iLIR
@Viral
Home
Classification
ICTV
Caudovirales
Myoviridae
Podoviridae
Siphoviridae
Herpesvirales
Alloherpesviridae
Herpesviridae
Malacoherpesviridae
Ligamenvirales
Lipothrixviridae
Rudiviridae
Mononegavirales
Bornaviridae
Filoviridae
Mymonaviridae
Nyamiviridae
Paramyxoviridae
Pneumoviridae
Rhabdoviridae
Sunviridae
Unassigned
Nidovirales
Arteriviridae
Coronaviridae
Mesoniviridae
Roniviridae
Picornavirales
Dicistroviridae
Iflaviridae
Marnaviridae
Picornaviridae
Secoviridae
Unassigned
Tymovirales
Alphaflexiviridae
Betaflexiviridae
Gammaflexiviridae
Tymoviridae
Unassigned order
Baltimore system
dsDNA
Caudovirales
Myoviridae
Podoviridae
Siphoviridae
Herpesvirales
Alloherpesviridae
Herpesviridae
Malacoherpesviridae
Ligamenvirales
Lipothrixviridae
Rudiviridae
Unassigned order
dsRNA
Unassigned order
Amalgaviridae
Birnaviridae
Chrysoviridae
Cystoviridae
Endornaviridae
Hypoviridae
Megabirnaviridae
Partitiviridae
Picobirnaviridae
Quadriviridae
Reoviridae
Totiviridae
ssDNA
Unassigned order
Anelloviridae
Bidnaviridae
Circoviridae
Geminiviridae
Inoviridae
Nanoviridae
Microviridae
Mycodnaviridae
Parvoviridae
Pleolipoviridae
Spiraviridae
ssRNA (+)
Tymovirales
Alphaflexiviridae
Betaflexiviridae
Gammaflexiviridae
Tymoviridae
Picornavirales
Dicistroviridae
Picornaviridae
Secoviridae
Nidovirales
Arteriviridae
Coronaviridae
Mesoniviridae
Roniviridae
ssRNA (-)
Mononegavirales
Bornaviridae
Rhadbdoviridae
Filoviridae
Nyamaviridae
Paramyxoviridae
Unassigned order
Arenaviridae
Bunyaviridae
Ophioviridae
Orthomyxoviridae
ssRNA-RT
Retroviridae
dsDNA-RT
Caulimoviridae
Hepadnaviridae
Search
BLAST
ICTV
Baltimore system
Bibliography
Help
Links
iLIR Database
LIR Motif Search
LIR-containing proteins in
Alphaflexiviridae
>> EXPORT DATA
<< prev
1
2
3
4
5
6
7
...
13
14
next >>
S.No.
Uniprot ID
Start
End
LIR sequence
PSSM Score
▲
▼
Pattern
LIR in Anchor
Description
Species
51
P28899
44
49
DPFRVL
8
WxxL
Yes
Coat protein
Strawberry mild yellow edge-associated virus
52
P28899
155
160
GNWSNL
12
WxxL
No
Coat protein
Strawberry mild yellow edge-associated virus
53
P28899
172
177
DFFDGV
6
WxxL
Yes
Coat protein
Strawberry mild yellow edge-associated virus
54
P16486
40
45
KDWKTL
20
WxxL
No
Coat protein
Clover yellow mosaic virus
55
P16486
103
108
RYFAKV
3
WxxL
No
Coat protein
Clover yellow mosaic virus
56
P16486
138
143
DFFEGV
6
WxxL
Yes
Coat protein
Clover yellow mosaic virus
57
P15100
53
58
DLFKKL
7
WxxL
Yes
Coat protein
Narcissus mosaic virus
58
P15100
74
79
RAYADV
5
WxxL
No
Coat protein
Narcissus mosaic virus
59
P15100
104
109
RQFYVI
7
WxxL
No
Coat protein
Narcissus mosaic virus
60
P15100
118
123
MYFAKV
0
WxxL
No
Coat protein
Narcissus mosaic virus
61
P15100
153
158
DFFEGV
6
WxxL
No
Coat protein
Narcissus mosaic virus
62
P15100
185
190
AKYGAL
5
WxxL
No
Coat protein
Narcissus mosaic virus
63
P62406
78
83
AAWDLV
14
WxxL
No
Coat protein
Potato virus X (strain CP)
64
P62406
127
132
KKYAPV
5
WxxL
No
Coat protein
Potato virus X (strain CP)
65
P62406
162
167
DFFDGV
6
WxxL
Yes
Coat protein
Potato virus X (strain CP)
66
P62406
194
199
AAFVKI
8
WxxL
Yes
Coat protein
