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LIR-containing proteins in
Secoviridae
>> EXPORT DATA
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S.No.
Uniprot ID
Start
End
LIR sequence
PSSM Score
▲
▼
Pattern
LIR in Anchor
Description
Species
1401
P35930
712
717
DDYHLL
15
WxxL
No
RNA1 polyprotein
Red clover mottle virus
1402
Q91HK4
1074
1079
SRWLAI
15
WxxL
No
RNA2 polyprotein
Arabis mosaic virus (isolate NW)
1403
Q8B8X3
1138
1143
SAWVKV
15
WxxL
No
RNA1 polyprotein
Tomato black ring virus (strain MJ)
1404
Q83034
1255
1260
DSYTVL
15
xLIR
Yes
Genome polyprotein
Rice tungro spherical virus (strain A)
1405
Q83034
3425
3430
ADYTSL
15
xLIR
No
Genome polyprotein
Rice tungro spherical virus (strain A)
1406
Q83034
2214
2219
FEWPHL
15
WxxL
No
Genome polyprotein
Rice tungro spherical virus (strain A)
1407
P17768
2
7
DSYVTV
15
xLIR
No
Protein P3
Grapevine fanleaf virus
1408
Q8QVV0
820
825
PTWIYI
16
WxxL
No
RNA1 polyprotein
Cycas necrotic stunt virus
1409
Q6EWG9
1800
1805
NEWSIL
16
WxxL
No
RNA1 polyprotein
Cherry rasp leaf virus (isolate Potato/United States)
1410
A1XIP9
1362
1367
IEWTLL
16
WxxL
No
RNA1 polyprotein
Tomato torrado virus (isolate Solanum lycopersicum/Spain/PRIToTV0301/-)
1411
Q9WAL8
955
960
DNWWTL
16
WxxL
No
RNA1 polyprotein
Satsuma dwarf virus (isolate Satsuma mandarin/Japan/S-58/1977)
1412
Q91PP5
211
216
TEWIPV
16
WxxL
No
Genome polyprotein
Rice tungro spherical virus (strain Vt6)
1413
Q76L40
1724
1729
DDYFTI
16
WxxL
No
RNA1 polyprotein
Broad bean wilt virus 1 (strain Spinach/United States/ATCC PV-132/1963)
1414
P23009
935
940
HSWELI
16
WxxL
No
RNA2 polyprotein
Bean-pod mottle virus (strain Kentucky G7)
1415
Q9YK98
1246
1251
DTWMCL
16
WxxL
No
RNA2 polyprotein
Blackcurrant reversion association virus
1416
Q8V5E0
283
288
LDWWSI
16
WxxL
No
RNA1 polyprotein
Blackcurrant reversion association virus
1417
Q8V5E0
1641
1646
REWGEL
16
WxxL
No
RNA1 polyprotein
Blackcurrant reversion association virus
1418
Q83034
212
217
TEWIPV
16
WxxL
No
Genome polyprotein
Rice tungro spherical virus (strain A)
1419
A1XIP9
769
774
QSWVVV
17
WxxL
No
RNA1 polyprotein
Tomato torrado virus (isolate Solanum lycopersicum/Spain/PRIToTV0301/-)
1420
Q05057
2502
2507
REWSDL
17
WxxL
No
Genome polyprotein
Parsnip yellow fleck virus (isolate P-121)
1421
Q05057
2600
2605
SAWIML
17
WxxL
No
Genome polyprotein
Parsnip yellow fleck virus (isolate P-121)
1422
Q91HK5
866
871
MDWNEL
17
WxxL
No
RNA2 polyprotein
Grapevine fanleaf virus (isolate NW)
1423
P18474
865
870
MDWNEL
17
WxxL
No
RNA2 polyprotein
Grapevine fanleaf virus
1424
P35930
842
847
RMWEGI
17
WxxL
No
