LIR-containing proteins in  Retroviridae   >> EXPORT DATA


S.No. Uniprot ID Start End LIR sequence PSSM Score    Pattern LIR in Anchor Description Species
351A1Z651 620 625 CPYPLL 1 WxxL Yes Gag-Pol polyprotein Xenotropic MuLV-related virus (isolate VP62)
352A1Z651 1127 1132 VQFGPV 1 WxxL No Gag-Pol polyprotein Xenotropic MuLV-related virus (isolate VP62)
353Q79666 437 442 NFFREV 1 WxxL Yes Gag-Pol polyprotein Human immunodeficiency virus type 1 group O (isolate MVP5180)
354P12497 856 861 QIYAGI 1 WxxL No Gag-Pol polyprotein Human immunodeficiency virus type 1 group M subtype B (isolate NY5)
355P11368 286 291 PLFWYL 1 WxxL No Putative Pol polyprotein Mouse intracisternal a-particle MIA14
356P31623 183 188 QRFPQL 1 WxxL No Pol polyprotein Sheep pulmonary adenomatosis virus
357P03356 83 88 CPYPLL 1 WxxL Yes Pol polyprotein AKV murine leukemia virus
358P03356 590 595 VQFGPV 1 WxxL No Pol polyprotein AKV murine leukemia virus
359P26808 88 93 CPYPLL 1 WxxL Yes Pol polyprotein Friend murine leukemia virus (isolate PVC-211)
360P05897 1020 1025 LVFNLV 1 WxxL No Gag-Pol polyprotein Simian immunodeficiency virus (isolate K6W)
361P19505 1021 1026 LVFNLV 1 WxxL No Gag-Pol polyprotein Simian immunodeficiency virus (isolate PBj14/BCL-3)
362P51517 209 214 QCFAQL 1 WxxL No Pol polyprotein Simian retrovirus SRV-2
363P32542 789 794 NSFGWV 1 WxxL No Pol polyprotein Equine infectious anemia virus (isolate CL22)
364P03369 858 863 QIYAGI 1 WxxL No Gag-Pol polyprotein Human immunodeficiency virus type 1 group M subtype B (isolate ARV2/SF2)
365P20892 855 860 QIYAGI 1 WxxL No Gag-Pol polyprotein Human immunodeficiency virus type 1 group M subtype B (isolate OYI)
366P24740 849 854 QIYAGI 1 WxxL No Gag-Pol polyprotein Human immunodeficiency virus type 1 group M subtype A (isolate U455)
367P35963 856 861 QIYAGI 1 WxxL No Gag-Pol polyprotein Human immunodeficiency virus type 1 group M subtype B (isolate YU-2)
368P0C211 991 996 HRFKNL 1 WxxL No Gag-Pro-Pol polyprotein Human T-cell leukemia virus 1 (isolate Melanesia mel5 subtype C)
369P0C211 1099 1104 YLYHYL 1 WxxL No Gag-Pro-Pol polyprotein Human T-cell leukemia virus 1 (isolate Melanesia mel5 subtype C)
370P0C211 1394 1399 WYYFKL 1 WxxL Yes Gag-Pro-Pol polyprotein Human T-cell leukemia virus 1 (isolate Melanesia mel5 subtype C)
371Q73368 856 861 QIYAGI 1 WxxL No Gag-Pol polyprotein Human immunodeficiency virus type 1 group M subtype B (strain 89.6)
372P15833 373 378 IPFAAV 1 WxxL No Gag-Pol polyprotein Human immunodeficiency virus type 2 subtype B (isolate D205)
373P05895 762 767 YQFNCL 1 WxxL No Gag-Pol polyprotein Simian immunodeficiency virus agm.vervet (isolate AGM TYO-1)
374Q2F7J3 329 334 VLYRQL 1 WxxL Yes Gag-Pol polyprotein Xenotropic MuLV-related virus (isolate VP35)