Potato virus X (strain CP)
67
P62406
207
212
NDFASL
10
WxxL
No
Coat protein
Potato virus X (strain CP)
68
Q04572
124
129
SRFVNL
7
WxxL
No
Capsid protein
Shallot virus X
69
Q04572
192
197
DFFNAV
4
WxxL
Yes
Capsid protein
Shallot virus X
70
P07699
79
84
AAWDLV
14
WxxL
No
Coat protein
Potato virus X
71
P07699
128
133
MKYAPV
3
WxxL
No
Coat protein
Potato virus X
72
P07699
163
168
DFFNGV
2
WxxL
Yes
Coat protein
Potato virus X
73
P07699
195
200
AAFVKI
8
WxxL
Yes
Coat protein
Potato virus X
74
P07699
208
213
NDFASL
10
WxxL
No
Coat protein
Potato virus X
75
P31798
79
84
AAWDLV
14
WxxL
No
Coat protein
Potato virus X (strain UK3)
76
P31798
128
133
MKYAPV
3
WxxL
No
Coat protein
Potato virus X (strain UK3)
77
P31798
163
168
DFFNGV
2
WxxL
Yes
Coat protein
Potato virus X (strain UK3)
78
P31798
195
200
AAFVKI
8
WxxL
Yes
Coat protein
Potato virus X (strain UK3)
79
P31798
208
213
NDFASL
10
WxxL
No
Coat protein
Potato virus X (strain UK3)
80
Q9QEE7
134
139
LKYSPV
5
WxxL
Yes
Capsid protein
Indian citrus ringspot virus (isolate Kinnow mandarin/India/K1/1996)
81
Q9QEE7
154
159
KAWVRI
14
WxxL
No
Capsid protein
Indian citrus ringspot virus (isolate Kinnow mandarin/India/K1/1996)
82
Q9QEE7
210
215
RDFCPL
11
WxxL
No
Capsid protein
Indian citrus ringspot virus (isolate Kinnow mandarin/India/K1/1996)
83
Q9QEE7
220
225
AYYSRV
3
WxxL
No
Capsid protein
Indian citrus ringspot virus (isolate Kinnow mandarin/India/K1/1996)
84
Q9QEE7
255
260
DFFHGV
2
WxxL
No
Capsid protein
Indian citrus ringspot virus (isolate Kinnow mandarin/India/K1/1996)
85
Q9QEE7
265
270
SLYVPL
9
WxxL
No
Capsid protein
Indian citrus ringspot virus (isolate Kinnow mandarin/India/K1/1996)
86
P15406
60
65
RAFADV
4
WxxL
No
Coat protein
White clover mosaic virus (strain O)
87
P15406
103
108
MYFANV
-2
WxxL
No
Coat protein
White clover mosaic virus (strain O)
88
P15406
121
126
ASWSKL
15
WxxL
No
Coat protein
White clover mosaic virus (strain O)
89
P15406
138
143
DFFDGV
6
WxxL
No
Coat protein
White clover mosaic virus (strain O)
90
Q04583
54
59
GGFTTI
11
xLIR
No
Uncharacterized ORF4 protein
Shallot virus X
91
Q04583
337
342
DGYILL
14
xLIR
No
Uncharacterized ORF4 protein
Shallot virus X
92
Q04583
75
80
RNFNTL
8
WxxL
No
Uncharacterized ORF4 protein
Shallot virus X
93
Q04583
111
116
TFFSNL
0
WxxL
Yes
Uncharacterized ORF4 protein
Shallot virus X
94
Q04583
146
151
ESFGQL
6
WxxL
Yes
Uncharacterized ORF4 protein
Shallot virus X
95
Q04583
276
281
PPYQAV
7
WxxL
No
Uncharacterized ORF4 protein
Shallot virus X
96
Q04583
288
293
RTYGNI
6
WxxL
Yes
Uncharacterized ORF4 protein
Shallot virus X
97
Q04583
330
335
VNFTLL
7
WxxL
No
Uncharacterized ORF4 protein
Shallot virus X
98
K9N643
164
169
KDWLLV
20
xLIR
No
Non-structural protein ORF4b
Human coronavirus EMC (isolate United Kingdom/H123990006/2012)
99
K9N643
37
42
RRFSLL
6
WxxL
No
Non-structural protein ORF4b
Human coronavirus EMC (isolate United Kingdom/H123990006/2012)
100
K9N643
54
59
THYVRV
6
WxxL
No
Non-structural protein ORF4b
Human coronavirus EMC (isolate United Kingdom/H123990006/2012)
Copyright ©
Ioannis Nezis lab
|
University of Warwick