 group M subtype B (isolate BH10)
5221
P03366
170
175
PMFSAL
8
WxxL
Yes
Gag-Pol polyprotein
Human immunodeficiency virus type 1 group M subtype B (isolate BH10)
5222
P03366
210
215
AEWDRV
17
WxxL
No
Gag-Pol polyprotein
Human immunodeficiency virus type 1 group M subtype B (isolate BH10)
5223
P03366
263
268
KRWIIL
15
WxxL
No
Gag-Pol polyprotein
Human immunodeficiency virus type 1 group M subtype B (isolate BH10)
5224
P03366
299
304
RFYKTL
6
WxxL
No
Gag-Pol polyprotein
Human immunodeficiency virus type 1 group M subtype B (isolate BH10)
5225
P03366
498
503
FNFPQI
5
WxxL
Yes
Gag-Pol polyprotein
Human immunodeficiency virus type 1 group M subtype B (isolate BH10)
5226
P03366
557
562
RQYDQI
10
WxxL
No
Gag-Pol polyprotein
Human immunodeficiency virus type 1 group M subtype B (isolate BH10)
5227
P03366
668
673
TKWRKL
11
WxxL
No
Gag-Pol polyprotein
Human immunodeficiency virus type 1 group M subtype B (isolate BH10)
5228
P03366
674
679
VDFREL
10
WxxL
No
Gag-Pol polyprotein
Human immunodeficiency virus type 1 group M subtype B (isolate BH10)
5229
P03366
684
689
QDFWEV
9
WxxL
No
Gag-Pol polyprotein
Human immunodeficiency virus type 1 group M subtype B (isolate BH10)
5230
P03366
712
717
DAYFSV
7
WxxL
No
Gag-Pol polyprotein
Human immunodeficiency virus type 1 group M subtype B (isolate BH10)
5231
P03366
743
748
YQYNVL
5
WxxL
No
Gag-Pol polyprotein
Human immunodeficiency virus type 1 group M subtype B (isolate BH10)
5232
P03366
868
873
QIYPGI
0
WxxL
No
Gag-Pol polyprotein
Human immunodeficiency virus type 1 group M subtype B (isolate BH10)
5233
P03366
943
948
EPFKNL
4
WxxL
No
Gag-Pol polyprotein
Human immunodeficiency virus type 1 group M subtype B (isolate BH10)
5234
P03366
1023
1028
KLWYQL
9
WxxL
No
Gag-Pol polyprotein
Human immunodeficiency virus type 1 group M subtype B (isolate BH10)
5235
P03366
1080
1085
AIYLAL
7
WxxL
No
Gag-Pol polyprotein
Human immunodeficiency virus type 1 group M subtype B (isolate BH10)
5236
P03366
1256
1261
TAYFLL
4
WxxL
No
Gag-Pol polyprotein
Human immunodeficiency virus type 1 group M subtype B (isolate BH10)
5237
P03366
1289
1294
CWWAGI
4
WxxL
No
Gag-Pol polyprotein
Human immunodeficiency virus type 1 group M subtype B (isolate BH10)
5238
Q75002
168
173
PMFTAL
10
xLIR
Yes
Gag-Pol polyprotein
Human immunodeficiency virus type 1 group M subtype C (isolate ETH2220)
5239
Q75002
543
548
GGFIKV
9
xLIR
No
Gag-Pol polyprotein
Human immunodeficiency virus type 1 group M subtype C (isolate ETH2220)
5240
Q75002
1003
1008
PEWEFV
19
xLIR
No
Gag-Pol polyprotein
Human immunodeficiency virus type 1 group M subtype C (isolate ETH2220)
5241
Q75002
14
19
DAWEKI
18
WxxL
No
Gag-Pol polyprotein
Human immunodeficiency virus type 1 group M subtype C (isolate ETH2220)
5242
Q75002
77
82
SLFNTV
4
WxxL
Yes
Gag-Pol polyprotein
Human immunodeficiency virus type 1 group M subtype C (isolate ETH2220)
5243
Q75002
128
133
QNYPIV
5
WxxL
No
Gag-Pol polyprotein
Human immunodeficiency virus type 1 group M subtype C (isolate ETH2220)
5244
Q75002
151
156
NAWVKV
13
WxxL
Yes
Gag-Pol polyprotein
Human immunodeficiency virus type 1 group M subtype C (isolate ETH2220)
5245
Q75002
208
213
AEWDRL
18
WxxL
No
Gag-Pol polyprotein
Human immunodeficiency virus type 1 group M subtype C (isolate ETH2220)
5246
Q75002
261
266
KRWIIL
15
WxxL
No
Gag-Pol polyprotein
Human immunodeficiency virus type 1 group M subtype C (isolate ETH2220)
5247
Q75002
273
278
RMYSPV
9
WxxL
No
Gag-Pol polyprotein
Human immunodeficiency virus type 1 group M subtype C (isolate ETH2220)
5248
Q75002
297
302
RFFKTL
5
WxxL
No
Gag-Pol polyprotein
Human immunodeficiency virus type 1 group M subtype C (isolate ETH2220)
5249
Q75002
490
495
LNFPQI
3
WxxL
Yes
Gag-Pol polyprotein
Human immunodeficiency virus type 1 group M subtype C (isolate ETH2220)
5250
Q75002
549
554
RQYDQI
10
WxxL
No
Gag-Pol polyprotein
Human immunodeficiency virus type 1 group M subtype C (isolate ETH2220)
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Ioannis Nezis lab
|
University of Warwick