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LIR-containing proteins in
Secoviridae
>> EXPORT DATA
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S.No.
Uniprot ID
Start
End
LIR sequence
PSSM Score
▲
▼
Pattern
LIR in Anchor
Description
Species
1251
Q6W8W4
600
605
RAFLGV
5
WxxL
No
RNA1 polyprotein
Raspberry ringspot virus (strain cherry)
1252
Q6W8W4
629
634
TSWTGV
13
WxxL
No
RNA1 polyprotein
Raspberry ringspot virus (strain cherry)
1253
Q6W8W4
682
687
CLFEKL
4
WxxL
No
RNA1 polyprotein
Raspberry ringspot virus (strain cherry)
1254
Q6W8W4
689
694
TVYNRV
1
WxxL
No
RNA1 polyprotein
Raspberry ringspot virus (strain cherry)
1255
Q6W8W4
700
705
AFFHEL
3
WxxL
No
RNA1 polyprotein
Raspberry ringspot virus (strain cherry)
1256
Q6W8W4
736
741
VAFATV
2
WxxL
No
RNA1 polyprotein
Raspberry ringspot virus (strain cherry)
1257
Q6W8W4
764
769
MQFGQI
1
WxxL
No
RNA1 polyprotein
Raspberry ringspot virus (strain cherry)
1258
Q6W8W4
797
802
PFWLYI
11
WxxL
No
RNA1 polyprotein
Raspberry ringspot virus (strain cherry)
1259
Q6W8W4
839
844
DKYWSL
8
WxxL
No
RNA1 polyprotein
Raspberry ringspot virus (strain cherry)
1260
Q6W8W4
944
949
AEFCVV
7
WxxL
No
RNA1 polyprotein
Raspberry ringspot virus (strain cherry)
1261
Q6W8W4
1047
1052
FFYSCV
2
WxxL
No
RNA1 polyprotein
Raspberry ringspot virus (strain cherry)
1262
Q6W8W4
1075
1080
LDFEQI
13
WxxL
No
RNA1 polyprotein
Raspberry ringspot virus (strain cherry)
1263
Q6W8W4
1132
1137
IFFKNL
-1
WxxL
No
RNA1 polyprotein
Raspberry ringspot virus (strain cherry)
1264
Q6W8W4
1142
1147
RVYLRL
7
WxxL
No
RNA1 polyprotein
Raspberry ringspot virus (strain cherry)
1265
Q6W8W4
1176
1181
NSYNYV
5
WxxL
No
RNA1 polyprotein
Raspberry ringspot virus (strain cherry)
1266
Q6W8W4
1204
1209
TFFNAL
1
WxxL
No
RNA1 polyprotein
Raspberry ringspot virus (strain cherry)
1267
Q6W8W4
1377
1382
LHFRLV
2
WxxL
No
RNA1 polyprotein
Raspberry ringspot virus (strain cherry)
1268
Q6W8W4
1461
1466
CKFPHI
1
WxxL
No
RNA1 polyprotein
Raspberry ringspot virus (strain cherry)
1269
Q6W8W4
1469
1474
DAFACV
4
WxxL
No
RNA1 polyprotein
Raspberry ringspot virus (strain cherry)
1270
Q6W8W4
1489
1494
LGYSKL
8
WxxL
No
RNA1 polyprotein
Raspberry ringspot virus (strain cherry)
1271
Q6W8W4
1509
1514
TEFVPI
11
WxxL
No
RNA1 polyprotein
Raspberry ringspot virus (strain cherry)
1272
Q6W8W4
1578
1583
QEFHDV
6
WxxL
No
RNA1 polyprotein
Raspberry ringspot virus (strain cherry)
1273
Q6W8W4
1639
1644
FEYPRI
8
WxxL
No
RNA1 polyprotein
Raspberry ringspot virus (strain cherry)
1274
Q6W8W4
1686
1691
IFFDGL
2
WxxL
No
RNA1 polyprotein
Raspberry ringspot virus (strain cherry)
1275
Q6W8W4
1781
1786
PAWYNI
9
WxxL
No
RNA1 polyprotein
Raspberry ringspot virus (strain cherry)
1276
Q6W8W4
1790
1795
QHFVYI
6
WxxL
No
RNA1 polyprotein
Raspberry ringspot virus (strain cherry)
1277
Q6W8W4
1840
1845
SKFDGL
8
WxxL
No
RNA1 polyprotein
Raspberry ringspot virus (strain cherry)
1278
Q6W8W4
1905
1910
VDFNSI
9
WxxL
No
RNA1 polyprotein
Raspberry ringspot virus (strain cherry)
1279
Q6W8W4
1918
1923
CAYRSL
2
WxxL
No
RNA1 polyprotein
Raspberry ringspot virus (strain cherry)
1280
Q6W8W4
2017
2022
SIYSCL
4
WxxL
No
RNA1 polyprotein
Raspberry ringspot virus (strain cherry)
1281
Q6W8W4
2143
2148
CFYVDV
3
WxxL
No
RNA1 polyprotein
Raspberry ringspot virus (strain cherry)
1282
Q6W8W4
2313
2318
PCFITL
7
WxxL
No
RNA1 polyprotein
Raspberry ringspot virus (strain cherry)
1283
P38485
661
666
FEFTKL
12
xLIR
No
RNA2 polyprotein
Andean potato mottle virus
1284
P38485
13
18
SVWGLL
10
WxxL
No
RNA2 polyprotein
Andean potato mottle virus
1285
P38485
129
134
SQFQPI
9
WxxL
No
RNA2 polyprotein
Andean potato mottle virus
1286
P38485
144
149
KSYNYI
7
WxxL
No
RNA2 polyprotein
Andean potato mottle virus
1287
P38485
179
184
SDFALV
11
WxxL
No
RNA2 polyprotein
Andean potato mottle virus
1288
P38485
263
268
ERFRLI
5
WxxL
No
RNA2 polyprotein
Andean potato mottle virus
1289
P38485
322
327
GRYSAV
5
WxxL
No
RNA2 polyprotein
Andean potato mottle virus
1290
P38485
417
422
AQFGRL
3
WxxL
No
RNA2 polyprotein
Andean potato mottle virus
1291
P38485
455
460
VVFDGL
3
WxxL
No
RNA2 polyprotein
Andean potato mottle virus
1292
P38485
503
508
VGYNSV
5
WxxL
No
RNA2 polyprotein
Andean potato mottle virus
1293
P38485
737
742
CPYLYV
3
WxxL
No
RNA2 polyprotein
Andean potato mottle virus
1294
P38485
810
815
SEFCAL
8
WxxL
No
RNA2 polyprotein
Andean potato mottle virus
1295
P38485
846
851
RNWRFV
14
WxxL
No
RNA2 polyprotein
Andean potato mottle virus
1296
Q91HK4
749
754
ADWEFV
22
xLIR
No
RNA2 polyprotein
Arabis mosaic virus (isolate NW)
1297
Q91HK4
75
80
CNWHYV
8
WxxL
Yes
RNA2 polyprotein
Arabis mosaic virus (isolate NW)
1298
Q91HK4
115
120
PYFRPV
2
WxxL
No
RNA2 polyprotein
Arabis mosaic virus (isolate NW)
1299
Q91HK4
149
154
ALFAEL
4
WxxL
No
RNA2 polyprotein
Arabis mosaic virus (isolate NW)
1300
Q91HK4
381
386
ILYNPV
1
WxxL
No
RNA2 polyprotein
Arabis mosaic virus (isolate NW)
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Ioannis Nezis lab
|
University of Warwick