LIR-containing proteins in  Retroviridae   >> EXPORT DATA


S.No. Uniprot ID Start End LIR sequence PSSM Score ▲  ▼ Pattern LIR in Anchor Description Species
4101Q9IDV1 11 16 VGWPEI 12 WxxL No Protein Nef Human immunodeficiency virus type 1 group N (isolate YBF106)
4102Q9IDV1 142 147 WCFKLV 0 WxxL No Protein Nef Human immunodeficiency virus type 1 group N (isolate YBF106)
4103O12165 37 42 DKYGAL 8 WxxL No Protein Nef Human immunodeficiency virus type 1 group M subtype C (isolate 92BR025)
4104O12165 79 84 MTYKAV 6 WxxL No Protein Nef Human immunodeficiency virus type 1 group M subtype C (isolate 92BR025)
4105O12165 141 146 WCFKLV 0 WxxL No Protein Nef Human immunodeficiency virus type 1 group M subtype C (isolate 92BR025)
4106O12165 183 188 WKFDSL 6 WxxL No Protein Nef Human immunodeficiency virus type 1 group M subtype C (isolate 92BR025)
4107P04603 11 16 VGWPKI 11 WxxL Yes Protein Nef Human immunodeficiency virus type 1 group M subtype A (isolate MAL)
4108P04603 144 149 WCFKLV 0 WxxL No Protein Nef Human immunodeficiency virus type 1 group M subtype A (isolate MAL)
4109Q9WC61 7 12 KSWPQV 11 WxxL Yes Protein Nef Human immunodeficiency virus type 1 group M subtype J (isolate SE9280)
4110Q9WC61 138 143 WCYKLV 1 WxxL No Protein Nef Human immunodeficiency virus type 1 group M subtype J (isolate SE9280)
4111P20886 11 16 KGWPTI 14 WxxL Yes Protein Nef Human immunodeficiency virus type 1 group M subtype B (isolate OYI)
4112P20886 146 151 WCFKLV 0 WxxL No Protein Nef Human immunodeficiency virus type 1 group M subtype B (isolate OYI)
4113Q9Q713 11 16 SGWPAV 13 WxxL Yes Protein Nef Human immunodeficiency virus type 1 group M subtype H (isolate VI991)
4114Q9Q713 142 147 WCFKLV 0 WxxL Yes Protein Nef Human immunodeficiency virus type 1 group M subtype H (isolate VI991)
4115Q74127 169 174 KFFGWL -2 WxxL No Protein Nef Human immunodeficiency virus type 2 subtype A (isolate KR)
4116P20868 30 35 GHWDKL 15 WxxL Yes Protein Nef Human immunodeficiency virus type 2 subtype A (isolate ST)
4117P20868 168 173 KFFGWL -2 WxxL No Protein Nef Human immunodeficiency virus type 2 subtype A (isolate ST)
4118P04602 11 16 VGWPAI 11 WxxL Yes Protein Nef Human immunodeficiency virus type 1 group M subtype D (isolate Z6)
4119P04602 147 152 WCFELV 3 WxxL No Protein Nef Human immunodeficiency virus type 1 group M subtype D (isolate Z6)
4120P0C0N9 14 19 YDYDSV 13 WxxL Yes Viral myc transforming protein Avian retrovirus MH2
4121P0C0N9 54 59 KKFELL 9 WxxL No Viral myc transforming protein Avian retrovirus MH2
4122P0C0N9 345 350 LSFFAL 6 WxxL Yes Viral myc transforming protein Avian retrovirus MH2
4123P03407 11 16 GGWSAI 15 WxxL Yes Protein Nef Human immunodeficiency virus type 1 group M subtype B (isolate ARV2/SF2)
4124P03407 145 150 WCFKLV 0 WxxL No Protein Nef Human immunodeficiency virus type 1 group M subtype B (isolate ARV2/SF2)
4125P12479 9 14 AGWSTV 15 WxxL Yes Protein Nef Human immunodeficiency virus type 1 group M subtype B (isolate BRVA)
4126P12479 153 158 WCFKLV 0 WxxL No Protein Nef Human immunodeficiency virus type 1 group M subtype B (isolate BRVA)
4127P04601 11 16 IGWPTV 11 WxxL Yes Protein Nef Human immunodeficiency virus type 1 group M subtype B (isolate HXB2)
4128P04601 141 146 WCYKLV 1 WxxL No Protein Nef Human immunodeficiency virus type 1 group M subtype B (isolate HXB2)
4129P04601 189 194 LAFHHV 2 WxxL No Protein Nef Human immunodeficiency virus type 1 group M subtype B (isolate HXB2)
4130Q79671 11 16 AGWSEV 15 WxxL Yes Protein Nef Human immunodeficiency virus type 1 group O (isolate MVP5180)
4131Q79671 142 147 LTFGWL 2 WxxL No Protein Nef Human immunodeficiency virus type 1 group O (isolate MVP5180)
4132P19546 10 15 SGWSAV 15 WxxL Yes Protein Nef Human immunodeficiency virus type 1 group M subtype B (isolate SF162)
4133P19546 143 148 WCFKLV 0 WxxL No Protein Nef Human immunodeficiency virus type 1 group M subtype B (isolate SF162)
4134P05858 11 16 GGWPAV 12 WxxL Yes Protein Nef Human immunodeficiency virus type 1 group M subtype B (isolate RF/HAT3)
4135P05858 143 148 WCFKLV 0 WxxL No Protein Nef Human immunodeficiency virus type 1 group M subtype B (isolate RF/HAT3)
4136P05858 191 196 LAFHHV 2 WxxL No Protein Nef Human immunodeficiency virus type 1 group M subtype B (isolate RF/HAT3)
4137P17664 11 16 VGWPEV 11 WxxL Yes Protein Nef Simian immunodeficiency virus (isolate CPZ GAB1)
4138P17664 141 146 WCFKLV 0 WxxL No Protein Nef Simian immunodeficiency virus (isolate CPZ GAB1)
4139Q1A242 11 16 VGWPQV 9 WxxL Yes Protein Nef Simian immunodeficiency virus (isolate EK505)
4140Q1A242 141 146 WCFKLV 0 WxxL No Protein Nef Simian immunodeficiency virus (isolate EK505)
4141Q1A260 11 16 VGWPEV 11 WxxL No Protein Nef Simian immunodeficiency virus (isolate MB66)
4142Q1A260 141 146 WCFKLV 0 WxxL No Protein Nef Simian immunodeficiency virus (isolate MB66)
4143P17753 169 174 MYFGWL -3 WxxL No Protein Nef Human immunodeficiency virus type 2 subtype A (isolate D194)
4144P31818 26 31 ETYERL 12 WxxL Yes Protein Nef Simian immunodeficiency virus (isolate 1A11)
4145P31818 169 174 KTFGWL 3 WxxL No Protein Nef Simian immunodeficiency virus (isolate 1A11)
4146P31818 205 210 DPWGEV 13 WxxL No Protein Nef Simian immunodeficiency virus (isolate 1A11)
4147P12482 26 31 ETYGRL 7 WxxL No Protein Nef Simian immunodeficiency virus (isolate F236/smH4)
4148P12482 169 174 MHYGWL -1 WxxL No Protein Nef Simian immunodeficiency virus (isolate F236/smH4)
4149P12482 205 210 DPWGEV 13 WxxL No Protein Nef Simian immunodeficiency virus (isolate F236/smH4)
4150P04324 11 16 VGWPAV 10 WxxL Yes Protein Nef Human immunodeficiency virus type 1 group M subtype B (isolate PCV12)








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