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LIR Motif Search
LIR-containing proteins in
Retroviridae
>> EXPORT DATA
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S.No.
Uniprot ID
Start
End
LIR sequence
PSSM Score
▲
▼
Pattern
LIR in Anchor
Description
Species
7401
P23175
76
81
EGFLCV
8
WxxL
Yes
GTPase HRas
Murine sarcoma virus NS.C58
7402
P23175
154
159
DAFYTL
8
WxxL
No
GTPase HRas
Murine sarcoma virus NS.C58
7403
P01117
88
93
KSFEDI
11
xLIR
No
GTPase KRas
Kirsten murine sarcoma virus
7404
P01117
2
7
TEYKLV
8
WxxL
No
GTPase KRas
Kirsten murine sarcoma virus
7405
P01117
76
81
EGFLCV
8
WxxL
Yes
GTPase KRas
Kirsten murine sarcoma virus
7406
P01117
154
159
DAFYTL
8
WxxL
No
GTPase KRas
Kirsten murine sarcoma virus
7407
P24097
82
87
GFWKSL
10
WxxL
Yes
Protein Rev
Bovine immunodeficiency virus (strain R29)
7408
P24097
150
155
RSYFKL
9
WxxL
Yes
Protein Rev
Bovine immunodeficiency virus (strain R29)
7409
O70890
16
21
VRYIKI
6
WxxL
Yes
Protein Rev
Human immunodeficiency virus type 1 group M subtype F1 (isolate 93BR020)
7410
P0C1L1
16
21
VRYIKI
6
WxxL
Yes
Protein Rev
Human immunodeficiency virus type 1 group M subtype F2 (isolate MP257)
7411
P0C1L1
26
31
NPYPKL
3
WxxL
No
Protein Rev
Human immunodeficiency virus type 1 group M subtype F2 (isolate MP257)
7412
P17754
45
50
RQWFRL
12
WxxL
Yes
Protein Rev
Human immunodeficiency virus type 2 subtype A (isolate D194)
7413
P18039
45
50
RRWLRL
14
WxxL
Yes
Protein Rev
Human immunodeficiency virus type 2 subtype A (isolate Ghana-1)
7414
P0C207
63
68
PYWPPV
8
WxxL
Yes
Protein Rex
Human T-cell leukemia virus 1 (isolate Zaire EL subtype B)
7415
P0C207
85
90
QLYSSL
4
WxxL
Yes
Protein Rex
Human T-cell leukemia virus 1 (isolate Zaire EL subtype B)
7416
P33460
5
10
ARYMRL
5
WxxL
Yes
Protein Rev
Caprine arthritis encephalitis virus (strain Cork)
7417
P33460
14
19
ENWVEV
18
WxxL
No
Protein Rev
Caprine arthritis encephalitis virus (strain Cork)
7418
P33460
42
47
SKYPDI
6
WxxL
No
Protein Rev
Caprine arthritis encephalitis virus (strain Cork)
7419
P33460
66
71
GFWRWL
6
WxxL
Yes
Protein Rev
Caprine arthritis encephalitis virus (strain Cork)
7420
P11305
25
30
NDWWKI
16
WxxL
No
Protein Rev
Equine infectious anemia virus (isolate 1369)
7421
P11305
39
44
DQWCRV
12
WxxL
No
Protein Rev
Equine infectious anemia virus (isolate 1369)
7422
P11305
115
120
GIWREL
11
WxxL
No
Protein Rev
Equine infectious anemia virus (isolate 1369)
7423
P20885
9
14
RQWIGL
14
WxxL
No
Probable protein Rev
Feline immunodeficiency virus (isolate Petaluma)
7424
P20885
53
58
QNYCNI
3
WxxL
Yes
Probable protein Rev
Feline immunodeficiency virus (isolate Petaluma)
7425
P20885
104
109
DRFRKL
7
WxxL
Yes
Probable protein Rev
