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LIR Motif Search
LIR-containing proteins in
Retroviridae
>> EXPORT DATA
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S.No.
Uniprot ID
Start
End
LIR sequence
PSSM Score
▲
▼
Pattern
LIR in Anchor
Description
Species
3651
P05890
299
304
RFYKTL
6
WxxL
No
Gag polyprotein
Human immunodeficiency virus type 1 group M subtype B (isolate RF/HAT3)
3652
O89939
14
19
DAWEKI
18
WxxL
No
Gag polyprotein
Human immunodeficiency virus type 1 group M subtype G (isolate SE6165)
3653
O89939
77
82
SLYNAV
4
WxxL
No
Gag polyprotein
Human immunodeficiency virus type 1 group M subtype G (isolate SE6165)
3654
O89939
130
135
QNYPIV
5
WxxL
No
Gag polyprotein
Human immunodeficiency virus type 1 group M subtype G (isolate SE6165)
3655
O89939
153
158
NAWVKV
13
WxxL
Yes
Gag polyprotein
Human immunodeficiency virus type 1 group M subtype G (isolate SE6165)
3656
O89939
170
175
PMFSAL
8
WxxL
Yes
Gag polyprotein
Human immunodeficiency virus type 1 group M subtype G (isolate SE6165)
3657
O89939
263
268
KRWIIL
15
WxxL
No
Gag polyprotein
Human immunodeficiency virus type 1 group M subtype G (isolate SE6165)
3658
O89939
275
280
RMYSPV
9
WxxL
No
Gag polyprotein
Human immunodeficiency virus type 1 group M subtype G (isolate SE6165)
3659
O89939
299
304
RFFKCL
2
WxxL
No
Gag polyprotein
Human immunodeficiency virus type 1 group M subtype G (isolate SE6165)
3660
O89939
482
487
ELYPSL
4
WxxL
Yes
Gag polyprotein
Human immunodeficiency virus type 1 group M subtype G (isolate SE6165)
3661
Q9QSR4
14
19
DEWEKI
22
xLIR
No
Gag polyprotein
Human immunodeficiency virus type 1 group M subtype F1 (isolate VI850)
3662
Q9QSR4
77
82
SLFNTV
4
WxxL
Yes
Gag polyprotein
Human immunodeficiency virus type 1 group M subtype F1 (isolate VI850)
3663
Q9QSR4
126
131
QNYPIV
5
WxxL
No
Gag polyprotein
Human immunodeficiency virus type 1 group M subtype F1 (isolate VI850)
3664
Q9QSR4
149
154
NAWVKV
13
WxxL
Yes
Gag polyprotein
Human immunodeficiency virus type 1 group M subtype F1 (isolate VI850)
3665
Q9QSR4
166
171
PMFSAL
8
WxxL
Yes
Gag polyprotein
Human immunodeficiency virus type 1 group M subtype F1 (isolate VI850)
3666
Q9QSR4
206
211
AEWDRL
18
WxxL
No
Gag polyprotein
Human immunodeficiency virus type 1 group M subtype F1 (isolate VI850)
3667
Q9QSR4
259
264
KRWIIL
15
WxxL
No
Gag polyprotein
Human immunodeficiency virus type 1 group M subtype F1 (isolate VI850)
3668
Q9QSR4
271
276
RMYSPV
9
WxxL
No
Gag polyprotein
Human immunodeficiency virus type 1 group M subtype F1 (isolate VI850)
3669
Q9QSR4
294
299
DRFFKV
6
WxxL
No
Gag polyprotein
Human immunodeficiency virus type 1 group M subtype F1 (isolate VI850)
3670
Q9QSR4
475
480
ELYPPL
4
WxxL
Yes
Gag polyprotein
Human immunodeficiency virus type 1 group M subtype F1 (isolate VI850)
3671
Q9IDV8
14
19
DQWEAI
19
WxxL
No
Gag polyprotein
Human immunodeficiency virus type 1 group N (isolate YBF106)
3672
Q9IDV8
132
137
RNYPLV
6
WxxL
Yes
Gag polyprotein
Human immunodeficiency virus type 1 group N (isolate YBF106)
3673
Q9IDV8
155
160
NAWVKV
13
WxxL
Yes
Gag polyprotein
Human immunodeficiency virus type 1 group N (isolate YBF106)
3674
Q9IDV8
172
177
PMFMAL
8
WxxL
Yes