RNA1 polyprotein
Red clover mottle virus
1425
Q6EWG9
1706
1711
GDWHIV
18
WxxL
No
RNA1 polyprotein
Cherry rasp leaf virus (isolate Potato/United States)
1426
Q88893
1618
1623
DDFDKL
18
xLIR
No
RNA1 polyprotein
Tobacco ringspot virus (strain Bud Blight)
1427
P14547
1306
1311
ENWIEI
18
WxxL
No
RNA2 polyprotein
Beet ringspot virus
1428
Q9WAL8
1666
1671
ESWDRL
18
WxxL
No
RNA1 polyprotein
Satsuma dwarf virus (isolate Satsuma mandarin/Japan/S-58/1977)
1429
Q6UR06
473
478
ESWDQI
18
WxxL
No
RNA2 polyprotein
Tobacco ringspot virus
1430
Q05057
1943
1948
EDFEMI
18
xLIR
No
Genome polyprotein
Parsnip yellow fleck virus (isolate P-121)
1431
P03600
654
659
EDYDEL
18
xLIR
No
RNA1 polyprotein
Cowpea mosaic virus (strain SB)
1432
P03599
627
632
LDWSIV
18
WxxL
No
RNA2 polyprotein
Cowpea mosaic virus (strain SB)
1433
Q88894
156
161
ADWQCI
19
WxxL
No
Capsid protein
Tobacco ringspot virus
1434
Q6W8W5
1713
1718
REWTDL
19
xLIR
No
RNA1 polyprotein
Arabis mosaic virus (isolate NW)
1435
P14547
264
269
DDWCQL
19
WxxL
No
RNA2 polyprotein
Beet ringspot virus
1436
P29149
1714
1719
REWTDL
19
xLIR
No
RNA1 polyprotein
Grapevine fanleaf virus
1437
Q6EWG8
253
258
ESWEDI
19
xLIR
No
RNA2 polyprotein
Cherry rasp leaf virus (isolate Potato/United States)
1438
Q6W8W3
484
489
DSWSEI
19
WxxL
No
RNA2 polyprotein
Raspberry ringspot virus (strain cherry)
1439
Q6UR06
742
747
ADWQCI
19
WxxL
No
RNA2 polyprotein
Tobacco ringspot virus
1440
P23009
905
910
SDWASL
19
WxxL
No
RNA2 polyprotein
Bean-pod mottle virus (strain Kentucky G7)
1441
P36324
485
490
DSWSEI
19
WxxL
No
RNA2 polyprotein
Raspberry ringspot virus (strain S)
1442
Q9WAL9
1259
1264
EDWFSL
19
WxxL
No
RNA2 polyprotein
Satsuma dwarf virus (isolate Satsuma mandarin/Japan/S-58/1977)
1443
A1XIQ1
342
347
ENWDEL
19
WxxL
No
RNA2 polyprotein
Tomato torrado virus (isolate Solanum lycopersicum/Spain/PRIToTV0301/-)
1444
Q9YJU5
1728
1733
DSWLPI
20
xLIR
No
RNA1 polyprotein
Bean-pod mottle virus (strain Kentucky G7)
1445
Q91HK5
750
755
ADWQAV
20
xLIR
No
RNA2 polyprotein
Grapevine fanleaf virus (isolate NW)
1446
Q9YK98
980
985
DNWDAI
20
WxxL
No
RNA2 polyprotein
Blackcurrant reversion association virus
1447
P18474
749
754
ADWQAV
20
xLIR
No
RNA2 polyprotein
Grapevine fanleaf virus
1448
Q6W8W4
1817
1822
REWDDL
20
xLIR
No
RNA1 polyprotein
Raspberry ringspot virus (strain cherry)
1449
P29150
354
359
GDWEHV
21
xLIR
No
RNA1 polyprotein
Tomato ringspot virus (isolate raspberry)
1450
Q65030
770
775
ADWEFV
22
xLIR
No
RNA2 polyprotein
Arabis mosaic virus (isolate Syrah)
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Ioannis Nezis lab
|
University of Warwick