iLIR
@Viral
Home
Classification
ICTV
Caudovirales
Myoviridae
Podoviridae
Siphoviridae
Herpesvirales
Alloherpesviridae
Herpesviridae
Malacoherpesviridae
Ligamenvirales
Lipothrixviridae
Rudiviridae
Mononegavirales
Bornaviridae
Filoviridae
Mymonaviridae
Nyamiviridae
Paramyxoviridae
Pneumoviridae
Rhabdoviridae
Sunviridae
Unassigned
Nidovirales
Arteriviridae
Coronaviridae
Mesoniviridae
Roniviridae
Picornavirales
Dicistroviridae
Iflaviridae
Marnaviridae
Picornaviridae
Secoviridae
Unassigned
Tymovirales
Alphaflexiviridae
Betaflexiviridae
Gammaflexiviridae
Tymoviridae
Unassigned order
Baltimore system
dsDNA
Caudovirales
Myoviridae
Podoviridae
Siphoviridae
Herpesvirales
Alloherpesviridae
Herpesviridae
Malacoherpesviridae
Ligamenvirales
Lipothrixviridae
Rudiviridae
Unassigned order
dsRNA
Unassigned order
Amalgaviridae
Birnaviridae
Chrysoviridae
Cystoviridae
Endornaviridae
Hypoviridae
Megabirnaviridae
Partitiviridae
Picobirnaviridae
Quadriviridae
Reoviridae
Totiviridae
ssDNA
Unassigned order
Anelloviridae
Bidnaviridae
Circoviridae
Geminiviridae
Inoviridae
Nanoviridae
Microviridae
Mycodnaviridae
Parvoviridae
Pleolipoviridae
Spiraviridae
ssRNA (+)
Tymovirales
Alphaflexiviridae
Betaflexiviridae
Gammaflexiviridae
Tymoviridae
Picornavirales
Dicistroviridae
Picornaviridae
Secoviridae
Nidovirales
Arteriviridae
Coronaviridae
Mesoniviridae
Roniviridae
ssRNA (-)
Mononegavirales
Bornaviridae
Rhadbdoviridae
Filoviridae
Nyamaviridae
Paramyxoviridae
Unassigned order
Arenaviridae
Bunyaviridae
Ophioviridae
Orthomyxoviridae
ssRNA-RT
Retroviridae
dsDNA-RT
Caulimoviridae
Hepadnaviridae
Search
BLAST
ICTV
Baltimore system
Bibliography
Help
Links
iLIR Database
LIR Motif Search
LIR-containing proteins in
Retroviridae
>> EXPORT DATA
<< prev
1
2
...
127
128
129
130
131
...
154
155
next >>
S.No.
Uniprot ID
Start
End
LIR sequence
PSSM Score
▲
▼
Pattern
LIR in Anchor
Description
Species
6401
P12499
1000
1005
PEWEFV
19
xLIR
No
Gag-Pol polyprotein
Human immunodeficiency virus type 1 group M subtype D (isolate Z2/CDC-Z34)
6402
P12499
14
19
DAWEKI
18
WxxL
No
Gag-Pol polyprotein
Human immunodeficiency virus type 1 group M subtype D (isolate Z2/CDC-Z34)
6403
P12499
77
82
SLFNTV
4
WxxL
Yes
Gag-Pol polyprotein
Human immunodeficiency virus type 1 group M subtype D (isolate Z2/CDC-Z34)
6404
P12499
131
136
QNYPIV
5
WxxL
No
Gag-Pol polyprotein
Human immunodeficiency virus type 1 group M subtype D (isolate Z2/CDC-Z34)
6405
P12499
154
159
NAWVKV
13
WxxL
Yes
Gag-Pol polyprotein
Human immunodeficiency virus type 1 group M subtype D (isolate Z2/CDC-Z34)
6406
P12499
171
176
PMFSAL
8
WxxL
Yes
Gag-Pol polyprotein
Human immunodeficiency virus type 1 group M subtype D (isolate Z2/CDC-Z34)
6407
P12499
211
216
AEWDRL
18
WxxL
No
Gag-Pol polyprotein
Human immunodeficiency virus type 1 group M subtype D (isolate Z2/CDC-Z34)
6408
P12499
264
269
KRWIIL
15
WxxL
No
Gag-Pol polyprotein
Human immunodeficiency virus type 1 group M subtype D (isolate Z2/CDC-Z34)
6409
P12499
276
281
RMYSPV
9
WxxL
No
Gag-Pol polyprotein
Human immunodeficiency virus type 1 group M subtype D (isolate Z2/CDC-Z34)
6410
P12499
300
305
RFYKTL
6
WxxL
No
Gag-Pol polyprotein
Human immunodeficiency virus type 1 group M subtype D (isolate Z2/CDC-Z34)
6411
P12499
546
551
RQYDQI
10
WxxL
No
Gag-Pol polyprotein
Human immunodeficiency virus type 1 group M subtype D (isolate Z2/CDC-Z34)
6412
P12499
657
662
TKWRKL
11
WxxL
No
Gag-Pol polyprotein
Human immunodeficiency virus type 1 group M subtype D (isolate Z2/CDC-Z34)
6413
P12499
663
668
VDFREL
10
WxxL
No
Gag-Pol polyprotein
Human immunodeficiency virus type 1 group M subtype D (isolate Z2/CDC-Z34)
6414
P12499
673
678
QDFWEV
9
WxxL
No
Gag-Pol polyprotein
