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LIR Motif Search
LIR-containing proteins in
Retroviridae
>> EXPORT DATA
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S.No.
Uniprot ID
Start
End
LIR sequence
PSSM Score
▲
▼
Pattern
LIR in Anchor
Description
Species
301
P35961
666
671
LWYIKI
5
WxxL
No
Envelope glycoprotein gp160
Human immunodeficiency virus type 1 group M subtype B (isolate YU-2)
302
P35961
684
689
IVFVVL
6
WxxL
No
Envelope glycoprotein gp160
Human immunodeficiency virus type 1 group M subtype B (isolate YU-2)
303
P35961
697
702
QGYSPL
8
WxxL
No
Envelope glycoprotein gp160
Human immunodeficiency virus type 1 group M subtype B (isolate YU-2)
304
P35961
753
758
FSYHRL
8
WxxL
No
Envelope glycoprotein gp160
Human immunodeficiency virus type 1 group M subtype B (isolate YU-2)
305
P35961
775
780
RGWGVL
15
WxxL
No
Envelope glycoprotein gp160
Human immunodeficiency virus type 1 group M subtype B (isolate YU-2)
306
P35961
781
786
KYWWNL
7
WxxL
No
Envelope glycoprotein gp160
Human immunodeficiency virus type 1 group M subtype B (isolate YU-2)
307
P35961
822
827
RAFRAV
4
WxxL
No
Envelope glycoprotein gp160
Human immunodeficiency virus type 1 group M subtype B (isolate YU-2)
308
P12487
712
717
LSFQTL
10
xLIR
No
Envelope glycoprotein gp160
Human immunodeficiency virus type 1 group M subtype D (isolate Z2/CDC-Z34)
309
P12487
785
790
RGWEAL
19
xLIR
No
Envelope glycoprotein gp160
Human immunodeficiency virus type 1 group M subtype D (isolate Z2/CDC-Z34)
310
P12487
32
37
NLWVTV
13
WxxL
No
Envelope glycoprotein gp160
Human immunodeficiency virus type 1 group M subtype D (isolate Z2/CDC-Z34)
311
P12487
171
176
ALFYRL
2
WxxL
No
Envelope glycoprotein gp160
Human immunodeficiency virus type 1 group M subtype D (isolate Z2/CDC-Z34)
312
P12487
190
195
TNYRLI
6
WxxL
No
Envelope glycoprotein gp160
Human immunodeficiency virus type 1 group M subtype D (isolate Z2/CDC-Z34)
313
P12487
209
214
VSFEPI
9
WxxL
No
Envelope glycoprotein gp160
Human immunodeficiency virus type 1 group M subtype D (isolate Z2/CDC-Z34)
314
P12487
222
227
AGFAIL
8
WxxL
No
Envelope glycoprotein gp160
Human immunodeficiency virus type 1 group M subtype D (isolate Z2/CDC-Z34)
315
P12487
299
304
RPYRNI
4
WxxL
No
Envelope glycoprotein gp160
Human immunodeficiency virus type 1 group M subtype D (isolate Z2/CDC-Z34)
316
P12487
327
332
QAYCNI
1
WxxL
No
Envelope glycoprotein gp160
Human immunodeficiency virus type 1 group M subtype D (isolate Z2/CDC-Z34)
317
P12487
422
427
NMWQGV
13
WxxL
Yes
Envelope glycoprotein gp160
Human immunodeficiency virus type 1 group M subtype D (isolate Z2/CDC-Z34)
318
P12487
481
486
YKYKVV
5
WxxL
Yes
Envelope glycoprotein gp160
Human immunodeficiency virus type 1 group M subtype D (isolate Z2/CDC-Z34)
319
P12487
633
638
DNYTGL
11
WxxL
No
Envelope glycoprotein gp160
Human immunodeficiency virus type 1 group M subtype D (isolate Z2/CDC-Z34)
320
P12487
661
666
DKWASL
15
WxxL
No
Envelope glycoprotein gp160
Human immunodeficiency virus type 1 group M subtype D (isolate Z2/CDC-Z34)
321
P12487
667
672
WNWFNI
8
WxxL
No
Envelope glycoprotein gp160
Human immunodeficiency virus type 1 group M subtype D (isolate Z2/CDC-Z34)
322
P12487
676
681
LWYIKI
5
WxxL
No
Envelope glycoprotein gp160
Human immunodeficiency virus type 1 group M subtype D (isolate Z2/CDC-Z34)
323
P12487
694
699
IVFAVL
2
WxxL
No
Envelope glycoprotein gp160
Human immunodeficiency virus type 1 group M subtype D (isolate Z2/CDC-Z34)
324
P12487
707
712
QGYSPL
8
WxxL
No