375Q2F7J3 620 625 CPYPLL 1 WxxL Yes Gag-Pol polyprotein Xenotropic MuLV-related virus (isolate VP35)
376Q2F7J3 1127 1132 VQFGPV 1 WxxL No Gag-Pol polyprotein Xenotropic MuLV-related virus (isolate VP35)
377Q7SQ98 855 860 PLFAGI 1 WxxL Yes Pol polyprotein Avian leukosis virus
378P10272 83 88 CPYPLL 1 WxxL No Pol polyprotein Baboon endogenous virus (strain M7)
379P31822 504 509 LWYGKI 1 WxxL No Pol polyprotein Feline immunodeficiency virus (isolate TM2)
380P14078 991 996 HRFKNL 1 WxxL No Gag-Pro-Pol polyprotein Human T-cell leukemia virus 1 (isolate Caribbea HS-35 subtype A)
381P14078 1099 1104 YLYHYL 1 WxxL No Gag-Pro-Pol polyprotein Human T-cell leukemia virus 1 (isolate Caribbea HS-35 subtype A)
382P14078 1394 1399 WYYFKL 1 WxxL Yes Gag-Pro-Pol polyprotein Human T-cell leukemia virus 1 (isolate Caribbea HS-35 subtype A)
383Q4U0X6 1372 1377 WYYYKI 1 WxxL No Gag-Pro-Pol polyprotein Human T-cell leukemia virus 3 (strain Pyl43)
384Q9QBZ9 427 432 NFFREV 1 WxxL Yes Gag-Pol polyprotein Human immunodeficiency virus type 1 group M subtype K (isolate 97ZR-EQTB11)
385P20875 860 865 QIYAGI 1 WxxL No Gag-Pol polyprotein Human immunodeficiency virus type 1 group M subtype B (isolate JRCSF)
386P11204 789 794 NSFGWV 1 WxxL No Pol polyprotein Equine infectious anemia virus (isolate 1369)
387P03371 788 793 NSFGWV 1 WxxL No Pol polyprotein Equine infectious anemia virus (strain Wyoming)
388Q82851 1252 1257 IVFCIL 1 WxxL No Gag-Pol polyprotein Jembrana disease virus
389P26810 88 93 CPYPLL 1 WxxL Yes Pol polyprotein Friend murine leukemia virus (isolate 57)
390P11227 83 88 CPYPLL 1 WxxL No Pol polyprotein Radiation murine leukemia virus
391P11227 590 595 VQFGPV 1 WxxL No Pol polyprotein Radiation murine leukemia virus
392P05896 1020 1025 LVFNLV 1 WxxL No Gag-Pol polyprotein Simian immunodeficiency virus (isolate Mm142-83)
393P27973 758 763 YQFNCL 1 WxxL No Gag-Pol polyprotein Simian immunodeficiency virus agm.vervet (isolate AGM155)
394P05961 862 867 QIYAGI 1 WxxL No Gag-Pol polyprotein Human immunodeficiency virus type 1 group M subtype B (isolate MN)
395P18802 853 858 QIYAGI 1 WxxL No Gag-Pol polyprotein Human immunodeficiency virus type 1 group M subtype D (isolate NDK)
396P05959 857 862 QIYAGI 1 WxxL No Gag-Pol polyprotein Human immunodeficiency virus type 1 group M subtype B (isolate RF/HAT3)
397P20876 1035 1040 LVFNLV 1 WxxL No Gag-Pol polyprotein Human immunodeficiency virus type 2 subtype A (isolate ST)
398P26809 88 93 CPYPLL 1 WxxL Yes Pol polyprotein Friend murine leukemia virus (isolate FB29)
399P03354 1563 1568 PLFAGI 1 WxxL Yes Gag-Pro-Pol polyprotein Rous sarcoma virus (strain Prague C)
400Q02836 753 758 YQFNCL 1 WxxL No Gag-Pol polyprotein Simian immunodeficiency virus agm.grivet (isolate AGM gr-1)









Copyright © Ioannis Nezis lab | University of Warwick