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LIR Motif Search
LIR-containing proteins in
Retroviridae
>> EXPORT DATA
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S.No.
Uniprot ID
Start
End
LIR sequence
PSSM Score
▲
▼
Pattern
LIR in Anchor
Description
Species
901
O89292
474
479
YKYKVV
5
WxxL
No
Envelope glycoprotein gp160
Human immunodeficiency virus type 1 group M subtype F1 (isolate 93BR020)
902
O89292
631
636
EIYRLI
5
WxxL
No
Envelope glycoprotein gp160
Human immunodeficiency virus type 1 group M subtype F1 (isolate 93BR020)
903
O89292
654
659
DKWASL
15
WxxL
No
Envelope glycoprotein gp160
Human immunodeficiency virus type 1 group M subtype F1 (isolate 93BR020)
904
O89292
660
665
WNWFDI
10
WxxL
No
Envelope glycoprotein gp160
Human immunodeficiency virus type 1 group M subtype F1 (isolate 93BR020)
905
O89292
669
674
LWYIKI
5
WxxL
No
Envelope glycoprotein gp160
Human immunodeficiency virus type 1 group M subtype F1 (isolate 93BR020)
906
O89292
687
692
IVFTVL
5
WxxL
No
Envelope glycoprotein gp160
Human immunodeficiency virus type 1 group M subtype F1 (isolate 93BR020)
907
O89292
700
705
KGYSPL
9
WxxL
No
Envelope glycoprotein gp160
Human immunodeficiency virus type 1 group M subtype F1 (isolate 93BR020)
908
O89292
740
745
TGFLAL
9
WxxL
No
Envelope glycoprotein gp160
Human immunodeficiency virus type 1 group M subtype F1 (isolate 93BR020)
909
O89292
756
761
FSYRHL
9
WxxL
No
Envelope glycoprotein gp160
Human immunodeficiency virus type 1 group M subtype F1 (isolate 93BR020)
910
Q9QBZ8
710
715
LSFQTL
10
xLIR
No
Envelope glycoprotein gp160
Human immunodeficiency virus type 1 group M subtype K (isolate 97ZR-EQTB11)
911
Q9QBZ8
745
750
SGFLAL
11
xLIR
No
Envelope glycoprotein gp160
Human immunodeficiency virus type 1 group M subtype K (isolate 97ZR-EQTB11)
912
Q9QBZ8
783
788
GSWEAL
18
xLIR
No
Envelope glycoprotein gp160
Human immunodeficiency virus type 1 group M subtype K (isolate 97ZR-EQTB11)
913
Q9QBZ8
8
13
RNWQHL
17
WxxL
No
Envelope glycoprotein gp160
Human immunodeficiency virus type 1 group M subtype K (isolate 97ZR-EQTB11)
914
Q9QBZ8
18
23
ILFLGI
2
WxxL
No
Envelope glycoprotein gp160
Human immunodeficiency virus type 1 group M subtype K (isolate 97ZR-EQTB11)
915
Q9QBZ8
32
37
NLWVTV
13
WxxL
No
Envelope glycoprotein gp160
Human immunodeficiency virus type 1 group M subtype K (isolate 97ZR-EQTB11)
916
Q9QBZ8
177
182
ALFYKL
3
WxxL
Yes
Envelope glycoprotein gp160
Human immunodeficiency virus type 1 group M subtype K (isolate 97ZR-EQTB11)
917
Q9QBZ8
216
221
VSFEPI
9
WxxL
No
Envelope glycoprotein gp160
Human immunodeficiency virus type 1 group M subtype K (isolate 97ZR-EQTB11)
918
Q9QBZ8
229
234
AGFAIL
8
WxxL
No
Envelope glycoprotein gp160
Human immunodeficiency virus type 1 group M subtype K (isolate 97ZR-EQTB11)
919
Q9QBZ8
418
423
NMWQKV
15
WxxL
Yes
Envelope glycoprotein gp160
Human immunodeficiency virus type 1 group M subtype K (isolate 97ZR-EQTB11)
920
Q9QBZ8
479
484
YKYKVV
5
WxxL
Yes
Envelope glycoprotein gp160
Human immunodeficiency virus type 1 group M subtype K (isolate 97ZR-EQTB11)
921
Q9QBZ8
636
641
TIYRLI
3
WxxL
No
Envelope glycoprotein gp160
Human immunodeficiency virus type 1 group M subtype K (isolate 97ZR-EQTB11)
922
Q9QBZ8
659
664
DKWASL
15
WxxL
No
Envelope glycoprotein gp160
Human immunodeficiency virus type 1 group M subtype K (isolate 97ZR-EQTB11)
923
Q9QBZ8
665
670
WNWFDI
10
WxxL
No
Envelope glycoprotein gp160
Human immunodeficiency virus type 1 group M subtype K (isolate 97ZR-EQTB11)
924
Q9QBZ8
674
679
LWYIKI
5
WxxL
No
Envelope glycoprotein gp160
Human immunodeficiency virus type 1 group M subtype K (isolate 97ZR-EQTB11)
925
Q9QBZ8
692
697
