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LIR Motif Search
LIR-containing proteins in
Retroviridae
>> EXPORT DATA
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S.No.
Uniprot ID
Start
End
LIR sequence
PSSM Score
▲
▼
Pattern
LIR in Anchor
Description
Species
6901
Q1A266
67
72
TTYWGL
4
WxxL
No
Virion infectivity factor
Simian immunodeficiency virus (isolate MB66)
6902
Q1A266
145
150
LQYLAL
8
WxxL
Yes
Virion infectivity factor
Simian immunodeficiency virus (isolate MB66)
6903
P27974
21
26
TKWQGI
12
WxxL
No
Virion infectivity factor
Simian immunodeficiency virus agm.vervet (isolate AGM155)
6904
P27974
69
74
DIYWHL
6
WxxL
No
Virion infectivity factor
Simian immunodeficiency virus agm.vervet (isolate AGM155)
6905
P27974
88
93
IQYVSL
8
WxxL
No
Virion infectivity factor
Simian immunodeficiency virus agm.vervet (isolate AGM155)
6906
P27974
151
156
LQYLAL
8
WxxL
Yes
Virion infectivity factor
Simian immunodeficiency virus agm.vervet (isolate AGM155)
6907
Q66013
6
11
VLFNRV
-1
WxxL
No
Probable Vpr-like protein
Feline immunodeficiency virus (isolate Petaluma)
6908
Q66013
64
69
FYYWQL
3
WxxL
No
Probable Vpr-like protein
Feline immunodeficiency virus (isolate Petaluma)
6909
P16904
26
31
ECWDHV
14
WxxL
No
Probable Vpr-like protein
Ovine maedi visna related virus (strain South Africa)
6910
P23429
26
31
ECWDYV
13
WxxL
No
Probable Vpr-like protein
Maedi visna virus (strain 1514 / clone LV1-1KS2)
6911
O70898
32
37
RHFPRV
2
WxxL
No
Protein Vpr
Human immunodeficiency virus type 1 group M subtype H (isolate 90CF056)
6912
O70898
52
57
DTWVGV
18
WxxL
No
Protein Vpr
Human immunodeficiency virus type 1 group M subtype H (isolate 90CF056)
6913
P05952
52
57
DTWAGV
14
WxxL
No
Protein Vpr
Human immunodeficiency virus type 1 group M subtype B (isolate ARV2/SF2)
6914
O70888
52
57
DTWEGV
18
WxxL
No
Protein Vpr
Human immunodeficiency virus type 1 group M subtype F1 (isolate 93BR020)
6915
P20883
32
37
RHFPRI
3
WxxL
No
Protein Vpr
Human immunodeficiency virus type 1 group M subtype B (isolate JRCSF)
6916
P20883
52
57
DTWAGV
14
WxxL
No
Protein Vpr
Human immunodeficiency virus type 1 group M subtype B (isolate JRCSF)
6917
Q79668
52
57
DTWEGV
18
WxxL
No
Protein Vpr
Human immunodeficiency virus type 1 group O (isolate MVP5180)
6918
Q9WC65
52
57
DTWEGV
18
WxxL
No
Protein Vpr
Human immunodeficiency virus type 1 group M subtype J (isolate SE9173)
6919
P12519
32
37
RHFPRI
3
WxxL
No
Protein Vpr
Human immunodeficiency virus type 1 group M subtype D (isolate Z2/CDC-Z34)
6920
P12519
52
57
DTWAGV
14
WxxL
No
Protein Vpr
Human immunodeficiency virus type 1 group M subtype D (isolate Z2/CDC-Z34)
6921
P18046
72
77
ALFVHL
7
WxxL
Yes
Protein Vpr
Human immunodeficiency virus type 2 subtype A (isolate Ghana-1)
6922
O89942
32
37
RHFPRL
3
WxxL
No
Protein Vpr
Human immunodeficiency virus type 1 group M subtype G (isolate SE6165)
6923
O89942
52
57
DTWEGV
18
WxxL
No
Protein Vpr
Human immunodeficiency virus type 1 group M subtype G (isolate SE6165)
6924
P05949
21
26
VVWTIV
11
WxxL
No
Protein Vpu
Human immunodeficiency virus type 1 group M subtype B (isolate ARV2/SF2)
6925
