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LIR Motif Search
LIR-containing proteins in
Retroviridae
>> EXPORT DATA
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S.No.
Uniprot ID
Start
End
LIR sequence
PSSM Score
▲
▼
Pattern
LIR in Anchor
Description
Species
3501
O12157
151
156
NAWVKV
13
WxxL
Yes
Gag polyprotein
Human immunodeficiency virus type 1 group M subtype C (isolate 92BR025)
3502
O12157
208
213
AEWDRL
18
WxxL
No
Gag polyprotein
Human immunodeficiency virus type 1 group M subtype C (isolate 92BR025)
3503
O12157
261
266
KRWIIL
15
WxxL
No
Gag polyprotein
Human immunodeficiency virus type 1 group M subtype C (isolate 92BR025)
3504
O12157
273
278
RMYSPV
9
WxxL
No
Gag polyprotein
Human immunodeficiency virus type 1 group M subtype C (isolate 92BR025)
3505
O12157
297
302
RFFKTL
5
WxxL
No
Gag polyprotein
Human immunodeficiency virus type 1 group M subtype C (isolate 92BR025)
3506
Q9QBY4
166
171
PMFTAL
10
xLIR
Yes
Gag polyprotein
Human immunodeficiency virus type 1 group M subtype K (isolate 96CM-MP535)
3507
Q9QBY4
14
19
DAWEKI
18
WxxL
No
Gag polyprotein
Human immunodeficiency virus type 1 group M subtype K (isolate 96CM-MP535)
3508
Q9QBY4
77
82
SLYNTI
6
WxxL
No
Gag polyprotein
Human immunodeficiency virus type 1 group M subtype K (isolate 96CM-MP535)
3509
Q9QBY4
126
131
QNYPIV
5
WxxL
No
Gag polyprotein
Human immunodeficiency virus type 1 group M subtype K (isolate 96CM-MP535)
3510
Q9QBY4
149
154
NAWVKV
13
WxxL
Yes
Gag polyprotein
Human immunodeficiency virus type 1 group M subtype K (isolate 96CM-MP535)
3511
Q9QBY4
206
211
AEWDRL
18
WxxL
No
Gag polyprotein
Human immunodeficiency virus type 1 group M subtype K (isolate 96CM-MP535)
3512
Q9QBY4
259
264
KRWIIL
15
WxxL
No
Gag polyprotein
Human immunodeficiency virus type 1 group M subtype K (isolate 96CM-MP535)
3513
Q9QBY4
271
276
RMYSPV
9
WxxL
No
Gag polyprotein
Human immunodeficiency virus type 1 group M subtype K (isolate 96CM-MP535)
3514
Q9QBY4
295
300
RFFKTL
5
WxxL
No
Gag polyprotein
Human immunodeficiency virus type 1 group M subtype K (isolate 96CM-MP535)
3515
P03347
14
19
DRWEKI
18
WxxL
No
Gag polyprotein
Human immunodeficiency virus type 1 group M subtype B (isolate BH10)
3516
P03347
77
82
SLYNTV
5
WxxL
Yes
Gag polyprotein
Human immunodeficiency virus type 1 group M subtype B (isolate BH10)
3517
P03347
130
135
QNYPIV
5
WxxL
No
Gag polyprotein
Human immunodeficiency virus type 1 group M subtype B (isolate BH10)
3518
P03347
153
158
NAWVKV
13
WxxL
Yes
Gag polyprotein
Human immunodeficiency virus type 1 group M subtype B (isolate BH10)
3519
P03347
170
175
PMFSAL
8
WxxL
Yes
Gag polyprotein
Human immunodeficiency virus type 1 group M subtype B (isolate BH10)
3520
P03347
210
215
AEWDRV
17
WxxL
No
Gag polyprotein
Human immunodeficiency virus type 1 group M subtype B (isolate BH10)
3521
P03347
263
268
KRWIIL
15
WxxL
No
Gag polyprotein
Human immunodeficiency virus type 1 group M subtype B (isolate BH10)
3522
