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LIR Motif Search
LIR-containing proteins in
Retroviridae
>> EXPORT DATA
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S.No.
Uniprot ID
Start
End
LIR sequence
PSSM Score
▲
▼
Pattern
LIR in Anchor
Description
Species
7351
Q89721
19
24
EAFEWL
6
WxxL
No
Protein Vpx
Human immunodeficiency virus type 2 subtype B (isolate EHO)
7352
Q89721
66
71
TKYRYL
4
WxxL
No
Protein Vpx
Human immunodeficiency virus type 2 subtype B (isolate EHO)
7353
P20881
20
25
EAFEWL
6
WxxL
No
Protein Vpx
Human immunodeficiency virus type 2 subtype A (isolate ST)
7354
P20881
67
72
TKYRYL
4
WxxL
No
Protein Vpx
Human immunodeficiency virus type 2 subtype A (isolate ST)
7355
P11266
20
25
EAFEWL
6
WxxL
No
Protein Vpx
Simian immunodeficiency virus (isolate K78)
7356
P11266
67
72
VKYRYL
3
WxxL
No
Protein Vpx
Simian immunodeficiency virus (isolate K78)
7357
P19032
118
123
DEYTEI
16
xLIR
No
Probable protein Rev
Feline immunodeficiency virus (strain San Diego)
7358
P19032
53
58
QEYCKI
7
WxxL
Yes
Probable protein Rev
Feline immunodeficiency virus (strain San Diego)
7359
P19032
106
111
DRFRKL
7
WxxL
Yes
Probable protein Rev
Feline immunodeficiency virus (strain San Diego)
7360
P16903
22
27
ETWQQV
16
WxxL
Yes
Protein Rev
Ovine maedi visna related virus (strain South Africa)
7361
P16903
79
84
GWFQWL
2
WxxL
Yes
Protein Rev
Ovine maedi visna related virus (strain South Africa)
7362
P69733
46
51
RRWQQL
14
WxxL
Yes
Protein Rev
Simian immunodeficiency virus (isolate K6W)
7363
P12486
44
49
QRWQQI
12
WxxL
Yes
Protein Rev
Simian immunodeficiency virus (isolate F236/smH4)
7364
P27981
21
26
NPYPPV
2
WxxL
No
Protein Rev
Simian immunodeficiency virus agm.vervet (isolate AGM3)
7365
P0C205
63
68
PYWPPV
8
WxxL
Yes
Protein Rex
Human T-cell leukemia virus 1 (strain Japan ATK-1 subtype A)
7366
P0C205
85
90
QLYSSL
4
WxxL
Yes
Protein Rex
Human T-cell leukemia virus 1 (strain Japan ATK-1 subtype A)
7367
Q85601
42
47
IVYRPI
2
WxxL
Yes
Protein Rex
Human T-cell leukemia virus 2
7368
Q85601
64
69
PSWPPV
12
WxxL
No
Protein Rex
Human T-cell leukemia virus 2
7369
P32543
39
44
DQWCRV
12
WxxL
Yes
Protein Rev
Equine infectious anemia virus (isolate CL22)
7370
P32543
115
120
GIWREL
11
WxxL
No
Protein Rev
Equine infectious anemia virus (isolate CL22)
7371
P18093
45
50
RQWLRL
15
WxxL
Yes
Protein Rev
Human immunodeficiency virus type 2 subtype A (isolate BEN)
7372
P04615
45
50
QRWRQI
9
WxxL
Yes
Protein Rev
Human immunodeficiency virus type 2 subtype A (isolate ROD)
7373
P0C208
29
34
VFFTDI
3
WxxL
Yes
Protein Rex
Human T-cell leukemia virus 1 (isolate Melanesia mel5 subtype C)
7374
P0C208
63
68
PYWPPV
8
WxxL
No
Protein Rex
Human T-cell leukemia virus 1 (isolate Melanesia mel5 subtype C)