P05949
28
33
IEYRKI
7
WxxL
No
Protein Vpu
Human immunodeficiency virus type 1 group M subtype B (isolate ARV2/SF2)
6926
P05949
41
46
RLFDRI
7
WxxL
No
Protein Vpu
Human immunodeficiency virus type 1 group M subtype B (isolate ARV2/SF2)
6927
Q77376
15
20
LLFINV
2
WxxL
No
Protein Vpu
Human immunodeficiency virus type 1 group O (isolate ANT70)
6928
Q77376
21
26
ILWGFI
8
WxxL
No
Protein Vpu
Human immunodeficiency virus type 1 group O (isolate ANT70)
6929
P05924
20
25
VVWTIV
11
WxxL
No
Protein Vpu
Human immunodeficiency virus type 1 group M subtype A (isolate MAL)
6930
P17286
20
25
CIWGYI
5
WxxL
No
Protein Vpu
Simian immunodeficiency virus (isolate CPZ GAB1)
6931
P06939
20
25
EAFAWL
2
WxxL
No
Protein Vpx
Human immunodeficiency virus type 2 subtype A (isolate ROD)
6932
P06939
67
72
TKYRYL
4
WxxL
No
Protein Vpx
Human immunodeficiency virus type 2 subtype A (isolate ROD)
6933
P06939
78
83
AVYMHV
4
WxxL
No
Protein Vpx
Human immunodeficiency virus type 2 subtype A (isolate ROD)
6934
P18099
20
25
EAFEWL
6
WxxL
No
Protein Vpx
Human immunodeficiency virus type 2 subtype A (isolate BEN)
6935
P18099
67
72
TKYRYL
4
WxxL
No
Protein Vpx
Human immunodeficiency virus type 2 subtype A (isolate BEN)
6936
P16089
127
132
FMWDDI
19
xLIR
No
Virion infectivity factor
Feline immunodeficiency virus (isolate Petaluma)
6937
P16089
11
16
RLFAVL
5
WxxL
No
Virion infectivity factor
Feline immunodeficiency virus (isolate Petaluma)
6938
P16089
91
96
RMYIYI
11
WxxL
No
Virion infectivity factor
Feline immunodeficiency virus (isolate Petaluma)
6939
P16089
114
119
KEWPFV
14
WxxL
No
Virion infectivity factor
Feline immunodeficiency virus (isolate Petaluma)
6940
P16089
241
246
PSWNLL
14
WxxL
No
Virion infectivity factor
Feline immunodeficiency virus (isolate Petaluma)
6941
P31823
127
132
FMWDDI
19
xLIR
No
Virion infectivity factor
Feline immunodeficiency virus (isolate TM2)
6942
P31823
11
16
RLFAVL
5
WxxL
No
Virion infectivity factor
Feline immunodeficiency virus (isolate TM2)
6943
P31823
91
96
RLYVYI
8
WxxL
No
Virion infectivity factor
Feline immunodeficiency virus (isolate TM2)
6944
P31823
114
119
TEWPFV
13
WxxL
No
Virion infectivity factor
Feline immunodeficiency virus (isolate TM2)
6945
O70897
19
24
NTWKSL
14
WxxL
No
Virion infectivity factor
Human immunodeficiency virus type 1 group M subtype H (isolate 90CF056)
6946
O70897
67
72
TTYWGL
4
WxxL
No
Virion infectivity factor
Human immunodeficiency virus type 1 group M subtype H (isolate 90CF056)
6947
O70897
145
150
LQYLAL
8
WxxL
Yes
Virion infectivity factor
Human immunodeficiency virus type 1 group M subtype H (isolate 90CF056)
6948
O70887
19
24
NTWKSL
14
WxxL
No
Virion infectivity factor
Human immunodeficiency virus type 1 group M subtype F1 (isolate 93BR020)
6949
O70887
67
72
TTYWGL
4
WxxL
No
Virion infectivity factor
Human immunodeficiency virus type 1 group M subtype F1 (isolate 93BR020)
6950
O70887
145
150
LQYLAL
8
WxxL
Yes
Virion infectivity factor
Human immunodeficiency virus type 1 group M subtype F1 (isolate 93BR020)
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Ioannis Nezis lab
|
University of Warwick