Feline immunodeficiency virus (isolate Petaluma)
7426
P0C1L6
26
31
NPYPNL
1
WxxL
No
Protein Rev
Human immunodeficiency virus type 1 group M subtype K (isolate 96CM-MP535)
7427
P15830
103
108
PVWDQL
13
WxxL
Yes
Protein Rev
Human immunodeficiency virus type 2 subtype B (isolate D205)
7428
P05873
45
50
QRWRQI
9
WxxL
Yes
Protein Rev
Human immunodeficiency virus type 2 subtype A (isolate NIH-Z)
7429
P20870
45
50
QRWRQL
9
WxxL
Yes
Protein Rev
Human immunodeficiency virus type 2 subtype A (isolate ST)
7430
P17280
113
118
GNYSIL
9
WxxL
Yes
Protein Rev
Simian immunodeficiency virus (isolate CPZ GAB1)
7431
P69734
46
51
RRWQQL
14
WxxL
Yes
Protein Rev
Simian immunodeficiency virus (isolate K78)
7432
P19502
43
48
QRWQQI
12
WxxL
Yes
Protein Rev
Simian immunodeficiency virus (isolate PBj14/BCL-3)
7433
P05876
8
13
RRFVRL
8
WxxL
Yes
Protein Rev
Simian immunodeficiency virus agm.vervet (isolate AGM TYO-1)
7434
P31628
14
19
KNWMEV
14
WxxL
No
Protein Rev
Caprine arthritis encephalitis virus
7435
P31628
42
47
LKYPNL
2
WxxL
Yes
Protein Rev
Caprine arthritis encephalitis virus
7436
P31628
66
71
GFWRWL
6
WxxL
Yes
Protein Rev
Caprine arthritis encephalitis virus
7437
P20919
39
44
DQWCRV
12
WxxL
Yes
Protein Rev
Equine infectious anemia virus (strain Wyoming)
7438
P20919
115
120
GIWREL
11
WxxL
No
Protein Rev
Equine infectious anemia virus (strain Wyoming)
7439
Q76631
93
98
QAFTCI
4
WxxL
Yes
Protein Rev
Human immunodeficiency virus type 2 subtype B (isolate UC1)
7440
Q76631
100
105
PVWDQL
13
WxxL
Yes
Protein Rev
Human immunodeficiency virus type 2 subtype B (isolate UC1)
7441
Q02839
126
131
GCYCPI
3
WxxL
Yes
Protein Rev
Simian immunodeficiency virus agm.grivet (isolate AGM gr-1)
7442
P35957
22
27
ETWNQV
13
WxxL
Yes
Protein Rev
Maedi visna virus (strain KV1772)
7443
P35957
79
84
GWYKWL
1
WxxL
Yes
Protein Rev
Maedi visna virus (strain KV1772)
7444
Q09SZ8
53
58
GGFVPL
11
xLIR
Yes
Protein Rex
Human T-cell leukemia virus 3 (strain Pyl43)
7445
Q09SZ8
42
47
TVYRPI
3
WxxL
Yes
Protein Rex
Human T-cell leukemia virus 3 (strain Pyl43)
7446
Q09SZ8
86
91
QLYNTL
4
WxxL
Yes
Protein Rex
Human T-cell leukemia virus 3 (strain Pyl43)
7447
Q74125
45
50
QHWRQL
9
WxxL
Yes
Protein Rev
Human immunodeficiency virus type 2 subtype A (isolate KR)
7448
Q74125
106
111
ETYNSL
9
WxxL
Yes
Protein Rev
Human immunodeficiency virus type 2 subtype A (isolate KR)
7449
Q74125
113
118
AIWVRV
12
WxxL
Yes
Protein Rev
Human immunodeficiency virus type 2 subtype A (isolate KR)
7450
P36339
12
17
RRYLVV
9
WxxL
Yes
Protein Rev
Simian immunodeficiency virus (isolate African mandrill)
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Ioannis Nezis lab
|
University of Warwick