7375
P0C208
85
90
QLYSSL
4
WxxL
Yes
Protein Rex
Human T-cell leukemia virus 1 (isolate Melanesia mel5 subtype C)
7376
P24104
45
50
QRWRQI
9
WxxL
Yes
Protein Rev
Human immunodeficiency virus type 2 subtype A (isolate CAM2)
7377
Q74232
100
105
PIWDQL
13
WxxL
Yes
Protein Rev
Human immunodeficiency virus type 2 subtype B (isolate EHO)
7378
Q82855
89
94
SFWGTL
10
WxxL
Yes
Protein Rev
Jembrana disease virus
7379
Q82855
121
126
ERFEDL
9
WxxL
Yes
Protein Rev
Jembrana disease virus
7380
P08809
22
27
RRWQQL
14
WxxL
No
Protein Rev (Fragment)
Simian immunodeficiency virus (isolate Mm251)
7381
Q0R5R0
53
58
GGFVPL
11
xLIR
Yes
Protein Rex
Human T-cell leukemia virus 3 (strain 2026ND)
7382
Q0R5R0
42
47
TVYRPI
3
WxxL
Yes
Protein Rex
Human T-cell leukemia virus 3 (strain 2026ND)
7383
Q0R5R0
86
91
QLYNTL
4
WxxL
Yes
Protein Rex
Human T-cell leukemia virus 3 (strain 2026ND)
7384
Q0R5R0
172
177
CAFTSI
4
WxxL
Yes
Protein Rex
Human T-cell leukemia virus 3 (strain 2026ND)
7385
P01126
15
20
EPYIEI
10
WxxL
No
Transforming protein rel polyprotein
Avian reticuloendotheliosis virus
7386
P01126
53
58
KTFPSI
6
WxxL
No
Transforming protein rel polyprotein
Avian reticuloendotheliosis virus
7387
P01126
62
67
NYFGKV
0
WxxL
Yes
Transforming protein rel polyprotein
Avian reticuloendotheliosis virus
7388
P01126
108
113
LSFQNL
7
WxxL
No
Transforming protein rel polyprotein
Avian reticuloendotheliosis virus
7389
P01126
283
288
VDFRYL
8
WxxL
No
Transforming protein rel polyprotein
Avian reticuloendotheliosis virus
7390
P01126
385
390
SCWQQL
13
WxxL
Yes
Transforming protein rel polyprotein
Avian reticuloendotheliosis virus
7391
P01126
425
430
PAYNPL
5
WxxL
No
Transforming protein rel polyprotein
Avian reticuloendotheliosis virus
7392
P0C1L2
16
21
VRYIKI
6
WxxL
Yes
Protein Rev
Human immunodeficiency virus type 1 group M subtype F2 (isolate MP255)
7393
P12448
45
50
RRWKQI
12
WxxL
Yes
Protein Rev
Human immunodeficiency virus type 2 subtype A (isolate SBLISY)
7394
P12448
102
107
AVWVRV
12
WxxL
Yes
Protein Rev
Human immunodeficiency virus type 2 subtype A (isolate SBLISY)
7395
P21280
22
27
ETWNQV
13
WxxL
Yes
Protein Rev
Maedi visna virus (strain 1514)
7396
P21280
79
84
GWYKWL
1
WxxL
Yes
Protein Rev
Maedi visna virus (strain 1514)
7397
P0C206
63
68
PYWPPV
8
WxxL
Yes
Protein Rex
Human T-cell leukemia virus 1 (isolate Caribbea HS-35 subtype A)
7398
P0C206
85
90
QLYSSL
4
WxxL
Yes
Protein Rex
Human T-cell leukemia virus 1 (isolate Caribbea HS-35 subtype A)
7399
P23175
88
93
KSFEDI
11
xLIR
No
GTPase HRas
Murine sarcoma virus NS.C58
7400
P23175
2
7
TEYKLV
8
WxxL
No
GTPase HRas
Murine sarcoma virus NS.C58
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Ioannis Nezis lab
|
University of Warwick