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LIR Motif Search
LIR-containing proteins in
Retroviridae
>> EXPORT DATA
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S.No.
Uniprot ID
Start
End
LIR sequence
PSSM Score
▲
▼
Pattern
LIR in Anchor
Description
Species
7001
P04595
20
25
EKWHSL
13
WxxL
No
Virion infectivity factor
Human immunodeficiency virus type 2 subtype A (isolate ROD)
7002
P04595
70
75
QAYWNL
1
WxxL
No
Virion infectivity factor
Human immunodeficiency virus type 2 subtype A (isolate ROD)
7003
P04595
95
100
KFWTDV
11
WxxL
No
Virion infectivity factor
Human immunodeficiency virus type 2 subtype A (isolate ROD)
7004
P04595
148
153
LQFLAL
7
WxxL
Yes
Virion infectivity factor
Human immunodeficiency virus type 2 subtype A (isolate ROD)
7005
P04595
202
207
TYFPGV
-2
WxxL
No
Virion infectivity factor
Human immunodeficiency virus type 2 subtype A (isolate ROD)
7006
P07570
73
78
GIYGPL
3
WxxL
No
Protease
Mason-Pfizer monkey virus
7007
P07570
81
86
NTFGLI
5
WxxL
No
Protease
Mason-Pfizer monkey virus
7008
P07570
98
103
QVYPGV
-1
WxxL
No
Protease
Mason-Pfizer monkey virus
7009
P07570
181
186
KMFTGL
8
WxxL
No
Protease
Mason-Pfizer monkey virus
7010
P21407
78
83
GIYGPL
3
WxxL
No
Protease
Squirrel monkey retrovirus
7011
P21407
86
91
QTFGLI
5
WxxL
No
Protease
Squirrel monkey retrovirus
7012
P21407
186
191
KLFSGI
2
WxxL
No
Protease
Squirrel monkey retrovirus
7013
P0C1P3
52
57
DTWEGV
18
WxxL
No
Protein Vpr
Human immunodeficiency virus type 1 group M subtype K (isolate 97ZR-EQTB11)
7014
Q73369
32
37
RHFPRI
3
WxxL
No
Protein Vpr
Human immunodeficiency virus type 1 group M subtype B (strain 89.6)
7015
Q73369
52
57
DTWTGV
17
WxxL
No
Protein Vpr
Human immunodeficiency virus type 1 group M subtype B (strain 89.6)
7016
P69727
32
37
RHFPRI
3
WxxL
No
Protein Vpr
Human immunodeficiency virus type 1 group M subtype B (isolate HXB3)
7017
P69727
52
57
DTWAGV
14
WxxL
No
Protein Vpr
Human immunodeficiency virus type 1 group M subtype B (isolate HXB3)
7018
P05950
32
37
RHFPRI
3
WxxL
No
Protein Vpr
Human immunodeficiency virus type 1 group M subtype B (isolate MN)
7019
P05950
52
57
DTWAGV
14
WxxL
No
Protein Vpr
Human immunodeficiency virus type 1 group M subtype B (isolate MN)
7020
P20891
32
37
RHFPRI
3
WxxL
No
Protein Vpr
Human immunodeficiency virus type 1 group M subtype B (isolate OYI)
7021
P20891
52
57
DTWEGV
18
WxxL
No
Protein Vpr
Human immunodeficiency virus type 1 group M subtype B (isolate OYI)
7022
P11265
114
119
ASFVFL
12
xLIR
No
Protein Vpr
Simian immunodeficiency virus (isolate K78)
7023
P11265
92
97
LNYTAL
9
WxxL
No
Protein Vpr
Simian immunodeficiency virus (isolate K78)
7024
O70901
20
25
IVWTIV
11
WxxL
No
Protein Vpu
Human immunodeficiency virus type 1 group M subtype H (isolate 90CF056)
7025
O70901
27
32
IEYKKL
8
WxxL
No
Protein Vpu
Human immunodeficiency virus type 1 group M subtype H (isolate 90CF056)
7026
O70891
28
33
IEYKKL
8
WxxL
No
Protein Vpu
Human immunodeficiency virus type 1 group M subtype F1 (isolate 93BR020)
7027
O70891
41
46
RLYKRI
5
WxxL
No
Protein Vpu
