LIR-containing proteins in  Secoviridae   >> EXPORT DATA


S.No. Uniprot ID Start End LIR sequence PSSM Score    Pattern LIR in Anchor Description Species
1401P35930 712 717 DDYHLL 15 WxxL No RNA1 polyprotein Red clover mottle virus
1402Q91HK4 1074 1079 SRWLAI 15 WxxL No RNA2 polyprotein Arabis mosaic virus (isolate NW)
1403Q8B8X3 1138 1143 SAWVKV 15 WxxL No RNA1 polyprotein Tomato black ring virus (strain MJ)
1404Q83034 1255 1260 DSYTVL 15 xLIR Yes Genome polyprotein Rice tungro spherical virus (strain A)
1405Q83034 3425 3430 ADYTSL 15 xLIR No Genome polyprotein Rice tungro spherical virus (strain A)
1406Q83034 2214 2219 FEWPHL 15 WxxL No Genome polyprotein Rice tungro spherical virus (strain A)
1407P17768 2 7 DSYVTV 15 xLIR No Protein P3 Grapevine fanleaf virus
1408Q8QVV0 820 825 PTWIYI 16 WxxL No RNA1 polyprotein Cycas necrotic stunt virus
1409Q6EWG9 1800 1805 NEWSIL 16 WxxL No RNA1 polyprotein Cherry rasp leaf virus (isolate Potato/United States)
1410A1XIP9 1362 1367 IEWTLL 16 WxxL No RNA1 polyprotein Tomato torrado virus (isolate Solanum lycopersicum/Spain/PRIToTV0301/-)
1411Q9WAL8 955 960 DNWWTL 16 WxxL No RNA1 polyprotein Satsuma dwarf virus (isolate Satsuma mandarin/Japan/S-58/1977)
1412Q91PP5 211 216 TEWIPV 16 WxxL No Genome polyprotein Rice tungro spherical virus (strain Vt6)
1413Q76L40 1724 1729 DDYFTI 16 WxxL No RNA1 polyprotein Broad bean wilt virus 1 (strain Spinach/United States/ATCC PV-132/1963)
1414P23009 935 940 HSWELI 16 WxxL No RNA2 polyprotein Bean-pod mottle virus (strain Kentucky G7)
1415Q9YK98 1246 1251 DTWMCL 16 WxxL No RNA2 polyprotein Blackcurrant reversion association virus
1416Q8V5E0 283 288 LDWWSI 16 WxxL No RNA1 polyprotein Blackcurrant reversion association virus
1417Q8V5E0 1641 1646 REWGEL 16 WxxL No RNA1 polyprotein Blackcurrant reversion association virus
1418Q83034 212 217 TEWIPV 16 WxxL No Genome polyprotein Rice tungro spherical virus (strain A)
1419A1XIP9 769 774 QSWVVV 17 WxxL No RNA1 polyprotein Tomato torrado virus (isolate Solanum lycopersicum/Spain/PRIToTV0301/-)
1420Q05057 2502 2507 REWSDL 17 WxxL No Genome polyprotein Parsnip yellow fleck virus (isolate P-121)
1421Q05057 2600 2605 SAWIML 17 WxxL No Genome polyprotein Parsnip yellow fleck virus (isolate P-121)
1422Q91HK5 866 871 MDWNEL 17 WxxL No RNA2 polyprotein Grapevine fanleaf virus (isolate NW)
1423P18474 865 870 MDWNEL 17 WxxL No RNA2 polyprotein Grapevine fanleaf virus
1424P35930 842 847 RMWEGI 17 WxxL No RNA1 polyprotein Red clover mottle virus
1425Q6EWG9 1706 1711 GDWHIV 18 WxxL No RNA1 polyprotein Cherry rasp leaf virus (isolate Potato/United States)
1426Q88893 1618 1623 DDFDKL 18 xLIR No RNA1 polyprotein Tobacco ringspot virus (strain Bud Blight)
1427P14547 1306 1311 ENWIEI 18 WxxL No RNA2 polyprotein Beet ringspot virus
1428Q9WAL8 1666 1671 ESWDRL 18 WxxL No RNA1 polyprotein Satsuma dwarf virus (isolate Satsuma mandarin/Japan/S-58/1977)
1429Q6UR06 473 478 ESWDQI 18 WxxL No RNA2 polyprotein Tobacco ringspot virus
1430Q05057 1943 1948 EDFEMI 18 xLIR No Genome polyprotein Parsnip yellow fleck virus (isolate P-121)
1431P03600 654 659 EDYDEL 18 xLIR No RNA1 polyprotein Cowpea mosaic virus (strain SB)
1432P03599 627 632 LDWSIV 18 WxxL No RNA2 polyprotein Cowpea mosaic virus (strain SB)
1433Q88894 156 161 ADWQCI 19 WxxL No Capsid protein Tobacco ringspot virus
1434Q6W8W5 1713 1718 REWTDL 19 xLIR No RNA1 polyprotein Arabis mosaic virus (isolate NW)
1435P14547 264 269 DDWCQL 19 WxxL No RNA2 polyprotein Beet ringspot virus
1436P29149 1714 1719 REWTDL 19 xLIR No RNA1 polyprotein Grapevine fanleaf virus
1437Q6EWG8 253 258 ESWEDI 19 xLIR No RNA2 polyprotein Cherry rasp leaf virus (isolate Potato/United States)
1438Q6W8W3 484 489 DSWSEI 19 WxxL No RNA2 polyprotein Raspberry ringspot virus (strain cherry)
1439Q6UR06 742 747 ADWQCI 19 WxxL No RNA2 polyprotein Tobacco ringspot virus
1440P23009 905 910 SDWASL 19 WxxL No RNA2 polyprotein Bean-pod mottle virus (strain Kentucky G7)
1441P36324 485 490 DSWSEI 19 WxxL No RNA2 polyprotein Raspberry ringspot virus (strain S)
1442Q9WAL9 1259 1264 EDWFSL 19 WxxL No RNA2 polyprotein Satsuma dwarf virus (isolate Satsuma mandarin/Japan/S-58/1977)
1443A1XIQ1 342 347 ENWDEL 19 WxxL No RNA2 polyprotein Tomato torrado virus (isolate Solanum lycopersicum/Spain/PRIToTV0301/-)
1444Q9YJU5 1728 1733 DSWLPI 20 xLIR No RNA1 polyprotein Bean-pod mottle virus (strain Kentucky G7)
1445Q91HK5 750 755 ADWQAV 20 xLIR No RNA2 polyprotein Grapevine fanleaf virus (isolate NW)
1446Q9YK98 980 985 DNWDAI 20 WxxL No RNA2 polyprotein Blackcurrant reversion association virus
1447P18474 749 754 ADWQAV 20 xLIR No RNA2 polyprotein Grapevine fanleaf virus
1448Q6W8W4 1817 1822 REWDDL 20 xLIR No RNA1 polyprotein Raspberry ringspot virus (strain cherry)
1449P29150 354 359 GDWEHV 21 xLIR No RNA1 polyprotein Tomato ringspot virus (isolate raspberry)
1450Q65030 770 775 ADWEFV 22 xLIR No RNA2 polyprotein Arabis mosaic virus (isolate Syrah)









Copyright © Ioannis Nezis lab | University of Warwick