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LIR-containing proteins in
Secoviridae
>> EXPORT DATA
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S.No.
Uniprot ID
Start
End
LIR sequence
PSSM Score
▲
▼
Pattern
LIR in Anchor
Description
Species
1201
P35930
106
111
HEYIQL
9
WxxL
No
RNA1 polyprotein
Red clover mottle virus
1202
P35930
176
181
EYFYKV
3
WxxL
No
RNA1 polyprotein
Red clover mottle virus
1203
P35930
198
203
TVWDQI
12
WxxL
No
RNA1 polyprotein
Red clover mottle virus
1204
P35930
352
357
TSYGHL
6
WxxL
No
RNA1 polyprotein
Red clover mottle virus
1205
P35930
371
376
FAWKIL
14
WxxL
No
RNA1 polyprotein
Red clover mottle virus
1206
P35930
533
538
DDFAAV
13
WxxL
No
RNA1 polyprotein
Red clover mottle virus
1207
P35930
555
560
TPYSVV
5
WxxL
No
RNA1 polyprotein
Red clover mottle virus
1208
P35930
580
585
TNFLEV
8
WxxL
No
RNA1 polyprotein
Red clover mottle virus
1209
P35930
624
629
QSYNIL
8
WxxL
No
RNA1 polyprotein
Red clover mottle virus
1210
P35930
634
639
GRYNVV
5
WxxL
No
RNA1 polyprotein
Red clover mottle virus
1211
P35930
643
648
DNYEEL
15
WxxL
No
RNA1 polyprotein
Red clover mottle virus
1212
P35930
681
686
KKFEQV
7
WxxL
No
RNA1 polyprotein
Red clover mottle virus
1213
P35930
712
717
DDYHLL
15
WxxL
No
RNA1 polyprotein
Red clover mottle virus
1214
P35930
739
744
QWYGPV
0
WxxL
No
RNA1 polyprotein
Red clover mottle virus
1215
P35930
762
767
GAYEFL
10
WxxL
No
RNA1 polyprotein
Red clover mottle virus
1216
P35930
794
799
LEFCGV
3
WxxL
No
RNA1 polyprotein
Red clover mottle virus
1217
P35930
842
847
RMWEGI
17
WxxL
No
RNA1 polyprotein
Red clover mottle virus
1218
P35930
881
886
GFWKTV
10
WxxL
No
RNA1 polyprotein
Red clover mottle virus
1219
P35930
904
909
NSFSVV
7
WxxL
No
RNA1 polyprotein
Red clover mottle virus
1220
P35930
927
932
YRYKNV
1
WxxL
No
RNA1 polyprotein
Red clover mottle virus
1221
P35930
983
988
HFFCNL
-3
WxxL
No
RNA1 polyprotein
Red clover mottle virus
1222
P35930
1069
1074
PTWANV
11
WxxL
No
RNA1 polyprotein
Red clover mottle virus
1223
P35930
1157
1162
FNFYPI
7
WxxL
No
RNA1 polyprotein
Red clover mottle virus
1224
P35930
1179
1184
KLYIPL
7
WxxL
No
RNA1 polyprotein
Red clover mottle virus
1225
P35930
1257
1262
EWFDCL
5
WxxL
Yes
RNA1 polyprotein
Red clover mottle virus
1226
P35930
1295
1300
EGFPHV
6
WxxL
No
RNA1 polyprotein
Red clover mottle virus
1227
P35930
1331
1336
EAYETL
11
WxxL
No
RNA1 polyprotein
Red clover mottle virus
1228
P35930
1358
1363
LPFRKV
2
WxxL
No
RNA1 polyprotein
Red clover mottle virus
1229
P35930
1370
1375
RNFTIL
11
WxxL
No
RNA1 polyprotein
Red clover mottle virus
1230
P35930
1377
1382
MEYNIL
8
WxxL
No
RNA1 polyprotein
Red clover mottle virus
1231
P35930
1412
1417
MEWSIV
14
WxxL
No
RNA1 polyprotein
Red clover mottle virus
1232
P35930
1434
1439
SSFDGL
10
WxxL
No
RNA1 polyprotein
Red clover mottle virus
1233
P35930
1503
1508
SIFNEI
5
WxxL
No
RNA1 polyprotein
Red clover mottle virus
1234
P35930
1512
1517
YHYKLL
4
WxxL
No
RNA1 polyprotein
Red clover mottle virus
1235
P35930
1529
1534
QSFKNL
5
WxxL
No
RNA1 polyprotein
Red clover mottle virus
1236
P35930
1583
1588
LEFRRL
6
WxxL
No
RNA1 polyprotein
Red clover mottle virus
1237
P35930
1614
1619
SLWAQL
10
WxxL
No
RNA1 polyprotein
Red clover mottle virus
1238
P35930
1653
1658
VEFRRL
5
WxxL
No
RNA1 polyprotein
Red clover mottle virus
1239
P35930
1730
1735
LRYHTV
4
WxxL
No
RNA1 polyprotein
Red clover mottle virus
1240
P35930
1859
1864
FAFFNV
2
WxxL
No
RNA1 polyprotein
Red clover mottle virus
1241
Q6W8W4
204
209
KSFLAL
10
xLIR
No
RNA1 polyprotein
Raspberry ringspot virus (strain cherry)
1242
Q6W8W4
442
447
LDFDAV
13
xLIR
No
RNA1 polyprotein
Raspberry ringspot virus (strain cherry)
1243
Q6W8W4
1435
1440
LVFTEV
5
xLIR
No
RNA1 polyprotein
Raspberry ringspot virus (strain cherry)
1244
Q6W8W4
1817
1822
REWDDL
20
xLIR
No
RNA1 polyprotein
Raspberry ringspot virus (strain cherry)
1245
Q6W8W4
87
92
VGFPAL
4
WxxL
No
RNA1 polyprotein
Raspberry ringspot virus (strain cherry)
1246
Q6W8W4
95
100
LEYPAL
7
WxxL
No
RNA1 polyprotein
Raspberry ringspot virus (strain cherry)
1247
Q6W8W4
340
345
PEYFVV
9
WxxL
No
RNA1 polyprotein
Raspberry ringspot virus (strain cherry)
1248
Q6W8W4
417
422
DSFHCL
8
WxxL
No
RNA1 polyprotein
Raspberry ringspot virus (strain cherry)
1249
Q6W8W4
495
500
APFHKI
4
WxxL
No
RNA1 polyprotein
Raspberry ringspot virus (strain cherry)
1250
Q6W8W4
538
543
VSFVII
10
WxxL
No
RNA1 polyprotein
Raspberry ringspot virus (strain cherry)
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Ioannis Nezis lab
|
University of Warwick