Envelope glycoprotein gp160
Human immunodeficiency virus type 1 group M subtype D (isolate Z2/CDC-Z34)
325
P12487
747
752
NGFSAL
7
WxxL
No
Envelope glycoprotein gp160
Human immunodeficiency virus type 1 group M subtype D (isolate Z2/CDC-Z34)
326
P12487
763
768
FSYHRL
8
WxxL
No
Envelope glycoprotein gp160
Human immunodeficiency virus type 1 group M subtype D (isolate Z2/CDC-Z34)
327
P12487
792
797
YLWNLL
8
WxxL
No
Envelope glycoprotein gp160
Human immunodeficiency virus type 1 group M subtype D (isolate Z2/CDC-Z34)
328
Q74126
61
66
DDYQEI
19
xLIR
No
Envelope glycoprotein gp160
Human immunodeficiency virus type 2 subtype A (isolate KR)
329
Q74126
672
677
GVYVII
9
xLIR
No
Envelope glycoprotein gp160
Human immunodeficiency virus type 2 subtype A (isolate KR)
330
Q74126
22
27
AQYVTV
10
WxxL
No
Envelope glycoprotein gp160
Human immunodeficiency virus type 2 subtype A (isolate KR)
331
Q74126
49
54
DTWGTI
17
WxxL
No
Envelope glycoprotein gp160
Human immunodeficiency virus type 2 subtype A (isolate KR)
332
Q74126
419
424
NTWHRV
11
WxxL
No
Envelope glycoprotein gp160
Human immunodeficiency virus type 2 subtype A (isolate KR)
333
Q74126
474
479
GDYKLV
12
WxxL
No
Envelope glycoprotein gp160
Human immunodeficiency virus type 2 subtype A (isolate KR)
334
Q74126
534
539
LYWAGI
7
WxxL
No
Envelope glycoprotein gp160
Human immunodeficiency virus type 2 subtype A (isolate KR)
335
Q74126
589
594
CAFRQV
-1
WxxL
No
Envelope glycoprotein gp160
Human immunodeficiency virus type 2 subtype A (isolate KR)
336
Q74126
657
662
GNWFDL
13
WxxL
No
Envelope glycoprotein gp160
Human immunodeficiency virus type 2 subtype A (isolate KR)
337
Q74126
697
702
KGYRPV
7
WxxL
No
Envelope glycoprotein gp160
Human immunodeficiency virus type 2 subtype A (isolate KR)
338
Q74126
771
776
RSFPTL
8
WxxL
No
Envelope glycoprotein gp160
Human immunodeficiency virus type 2 subtype A (isolate KR)
339
Q74126
778
783
LIFQSL
5
WxxL
No
Envelope glycoprotein gp160
Human immunodeficiency virus type 2 subtype A (isolate KR)
340
Q74126
791
796
RDWLRL
21
WxxL
No
Envelope glycoprotein gp160
Human immunodeficiency virus type 2 subtype A (isolate KR)
341
Q74126
825
830
SAWRDL
12
WxxL
No
Envelope glycoprotein gp160
Human immunodeficiency virus type 2 subtype A (isolate KR)
342
P12449
61
66
DDYQEI
19
xLIR
No
Envelope glycoprotein gp160
Human immunodeficiency virus type 2 subtype A (isolate SBLISY)
343
P12449
221
226
PGFVLL
11
xLIR
No
Envelope glycoprotein gp160
Human immunodeficiency virus type 2 subtype A (isolate SBLISY)
344
P12449
22
27
TKYVTV
9
WxxL
No
Envelope glycoprotein gp160
Human immunodeficiency virus type 2 subtype A (isolate SBLISY)
345
P12449
49
54
DTWGTI
17
WxxL
No
Envelope glycoprotein gp160
Human immunodeficiency virus type 2 subtype A (isolate SBLISY)
346
P12449
75
80
DAWDNI
16
WxxL
No
Envelope glycoprotein gp160
Human immunodeficiency virus type 2 subtype A (isolate SBLISY)
347
P12449
287
292
NKYYNL
3
WxxL
Yes
Envelope glycoprotein gp160
Human immunodeficiency virus type 2 subtype A (isolate SBLISY)
348
P12449
418
423
NTWHKV
12
WxxL
No
Envelope glycoprotein gp160
Human immunodeficiency virus type 2 subtype A (isolate SBLISY)
349
P12449
474
479
GDYKLV
12
WxxL
No
Envelope glycoprotein gp160
Human immunodeficiency virus type 2 subtype A (isolate SBLISY)
350
P12449
534
539
TLFRGI
0
WxxL
No
Envelope glycoprotein gp160
Human immunodeficiency virus type 2 subtype A (isolate SBLISY)
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Ioannis Nezis lab
|
University of Warwick