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LIR Motif Search
LIR-containing proteins in
Retroviridae
>> EXPORT DATA
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S.No.
Uniprot ID
Start
End
LIR sequence
PSSM Score
▲
▼
Pattern
LIR in Anchor
Description
Species
5501
P03367
1289
1294
CWWAGI
4
WxxL
No
Gag-Pol polyprotein
Human immunodeficiency virus type 1 group M subtype B (isolate BRU/LAI)
5502
P0C6F2
539
544
GGFIKV
9
xLIR
No
Gag-Pol polyprotein
Human immunodeficiency virus type 1 group M subtype B (isolate LW123)
5503
P0C6F2
999
1004
PEWEFV
19
xLIR
No
Gag-Pol polyprotein
Human immunodeficiency virus type 1 group M subtype B (isolate LW123)
5504
P0C6F2
14
19
DRWEKI
18
WxxL
No
Gag-Pol polyprotein
Human immunodeficiency virus type 1 group M subtype B (isolate LW123)
5505
P0C6F2
77
82
SLYNTV
5
WxxL
Yes
Gag-Pol polyprotein
Human immunodeficiency virus type 1 group M subtype B (isolate LW123)
5506
P0C6F2
130
135
QNYPIV
5
WxxL
No
Gag-Pol polyprotein
Human immunodeficiency virus type 1 group M subtype B (isolate LW123)
5507
P0C6F2
153
158
NAWVKV
13
WxxL
Yes
Gag-Pol polyprotein
Human immunodeficiency virus type 1 group M subtype B (isolate LW123)
5508
P0C6F2
170
175
PMFSAL
8
WxxL
Yes
Gag-Pol polyprotein
Human immunodeficiency virus type 1 group M subtype B (isolate LW123)
5509
P0C6F2
210
215
AEWDRV
17
WxxL
No
Gag-Pol polyprotein
Human immunodeficiency virus type 1 group M subtype B (isolate LW123)
5510
P0C6F2
263
268
KRWIIL
15
WxxL
No
Gag-Pol polyprotein
Human immunodeficiency virus type 1 group M subtype B (isolate LW123)
5511
P0C6F2
299
304
RFYKTL
6
WxxL
No
Gag-Pol polyprotein
Human immunodeficiency virus type 1 group M subtype B (isolate LW123)
5512
P0C6F2
486
491
FNFPQI
5
WxxL
Yes
Gag-Pol polyprotein
Human immunodeficiency virus type 1 group M subtype B (isolate LW123)
5513
P0C6F2
545
550
RQYDQI
10
WxxL
No
Gag-Pol polyprotein
Human immunodeficiency virus type 1 group M subtype B (isolate LW123)
5514
P0C6F2
656
661
TKWRKL
11
WxxL
No
Gag-Pol polyprotein
Human immunodeficiency virus type 1 group M subtype B (isolate LW123)
5515
P0C6F2
662
667
VDFREL
10
WxxL
No
Gag-Pol polyprotein
Human immunodeficiency virus type 1 group M subtype B (isolate LW123)
5516
P0C6F2
672
677
QDFWEV
9
WxxL
No
Gag-Pol polyprotein
Human immunodeficiency virus type 1 group M subtype B (isolate LW123)
5517
P0C6F2
700
705
DAYFSV
7
WxxL
No
Gag-Pol polyprotein
Human immunodeficiency virus type 1 group M subtype B (isolate LW123)
5518
P0C6F2
731
736
YQYNVL
5
WxxL
No
Gag-Pol polyprotein
Human immunodeficiency virus type 1 group M subtype B (isolate LW123)
5519
P0C6F2
856
861
QIYPGI
0
WxxL
No
Gag-Pol polyprotein
Human immunodeficiency virus type 1 group M subtype B (isolate LW123)
5520
P0C6F2
931
936
EPFKNL
4
WxxL
No
Gag-Pol polyprotein
Human immunodeficiency virus type 1 group M subtype B (isolate LW123)
5521
P0C6F2
1011
1016
KLWYQL
9
WxxL
No
Gag-Pol polyprotein
Human immunodeficiency virus type 1 group M subtype B (isolate LW123)
5522
P0C6F2
1068
1073
AIYLAL
7
WxxL
No
Gag-Pol polyprotein
Human immunodeficiency virus type 1 group M subtype B (isolate LW123)
5523
P0C6F2
1244
1249
TAYFLL
4
WxxL
No
Gag-Pol polyprotein
Human immunodeficiency virus type 1 group M subtype B (isolate LW123)
5524
