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LIR Motif Search
LIR-containing proteins in
Retroviridae
>> EXPORT DATA
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S.No.
Uniprot ID
Start
End
LIR sequence
PSSM Score
▲
▼
Pattern
LIR in Anchor
Description
Species
651
P03397
226
231
EPFTVV
8
WxxL
No
Envelope glycoprotein gp95
Avian leukosis virus RSA
652
P03397
356
361
RAWQGI
13
WxxL
No
Envelope glycoprotein gp95
Avian leukosis virus RSA
653
P03397
422
427
RIFASI
4
WxxL
No
Envelope glycoprotein gp95
Avian leukosis virus RSA
654
P03397
480
485
IDFLLL
12
WxxL
No
Envelope glycoprotein gp95
Avian leukosis virus RSA
655
P03397
536
541
GLFGGI
0
WxxL
No
Envelope glycoprotein gp95
Avian leukosis virus RSA
656
P03397
589
594
TEYKKL
9
WxxL
No
Envelope glycoprotein gp95
Avian leukosis virus RSA
657
Q87041
114
119
AVYQPL
7
xLIR
No
Envelope glycoprotein gp130
Simian foamy virus (isolate chimpanzee)
658
Q87041
809
814
GSYLVL
12
xLIR
No
Envelope glycoprotein gp130
Simian foamy virus (isolate chimpanzee)
659
Q87041
69
74
LAWMLL
11
WxxL
No
Envelope glycoprotein gp130
Simian foamy virus (isolate chimpanzee)
660
Q87041
85
90
SCFLTI
8
WxxL
No
Envelope glycoprotein gp130
Simian foamy virus (isolate chimpanzee)
661
Q87041
135
140
PKYIEV
9
WxxL
No
Envelope glycoprotein gp130
Simian foamy virus (isolate chimpanzee)
662
Q87041
274
279
DYYIKV
9
WxxL
No
Envelope glycoprotein gp130
Simian foamy virus (isolate chimpanzee)
663
Q87041
310
315
NNYSHV
6
WxxL
No
Envelope glycoprotein gp130
Simian foamy virus (isolate chimpanzee)
664
Q87041
324
329
SKWYNI
11
WxxL
No
Envelope glycoprotein gp130
Simian foamy virus (isolate chimpanzee)
665
Q87041
370
375
ALFKEI
5
WxxL
No
Envelope glycoprotein gp130
Simian foamy virus (isolate chimpanzee)
666
Q87041
470
475
YDFGFL
9
WxxL
No
Envelope glycoprotein gp130
Simian foamy virus (isolate chimpanzee)
667
Q87041
540
545
RAFVGL
7
WxxL
No
Envelope glycoprotein gp130
Simian foamy virus (isolate chimpanzee)
668
Q87041
552
557
PSYPNV
4
WxxL
No
Envelope glycoprotein gp130
Simian foamy virus (isolate chimpanzee)
669
Q87041
575
580
NNYAKL
6
WxxL
No
Envelope glycoprotein gp130
Simian foamy virus (isolate chimpanzee)
670
Q87041
705
710
GLYYEL
5
WxxL
No
Envelope glycoprotein gp130
Simian foamy virus (isolate chimpanzee)
671
Q87041
719
724
NNWNVV
12
WxxL
No
Envelope glycoprotein gp130
Simian foamy virus (isolate chimpanzee)
672
Q87041
743
748
HPYEII
8
WxxL
No
Envelope glycoprotein gp130
Simian foamy virus (isolate chimpanzee)
673
Q87041
755
760
TKYLHL
8
WxxL
No
Envelope glycoprotein gp130
Simian foamy virus (isolate chimpanzee)
674
Q87041
798
803
EPFVQV
7
WxxL
No
Envelope glycoprotein gp130
Simian foamy virus (isolate chimpanzee)
675
Q87041
950
955
TAFSLL
4
WxxL
No
Envelope glycoprotein gp130
Simian foamy virus (isolate chimpanzee)
676
Q87041
973
978