Gag polyprotein
Human immunodeficiency virus type 1 group N (isolate YBF106)
3675
Q9IDV8
265
270
RRWIVL
16
WxxL
No
Gag polyprotein
Human immunodeficiency virus type 1 group N (isolate YBF106)
3676
Q9IDV8
277
282
RMYSPV
9
WxxL
No
Gag polyprotein
Human immunodeficiency virus type 1 group N (isolate YBF106)
3677
Q9IDV8
301
306
RFYKTL
6
WxxL
No
Gag polyprotein
Human immunodeficiency virus type 1 group N (isolate YBF106)
3678
Q9IDV8
383
388
GNFKGI
5
WxxL
No
Gag polyprotein
Human immunodeficiency virus type 1 group N (isolate YBF106)
3679
Q9IDV8
492
497
SLYPPL
4
WxxL
Yes
Gag polyprotein
Human immunodeficiency virus type 1 group N (isolate YBF106)
3680
P15832
167
172
PGFQAL
10
xLIR
No
Gag polyprotein
Human immunodeficiency virus type 2 subtype B (isolate D205)
3681
P15832
77
82
SLFNIV
4
WxxL
No
Gag polyprotein
Human immunodeficiency virus type 2 subtype B (isolate D205)
3682
P15832
137
142
GNYVHL
11
WxxL
No
Gag polyprotein
Human immunodeficiency virus type 2 subtype B (isolate D205)
3683
P15832
150
155
NAWVKL
14
WxxL
No
Gag polyprotein
Human immunodeficiency virus type 2 subtype B (isolate D205)
3684
P15832
260
265
RRWIQL
14
WxxL
No
Gag polyprotein
Human immunodeficiency virus type 2 subtype B (isolate D205)
3685
P15832
296
301
RFYKSL
5
WxxL
No
Gag polyprotein
Human immunodeficiency virus type 2 subtype B (isolate D205)
3686
P15832
373
378
IPFAAV
1
WxxL
No
Gag polyprotein
Human immunodeficiency virus type 2 subtype B (isolate D205)
3687
P15832
429
434
AGFLGL
8
WxxL
Yes
Gag polyprotein
Human immunodeficiency virus type 2 subtype B (isolate D205)
3688
P15832
501
506
RPYKEV
7
WxxL
Yes
Gag polyprotein
Human immunodeficiency virus type 2 subtype B (isolate D205)
3689
Q74119
172
177
PGFQAL
10
xLIR
No
Gag polyprotein
Human immunodeficiency virus type 2 subtype A (isolate KR)
3690
Q74119
77
82
SLFNTV
4
WxxL
No
Gag polyprotein
Human immunodeficiency virus type 2 subtype A (isolate KR)
3691
Q74119
142
147
GNYSHV
7
WxxL
No
Gag polyprotein
Human immunodeficiency virus type 2 subtype A (isolate KR)
3692
Q74119
155
160
NAWVKL
14
WxxL
No
Gag polyprotein
Human immunodeficiency virus type 2 subtype A (isolate KR)
3693
Q74119
265
270
RRWIQI
14
WxxL
No
Gag polyprotein
Human immunodeficiency virus type 2 subtype A (isolate KR)
3694
Q74119
301
306
RFYKSL
5
WxxL
No
Gag polyprotein
Human immunodeficiency virus type 2 subtype A (isolate KR)
3695
Q74119
430
435
AGFLGI
8
WxxL
Yes
Gag polyprotein
Human immunodeficiency virus type 2 subtype A (isolate KR)
3696
Q74119
484
489
RPYKEV
7
WxxL
Yes
Gag polyprotein
Human immunodeficiency virus type 2 subtype A (isolate KR)
3697
P20874
172
177
PGFQAL
10
xLIR
Yes
Gag polyprotein
Human immunodeficiency virus type 2 subtype A (isolate ST)
3698
P20874
77
82
SLFNTV
4
WxxL
No
Gag polyprotein
Human immunodeficiency virus type 2 subtype A (isolate ST)
3699
P20874
142
147
GNYTHV
9
WxxL
No
Gag polyprotein
Human immunodeficiency virus type 2 subtype A (isolate ST)
3700
P20874
155
160
NAWVKL
14
WxxL
Yes
Gag polyprotein
Human immunodeficiency virus type 2 subtype A (isolate ST)
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Ioannis Nezis lab
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