Human immunodeficiency virus type 1 group M subtype D (isolate Z2/CDC-Z34)
6415
P12499
701
706
DAYFSV
7
WxxL
No
Gag-Pol polyprotein
Human immunodeficiency virus type 1 group M subtype D (isolate Z2/CDC-Z34)
6416
P12499
732
737
YQYNVL
5
WxxL
No
Gag-Pol polyprotein
Human immunodeficiency virus type 1 group M subtype D (isolate Z2/CDC-Z34)
6417
P12499
857
862
QIYPGI
0
WxxL
No
Gag-Pol polyprotein
Human immunodeficiency virus type 1 group M subtype D (isolate Z2/CDC-Z34)
6418
P12499
932
937
EPFKNL
4
WxxL
No
Gag-Pol polyprotein
Human immunodeficiency virus type 1 group M subtype D (isolate Z2/CDC-Z34)
6419
P12499
1012
1017
KLWYQL
9
WxxL
No
Gag-Pol polyprotein
Human immunodeficiency virus type 1 group M subtype D (isolate Z2/CDC-Z34)
6420
P12499
1245
1250
TAYFIL
5
WxxL
No
Gag-Pol polyprotein
Human immunodeficiency virus type 1 group M subtype D (isolate Z2/CDC-Z34)
6421
P12499
1278
1283
CWWAGI
4
WxxL
No
Gag-Pol polyprotein
Human immunodeficiency virus type 1 group M subtype D (isolate Z2/CDC-Z34)
6422
P04025
633
638
ATYLPV
10
xLIR
No
Pol polyprotein
Simian retrovirus SRV-1
6423
P04025
3
8
GIWKFL
12
WxxL
No
Pol polyprotein
Simian retrovirus SRV-1
6424
P04025
79
84
GKWRLL
12
WxxL
No
Pol polyprotein
Simian retrovirus SRV-1
6425
P04025
112
117
QGYLKI
10
WxxL
No
Pol polyprotein
Simian retrovirus SRV-1
6426
P04025
123
128
DCFFSI
6
WxxL
No
Pol polyprotein
Simian retrovirus SRV-1
6427
P04025
154
159
FQWKVL
15
WxxL
No
Pol polyprotein
Simian retrovirus SRV-1
6428
P04025
209
214
QCFDQL
5
WxxL
No
Pol polyprotein
Simian retrovirus SRV-1
6429
P04025
234
239
DPYTYL
10
WxxL
No
Pol polyprotein
Simian retrovirus SRV-1
6430
P04025
264
269
NDFQKL
13
WxxL
No
Pol polyprotein
Simian retrovirus SRV-1
6431
P04025
277
282
RPYLKL
9
WxxL
No
Pol polyprotein
Simian retrovirus SRV-1
6432
P04025
289
294
PLFDTL
8
WxxL
No
Pol polyprotein
Simian retrovirus SRV-1
6433
P04025
356
361
IMWVHL
16
WxxL
No
Pol polyprotein
Simian retrovirus SRV-1
6434
P04025
371
376
PYYDAI
8
WxxL
No
Pol polyprotein
Simian retrovirus SRV-1
6435
P04025
388
393
KKYFGI
4
WxxL
No
Pol polyprotein
Simian retrovirus SRV-1
6436
P04025
422
427
ASYVGI
10
WxxL
No
Pol polyprotein
Simian retrovirus SRV-1
6437
P04025
438
443
IQFCKL
2
WxxL
No
Pol polyprotein
Simian retrovirus SRV-1
6438
P04025
446
451
FIFPQI
2
WxxL
No
Pol polyprotein
Simian retrovirus SRV-1
6439
P04025
662
667
SEFGNL
6
WxxL
No
Pol polyprotein
Simian retrovirus SRV-1
6440
P04025
700
705
HCFSII
3
WxxL
No
Pol polyprotein
Simian retrovirus SRV-1
6441
P04025
786
791
LNFLNL
6
WxxL
Yes
Pol polyprotein
Simian retrovirus SRV-1
6442
P04025
809
814
KQFAMV
6
WxxL
No
Pol polyprotein
Simian retrovirus SRV-1
6443
Q9QBZ5
534
539
GGFIKV
9
xLIR
No
Gag-Pol polyprotein
Human immunodeficiency virus type 1 group M subtype F2 (isolate MP255)
6444
Q9QBZ5
994
999
PEWEFV
19
xLIR
No
Gag-Pol polyprotein
Human immunodeficiency virus type 1 group M subtype F2 (isolate MP255)
6445
Q9QBZ5
14
19
DAWEKI
18
WxxL
No
Gag-Pol polyprotein
Human immunodeficiency virus type 1 group M subtype F2 (isolate MP255)
6446
Q9QBZ5
77
82
SLYNAV
4
WxxL
No
Gag-Pol polyprotein
Human immunodeficiency virus type 1 group M subtype F2 (isolate MP255)
6447
Q9QBZ5
126
131
QNYPIV
5
WxxL
No
Gag-Pol polyprotein
Human immunodeficiency virus type 1 group M subtype F2 (isolate MP255)
6448
Q9QBZ5
149
154
NAWVKV
13
WxxL
Yes
Gag-Pol polyprotein
Human immunodeficiency virus type 1 group M subtype F2 (isolate MP255)
6449
Q9QBZ5
166
171
PMFSAL
8
WxxL
Yes
Gag-Pol polyprotein
Human immunodeficiency virus type 1 group M subtype F2 (isolate MP255)
6450
Q9QBZ5
206
211
AEWDRL
18
WxxL
No
Gag-Pol polyprotein
Human immunodeficiency virus type 1 group M subtype F2 (isolate MP255)
Copyright ©
Ioannis Nezis lab
|
University of Warwick