LIR-containing proteins in  Alphaflexiviridae   >> EXPORT DATA


S.No. Uniprot ID Start End LIR sequence PSSM Score ▲  ▼ Pattern LIR in Anchor Description Species
1Q918W0 4 9 IDWVIL 21 WxxL No Movement protein TGBp3 Indian citrus ringspot virus (isolate Kinnow mandarin/India/K1/1996)
2P16486 40 45 KDWKTL 20 WxxL No Coat protein Clover yellow mosaic virus
3K9N643 164 169 KDWLLV 20 xLIR No Non-structural protein ORF4b Human coronavirus EMC (isolate United Kingdom/H123990006/2012)
4Q07518 392 397 LDWQPI 20 xLIR No RNA replication protein Plantago asiatica mosaic potexvirus
5Q04575 895 900 SSWVAL 19 xLIR No RNA replication protein Shallot virus X
6Q918W3 398 403 LEWETL 19 xLIR No RNA replication protein Indian citrus ringspot virus (isolate Kinnow mandarin/India/K1/1996)
7P22168 1018 1023 FDWNKL 19 WxxL No RNA replication protein Foxtail mosaic virus
8Q04575 548 553 DDFDDL 18 xLIR Yes RNA replication protein Shallot virus X
9P15095 935 940 DDYTKL 18 xLIR No RNA replication protein Narcissus mosaic virus
10P22168 668 673 DDYTKL 18 xLIR No RNA replication protein Foxtail mosaic virus
11Q6YI57 939 944 AGWIEL 18 xLIR No RNA replication protein Sclerotinia sclerotiorum debilitation-associated virus (isolate Sclerotinia/China/Xie/-)
12Q07517 91 96 GSWDVV 18 xLIR No Movement and silencing protein TGBp1 Plantago asiatica mosaic potexvirus
13P20951 400 405 LEWVDV 17 xLIR No RNA replication protein Papaya mosaic potexvirus
14P15402 134 139 ESWTRI 17 WxxL No RNA replication protein White clover mosaic virus (strain O)
15P15095 449 454 LSWEDL 17 xLIR No RNA replication protein Narcissus mosaic virus
16Q07518 221 226 LEWLTV 17 xLIR No RNA replication protein Plantago asiatica mosaic potexvirus
17P22591 401 406 EDYVKL 17 xLIR No RNA replication protein Potato virus X (strain CP)
18P28897 767 772 DGWPVL 17 WxxL No RNA replication protein Strawberry mild yellow edge-associated virus
19B1PS76 419 424 DDFQKL 17 xLIR No RNA-directed RNA polymerase Lolium latent virus (isolate Lolium/USA/US1/-)
20B1PS76 305 310 GKWVTL 17 WxxL No RNA-directed RNA polymerase Lolium latent virus (isolate Lolium/USA/US1/-)
21Q6YI57 699 704 DDFIDI 17 xLIR No RNA replication protein Sclerotinia sclerotiorum debilitation-associated virus (isolate Sclerotinia/China/Xie/-)
22Q6YI57 459 464 SNWLAI 17 WxxL No RNA replication protein Sclerotinia sclerotiorum debilitation-associated virus (isolate Sclerotinia/China/Xie/-)
23P09498 134 139 ESWTRI 17 WxxL No RNA replication protein White clover mosaic virus (strain M)
24P20951 224 229 LEWIKV 16 xLIR No RNA replication protein Papaya mosaic potexvirus
25P17779 801 806 DDYSKL 16 WxxL No RNA replication protein Potato virus X (strain X3)
26P15402 221 226 LEWLKV 16 xLIR No RNA replication protein White clover mosaic virus (strain O)
27P15402 637 642 DDYSKL 16 WxxL No RNA replication protein White clover mosaic virus (strain O)
28P15402 806 811 DFWEKL 16 WxxL No RNA replication protein White clover mosaic virus (strain O)
29Q918W3 221 226 LEWLDV 16 xLIR No RNA replication protein Indian citrus ringspot virus (isolate Kinnow mandarin/India/K1/1996)
30Q918W3 1004 1009 DDYSKL 16 WxxL No RNA replication protein Indian citrus ringspot virus (isolate Kinnow mandarin/India/K1/1996)
31P15095 221 226 LEWLKV 16 xLIR No RNA replication protein Narcissus mosaic virus
32P15095 755 760 ASWVNL 16 WxxL Yes RNA replication protein Narcissus mosaic virus
33P09395 801 806 DDYSKL 16 WxxL No RNA replication protein Potato virus X
34P22591 801 806 DDYSKL 16 WxxL No RNA replication protein Potato virus X (strain CP)
35B1PS76 428 433 LEWQPV 16 xLIR No RNA-directed RNA polymerase Lolium latent virus (isolate Lolium/USA/US1/-)
36B1PS76 532 537 RDYLPI 16 xLIR Yes RNA-directed RNA polymerase Lolium latent virus (isolate Lolium/USA/US1/-)
37Q07630 801 806 DDYSKL 16 WxxL No RNA replication protein Potato virus X (strain HB)
38Q6YI57 690 695 FDYELV 16 xLIR No RNA replication protein Sclerotinia sclerotiorum debilitation-associated virus (isolate Sclerotinia/China/Xie/-)
39Q6YI57 629 634 LEWKVI 16 WxxL No RNA replication protein Sclerotinia sclerotiorum debilitation-associated virus (isolate Sclerotinia/China/Xie/-)
40P09498 221 226 LEWLKV 16 xLIR No RNA replication protein White clover mosaic virus (strain M)
41P09498 637 642 DDYSKL 16 WxxL No RNA replication protein White clover mosaic virus (strain M)
42P09498 806 811 DFWEKL 16 WxxL No RNA replication protein White clover mosaic virus (strain M)
43Q6YNQ5 168 173 GDYTPL 15 xLIR No Capsid protein Botrytis virus X (isolate Botrytis cinerea/New Zealand/Howitt/2006)
44P09502 121 126 ASWSKL 15 WxxL No Coat protein White clover mosaic virus (strain M)
45P15406 121 126 ASWSKL 15 WxxL No Coat protein White clover mosaic virus (strain O)
46Q04575 451 456 MTWTLL 15 WxxL Yes RNA replication protein Shallot virus X
47Q918W3 632 637 GDFIVL 15 xLIR Yes RNA replication protein Indian citrus ringspot virus (isolate Kinnow mandarin/India/K1/1996)
48Q918W3 1099 1104 SGWPTL 15 WxxL No RNA replication protein Indian citrus ringspot virus (isolate Kinnow mandarin/India/K1/1996)
49Q07518 997 1002 LLWEMI 15 WxxL Yes RNA replication protein Plantago asiatica mosaic potexvirus
50P22591 410 415 VDWRPV 15 WxxL No RNA replication protein Potato virus X (strain CP)








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