P03347
299
304
RFYKTL
6
WxxL
No
Gag polyprotein
Human immunodeficiency virus type 1 group M subtype B (isolate BH10)
3523
P11284
208
213
EDWDDL
23
xLIR
No
Gag polyprotein
Mouse mammary tumor virus (strain C3H)
3524
P11284
283
288
PVWEPL
14
xLIR
No
Gag polyprotein
Mouse mammary tumor virus (strain C3H)
3525
P11284
10
15
KLFVSV
6
WxxL
No
Gag polyprotein
Mouse mammary tumor virus (strain C3H)
3526
P11284
34
39
EFYQFL
8
WxxL
No
Gag polyprotein
Mouse mammary tumor virus (strain C3H)
3527
P11284
55
60
QDWKRV
16
WxxL
No
Gag polyprotein
Mouse mammary tumor virus (strain C3H)
3528
P11284
82
87
PIWLQL
12
WxxL
No
Gag polyprotein
Mouse mammary tumor virus (strain C3H)
3529
P11284
134
139
TAYAEI
5
WxxL
No
Gag polyprotein
Mouse mammary tumor virus (strain C3H)
3530
P11284
267
272
FTFPVV
7
WxxL
Yes
Gag polyprotein
Mouse mammary tumor virus (strain C3H)
3531
P11284
400
405
LAWRAI
10
WxxL
No
Gag polyprotein
Mouse mammary tumor virus (strain C3H)
3532
P29175
14
19
EHWGDV
10
WxxL
No
Gag polyprotein
FBR murine osteosarcoma virus
3533
P29175
84
89
VTWEAI
16
WxxL
Yes
Gag polyprotein
FBR murine osteosarcoma virus
3534
P29175
127
132
ALYPAL
3
WxxL
Yes
Gag polyprotein
FBR murine osteosarcoma virus
3535
O92954
49
54
GSWDPI
18
xLIR
No
Gag-Pro polyprotein
Rous sarcoma virus (strain Schmidt-Ruppin B)
3536
O92954
72
77
KTWGLV
12
WxxL
Yes
Gag-Pro polyprotein
Rous sarcoma virus (strain Schmidt-Ruppin B)
3537
O92954
95
100
KFWLGL
10
WxxL
Yes
Gag-Pro polyprotein
Rous sarcoma virus (strain Schmidt-Ruppin B)
3538
O92954
179
184
GLYPSL
3
WxxL
Yes
Gag-Pro polyprotein
Rous sarcoma virus (strain Schmidt-Ruppin B)
3539
O92954
220
225
TDWARI
16
WxxL
Yes
Gag-Pro polyprotein
Rous sarcoma virus (strain Schmidt-Ruppin B)
3540
O92954
248
253
PAWTPL
14
WxxL
No
Gag-Pro polyprotein
Rous sarcoma virus (strain Schmidt-Ruppin B)
3541
O92954
377
382
QAFREV
3
WxxL
Yes
Gag-Pro polyprotein
Rous sarcoma virus (strain Schmidt-Ruppin B)
3542
O92954
390
395
GPWADI
11
WxxL
No
Gag-Pro polyprotein
Rous sarcoma virus (strain Schmidt-Ruppin B)
3543
O92954
629
634
TDWPVV
16
WxxL
No
Gag-Pro polyprotein
Rous sarcoma virus (strain Schmidt-Ruppin B)
3544
O92954
673
678
LLFPAV
0
WxxL
No
Gag-Pro polyprotein
Rous sarcoma virus (strain Schmidt-Ruppin B)
3545
P17282
14
19
DRWEKV
17
WxxL
No
Gag polyprotein
Simian immunodeficiency virus (isolate CPZ GAB1)
3546
P17282
77
82
SLFNTL
5
WxxL
No
Gag polyprotein
Simian immunodeficiency virus (isolate CPZ GAB1)
3547
P17282
138
143
GNYPLV
5
WxxL
Yes
Gag polyprotein
Simian immunodeficiency virus (isolate CPZ GAB1)
3548
P17282
161
166
NAWVKV
13
WxxL
Yes
Gag polyprotein
Simian immunodeficiency virus (isolate CPZ GAB1)
3549
P17282
178
183
PMFSAL
8
WxxL
Yes
Gag polyprotein
Simian immunodeficiency virus (isolate CPZ GAB1)
3550
P17282
218
223
AEWDRL
18
WxxL
No
Gag polyprotein
Simian immunodeficiency virus (isolate CPZ GAB1)
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Ioannis Nezis lab
|
University of Warwick