IVFTVL
5
WxxL
No
Envelope glycoprotein gp160
Human immunodeficiency virus type 1 group M subtype K (isolate 97ZR-EQTB11)
926
Q9QBZ8
705
710
QGYSPL
8
WxxL
No
Envelope glycoprotein gp160
Human immunodeficiency virus type 1 group M subtype K (isolate 97ZR-EQTB11)
927
Q9QBZ8
761
766
FSYRHL
9
WxxL
No
Envelope glycoprotein gp160
Human immunodeficiency virus type 1 group M subtype K (isolate 97ZR-EQTB11)
928
Q9QBZ8
790
795
YLWNLI
8
WxxL
No
Envelope glycoprotein gp160
Human immunodeficiency virus type 1 group M subtype K (isolate 97ZR-EQTB11)
929
Q9QBZ8
830
835
RAFRAL
5
WxxL
No
Envelope glycoprotein gp160
Human immunodeficiency virus type 1 group M subtype K (isolate 97ZR-EQTB11)
930
Q9QBZ8
844
849
QGFERL
9
WxxL
No
Envelope glycoprotein gp160
Human immunodeficiency virus type 1 group M subtype K (isolate 97ZR-EQTB11)
931
Q75008
703
708
LSFQTL
10
xLIR
No
Envelope glycoprotein gp160
Human immunodeficiency virus type 1 group M subtype C (isolate ETH2220)
932
Q75008
783
788
RGWETL
20
xLIR
No
Envelope glycoprotein gp160
Human immunodeficiency virus type 1 group M subtype C (isolate ETH2220)
933
Q75008
14
19
WIWGIL
7
WxxL
No
Envelope glycoprotein gp160
Human immunodeficiency virus type 1 group M subtype C (isolate ETH2220)
934
Q75008
32
37
NLWVTV
13
WxxL
No
Envelope glycoprotein gp160
Human immunodeficiency virus type 1 group M subtype C (isolate ETH2220)
935
Q75008
69
74
GTFACV
4
WxxL
No
Envelope glycoprotein gp160
Human immunodeficiency virus type 1 group M subtype C (isolate ETH2220)
936
Q75008
171
176
ALFYKL
3
WxxL
Yes
Envelope glycoprotein gp160
Human immunodeficiency virus type 1 group M subtype C (isolate ETH2220)
937
Q75008
186
191
TDYRLI
11
WxxL
No
Envelope glycoprotein gp160
Human immunodeficiency virus type 1 group M subtype C (isolate ETH2220)
938
Q75008
218
223
AGYAIL
9
WxxL
No
Envelope glycoprotein gp160
Human immunodeficiency virus type 1 group M subtype C (isolate ETH2220)
939
Q75008
269
274
IRFENL
4
WxxL
No
Envelope glycoprotein gp160
Human immunodeficiency virus type 1 group M subtype C (isolate ETH2220)
940
Q75008
413
418
NMWQGV
13
WxxL
No
Envelope glycoprotein gp160
Human immunodeficiency virus type 1 group M subtype C (isolate ETH2220)
941
Q75008
473
478
YKYKVV
5
WxxL
No
Envelope glycoprotein gp160
Human immunodeficiency virus type 1 group M subtype C (isolate ETH2220)
942
Q75008
624
629
SNYTDI
11
WxxL
No
Envelope glycoprotein gp160
Human immunodeficiency virus type 1 group M subtype C (isolate ETH2220)
943
Q75008
652
657
DKWENL
17
WxxL
No
Envelope glycoprotein gp160
Human immunodeficiency virus type 1 group M subtype C (isolate ETH2220)
944
Q75008
658
663
WNWFNI
8
WxxL
No
Envelope glycoprotein gp160
Human immunodeficiency virus type 1 group M subtype C (isolate ETH2220)
945
Q75008
667
672
LWYIKI
5
WxxL
No
Envelope glycoprotein gp160
Human immunodeficiency virus type 1 group M subtype C (isolate ETH2220)
946
Q75008
685
690
IIFAVL
2
WxxL
No
Envelope glycoprotein gp160
Human immunodeficiency virus type 1 group M subtype C (isolate ETH2220)
947
Q75008
698
703
QGYSPL
8
WxxL
No
Envelope glycoprotein gp160
Human immunodeficiency virus type 1 group M subtype C (isolate ETH2220)
948
Q75008
738
743
NGFLAI
9
WxxL
No
Envelope glycoprotein gp160
Human immunodeficiency virus type 1 group M subtype C (isolate ETH2220)
949
Q75008
754
759
FSYHRL
8
WxxL
No
Envelope glycoprotein gp160
Human immunodeficiency virus type 1 group M subtype C (isolate ETH2220)
950
Q75008
795
800
VQYWGL
1
WxxL
No
Envelope glycoprotein gp160
Human immunodeficiency virus type 1 group M subtype C (isolate ETH2220)
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Ioannis Nezis lab
|
University of Warwick