Human immunodeficiency virus type 1 group M subtype F1 (isolate 93BR020)
7028
P19510
54
59
IRYLGL
4
WxxL
No
Putative uncharacterized protein W
Ovine maedi visna related virus (strain South Africa)
7029
P05947
21
26
VVWSIV
9
WxxL
No
Protein Vpu
Human immunodeficiency virus type 1 group M subtype B (isolate MN)
7030
P05947
28
33
IEYRKI
7
WxxL
No
Protein Vpu
Human immunodeficiency virus type 1 group M subtype B (isolate MN)
7031
P15836
19
24
EAFAWL
2
WxxL
No
Protein Vpx
Human immunodeficiency virus type 2 subtype B (isolate D205)
7032
P15836
66
71
TKYRYL
4
WxxL
No
Protein Vpx
Human immunodeficiency virus type 2 subtype B (isolate D205)
7033
P12454
20
25
EAFDWL
6
WxxL
No
Protein Vpx
Human immunodeficiency virus type 2 subtype A (isolate SBLISY)
7034
P12454
67
72
TKYRYL
4
WxxL
No
Protein Vpx
Human immunodeficiency virus type 2 subtype A (isolate SBLISY)
7035
Q76636
19
24
EAFDWL
6
WxxL
No
Protein Vpx
Human immunodeficiency virus type 2 subtype B (isolate UC1)
7036
Q76636
66
71
TKYRYL
4
WxxL
No
Protein Vpx
Human immunodeficiency virus type 2 subtype B (isolate UC1)
7037
P04597
19
24
KTWKSL
15
WxxL
No
Virion infectivity factor
Human immunodeficiency virus type 1 group M subtype D (isolate ELI)
7038
P04597
67
72
KTYWGL
5
WxxL
No
Virion infectivity factor
Human immunodeficiency virus type 1 group M subtype D (isolate ELI)
7039
P04597
145
150
LQYLAL
8
WxxL
Yes
Virion infectivity factor
Human immunodeficiency virus type 1 group M subtype D (isolate ELI)
7040
P20877
19
24
RTWNSL
15
WxxL
No
Virion infectivity factor
Human immunodeficiency virus type 1 group M subtype B (isolate JRCSF)
7041
P20877
67
72
TTYWGL
4
WxxL
No
Virion infectivity factor
Human immunodeficiency virus type 1 group M subtype B (isolate JRCSF)
7042
P20877
145
150
LQYLAL
8
WxxL
Yes
Virion infectivity factor
Human immunodeficiency virus type 1 group M subtype B (isolate JRCSF)
7043
P0C1L9
19
24
RTWNSL
15
WxxL
No
Virion infectivity factor
Human immunodeficiency virus type 1 group M subtype F2 (isolate MP257)
7044
P0C1L9
68
73
ITYWGL
3
WxxL
No
Virion infectivity factor
Human immunodeficiency virus type 1 group M subtype F2 (isolate MP257)
7045
P0C1L9
146
151
LQYLAL
8
WxxL
Yes
Virion infectivity factor
Human immunodeficiency virus type 1 group M subtype F2 (isolate MP257)
7046
P12504
19
24
NTWKRL
13
WxxL
No
Virion infectivity factor
Human immunodeficiency virus type 1 group M subtype B (isolate NY5)
7047
P12504
67
72
TTYWGL
4
WxxL
No
Virion infectivity factor
Human immunodeficiency virus type 1 group M subtype B (isolate NY5)
7048
P12504
145
150
LQYLAL
8
WxxL
Yes
Virion infectivity factor
Human immunodeficiency virus type 1 group M subtype B (isolate NY5)
7049
Q9IDV7
19
24
RTWNSL
15
WxxL
No
Virion infectivity factor
Human immunodeficiency virus type 1 group N (isolate YBF106)
7050
Q9IDV7
67
72
VTYWGL
3
WxxL
No
Virion infectivity factor
Human immunodeficiency virus type 1 group N (isolate YBF106)
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Ioannis Nezis lab
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University of Warwick