P0C6F2
1277
1282
CWWAGI
4
WxxL
No
Gag-Pol polyprotein
Human immunodeficiency virus type 1 group M subtype B (isolate LW123)
5525
P15833
167
172
PGFQAL
10
xLIR
No
Gag-Pol polyprotein
Human immunodeficiency virus type 2 subtype B (isolate D205)
5526
P15833
1021
1026
PEWDFV
19
xLIR
No
Gag-Pol polyprotein
Human immunodeficiency virus type 2 subtype B (isolate D205)
5527
P15833
77
82
SLFNIV
4
WxxL
No
Gag-Pol polyprotein
Human immunodeficiency virus type 2 subtype B (isolate D205)
5528
P15833
137
142
GNYVHL
11
WxxL
No
Gag-Pol polyprotein
Human immunodeficiency virus type 2 subtype B (isolate D205)
5529
P15833
150
155
NAWVKL
14
WxxL
No
Gag-Pol polyprotein
Human immunodeficiency virus type 2 subtype B (isolate D205)
5530
P15833
260
265
RRWIQL
14
WxxL
No
Gag-Pol polyprotein
Human immunodeficiency virus type 2 subtype B (isolate D205)
5531
P15833
296
301
RFYKSL
5
WxxL
No
Gag-Pol polyprotein
Human immunodeficiency virus type 2 subtype B (isolate D205)
5532
P15833
373
378
IPFAAV
1
WxxL
No
Gag-Pol polyprotein
Human immunodeficiency virus type 2 subtype B (isolate D205)
5533
P15833
429
434
AGFLRV
8
WxxL
Yes
Gag-Pol polyprotein
Human immunodeficiency virus type 2 subtype B (isolate D205)
5534
P15833
569
574
KEYKDV
9
WxxL
No
Gag-Pol polyprotein
Human immunodeficiency virus type 2 subtype B (isolate D205)
5535
P15833
680
685
NKWRML
13
WxxL
No
Gag-Pol polyprotein
Human immunodeficiency virus type 2 subtype B (isolate D205)
5536
P15833
686
691
IDFREL
10
WxxL
No
Gag-Pol polyprotein
Human immunodeficiency virus type 2 subtype B (isolate D205)
5537
P15833
696
701
QDFTEV
13
WxxL
No
Gag-Pol polyprotein
Human immunodeficiency virus type 2 subtype B (isolate D205)
5538
P15833
723
728
DAYFSI
8
WxxL
No
Gag-Pol polyprotein
Human immunodeficiency virus type 2 subtype B (isolate D205)
5539
P15833
754
759
YIYKVL
4
WxxL
No
Gag-Pol polyprotein
Human immunodeficiency virus type 2 subtype B (isolate D205)
5540
P15833
879
884
QLFPGI
-1
WxxL
No
Gag-Pol polyprotein
Human immunodeficiency virus type 2 subtype B (isolate D205)
5541
P15833
903
908
VQWTEL
14
WxxL
No
Gag-Pol polyprotein
Human immunodeficiency virus type 2 subtype B (isolate D205)
5542
P15833
961
966
GKYAKV
5
WxxL
No
Gag-Pol polyprotein
Human immunodeficiency virus type 2 subtype B (isolate D205)
5543
P15833
990
995
VIWGEI
8
WxxL
No
Gag-Pol polyprotein
Human immunodeficiency virus type 2 subtype B (isolate D205)
5544
P15833
1012
1017
TDYWQV
8
WxxL
No
Gag-Pol polyprotein
Human immunodeficiency virus type 2 subtype B (isolate D205)
5545
P15833
1034
1039
LAYNLV
3
WxxL
No
Gag-Pol polyprotein
Human immunodeficiency virus type 2 subtype B (isolate D205)
5546
P15833
1299
1304
AWWVGI
11
WxxL
No
Gag-Pol polyprotein
Human immunodeficiency virus type 2 subtype B (isolate D205)
5547
P08361
117
122
RDWVLL
23
xLIR
No
Gag-Pol polyprotein (Fragment)
Cas-Br-E murine leukemia virus
5548
P08361
1
6
IDFTEV
12
WxxL
No
Gag-Pol polyprotein (Fragment)
Cas-Br-E murine leukemia virus
5549
P08361
11
16
YGYKYL
6
WxxL
No
Gag-Pol polyprotein (Fragment)
Cas-Br-E murine leukemia virus
5550
P08361
140
145
TPYEIL
9
WxxL
No
Gag-Pol polyprotein (Fragment)
Cas-Br-E murine leukemia virus
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Ioannis Nezis lab
|
University of Warwick