LIFKIV
3
WxxL
No
Envelope glycoprotein gp130
Simian foamy virus (isolate chimpanzee)
677
P22380
85
90
PDYDEV
16
xLIR
No
Envelope glycoprotein gp160
Simian immunodeficiency virus (isolate GB1)
678
P22380
247
252
PGYVML
14
xLIR
No
Envelope glycoprotein gp160
Simian immunodeficiency virus (isolate GB1)
679
P22380
738
743
GVFLVL
7
xLIR
No
Envelope glycoprotein gp160
Simian immunodeficiency virus (isolate GB1)
680
P22380
5
10
NVYQEL
7
WxxL
No
Envelope glycoprotein gp160
Simian immunodeficiency virus (isolate GB1)
681
P22380
12
17
RRYLVV
9
WxxL
No
Envelope glycoprotein gp160
Simian immunodeficiency virus (isolate GB1)
682
P22380
35
40
TMFSLL
7
WxxL
No
Envelope glycoprotein gp160
Simian immunodeficiency virus (isolate GB1)
683
P22380
46
51
KQYVTV
10
WxxL
No
Envelope glycoprotein gp160
Simian immunodeficiency virus (isolate GB1)
684
P22380
97
102
ENFTGL
8
WxxL
No
Envelope glycoprotein gp160
Simian immunodeficiency virus (isolate GB1)
685
P22380
167
172
EIYLDV
7
WxxL
No
Envelope glycoprotein gp160
Simian immunodeficiency virus (isolate GB1)
686
P22380
346
351
LFYHGL
0
WxxL
No
Envelope glycoprotein gp160
Simian immunodeficiency virus (isolate GB1)
687
P22380
443
448
MFFCNV
-4
WxxL
No
Envelope glycoprotein gp160
Simian immunodeficiency virus (isolate GB1)
688
P22380
476
481
DDWMQV
20
WxxL
No
Envelope glycoprotein gp160
Simian immunodeficiency virus (isolate GB1)
689
P22380
539
544
AHYKLV
5
WxxL
No
Envelope glycoprotein gp160
Simian immunodeficiency virus (isolate GB1)
690
P22380
655
660
CSWAQV
9
WxxL
No
Envelope glycoprotein gp160
Simian immunodeficiency virus (isolate GB1)
691
P22380
753
758
ALWNTI
11
WxxL
No
Envelope glycoprotein gp160
Simian immunodeficiency virus (isolate GB1)
692
P22380
763
768
QGYRPV
6
WxxL
No
Envelope glycoprotein gp160
Simian immunodeficiency virus (isolate GB1)
693
P05885
23
28
IQYVTV
8
WxxL
No
Envelope glycoprotein gp160
Simian immunodeficiency virus (isolate Mm142-83)
694
P05885
62
67
DDYSEL
17
WxxL
No
Envelope glycoprotein gp160
Simian immunodeficiency virus (isolate Mm142-83)
695
P05885
226
231
DYWDAI
17
WxxL
No
Envelope glycoprotein gp160
Simian immunodeficiency virus (isolate Mm142-83)
696
P05885
239
244
PGYALL
8
WxxL
No
Envelope glycoprotein gp160
Simian immunodeficiency virus (isolate Mm142-83)
697
P05885
442
447
NTWHKV
12
WxxL
No
Envelope glycoprotein gp160
Simian immunodeficiency virus (isolate Mm142-83)
698
P05885
498
503
GDYKLV
12
WxxL
No
Envelope glycoprotein gp160
Simian immunodeficiency virus (isolate Mm142-83)
699
P05885
614
619
CAFRQV
-1
WxxL
No
Envelope glycoprotein gp160
Simian immunodeficiency virus (isolate Mm142-83)
700
P05885
682
687
GNWFDL
13
WxxL
No
Envelope glycoprotein gp160
Simian immunodeficiency virus (isolate Mm142-83)
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Ioannis Nezis lab
|
University of Warwick