iLIR
@Viral
Home
Classification
ICTV
Caudovirales
Myoviridae
Podoviridae
Siphoviridae
Herpesvirales
Alloherpesviridae
Herpesviridae
Malacoherpesviridae
Ligamenvirales
Lipothrixviridae
Rudiviridae
Mononegavirales
Bornaviridae
Filoviridae
Mymonaviridae
Nyamiviridae
Paramyxoviridae
Pneumoviridae
Rhabdoviridae
Sunviridae
Unassigned
Nidovirales
Arteriviridae
Coronaviridae
Mesoniviridae
Roniviridae
Picornavirales
Dicistroviridae
Iflaviridae
Marnaviridae
Picornaviridae
Secoviridae
Unassigned
Tymovirales
Alphaflexiviridae
Betaflexiviridae
Gammaflexiviridae
Tymoviridae
Unassigned order
Baltimore system
dsDNA
Caudovirales
Myoviridae
Podoviridae
Siphoviridae
Herpesvirales
Alloherpesviridae
Herpesviridae
Malacoherpesviridae
Ligamenvirales
Lipothrixviridae
Rudiviridae
Unassigned order
dsRNA
Unassigned order
Amalgaviridae
Birnaviridae
Chrysoviridae
Cystoviridae
Endornaviridae
Hypoviridae
Megabirnaviridae
Partitiviridae
Picobirnaviridae
Quadriviridae
Reoviridae
Totiviridae
ssDNA
Unassigned order
Anelloviridae
Bidnaviridae
Circoviridae
Geminiviridae
Inoviridae
Nanoviridae
Microviridae
Mycodnaviridae
Parvoviridae
Pleolipoviridae
Spiraviridae
ssRNA (+)
Tymovirales
Alphaflexiviridae
Betaflexiviridae
Gammaflexiviridae
Tymoviridae
Picornavirales
Dicistroviridae
Picornaviridae
Secoviridae
Nidovirales
Arteriviridae
Coronaviridae
Mesoniviridae
Roniviridae
ssRNA (-)
Mononegavirales
Bornaviridae
Rhadbdoviridae
Filoviridae
Nyamaviridae
Paramyxoviridae
Unassigned order
Arenaviridae
Bunyaviridae
Ophioviridae
Orthomyxoviridae
ssRNA-RT
Retroviridae
dsDNA-RT
Caulimoviridae
Hepadnaviridae
Search
BLAST
ICTV
Baltimore system
Bibliography
Help
Links
iLIR Database
LIR Motif Search
LIR-containing proteins in
Alphaflexiviridae
>> EXPORT DATA
<< prev
1
2
...
6
7
8
9
10
...
13
14
next >>
S.No.
Uniprot ID
Start
End
LIR sequence
PSSM Score
▲
▼
Pattern
LIR in Anchor
Description
Species
351
P22591
948
953
VMYSAL
7
WxxL
No
RNA replication protein
Potato virus X (strain CP)
352
P22591
971
976
AFWEKL
13
WxxL
No
RNA replication protein
Potato virus X (strain CP)
353
P22591
1069
1074
LLWATI
10
WxxL
No
RNA replication protein
Potato virus X (strain CP)
354
P22591
1255
1260
LQFEVL
9
WxxL
No
RNA replication protein
Potato virus X (strain CP)
355
P22591
1273
1278
QAYIDI
7
WxxL
No
RNA replication protein
Potato virus X (strain CP)
356
P22591
1341
1346
QSFHRL
5
WxxL
No
RNA replication protein
Potato virus X (strain CP)
357
P28897
853
858
KTFLEL
11
xLIR
No
RNA replication protein
Strawberry mild yellow edge-associated virus
358
P28897
7
12
SVFSSL
5
WxxL
No
RNA replication protein
Strawberry mild yellow edge-associated virus
359
P28897
24
29
EAYKRI
6
WxxL
No
RNA replication protein
Strawberry mild yellow edge-associated virus
360
P28897
92
97
VTFLFL
9
WxxL
No
RNA replication protein
Strawberry mild yellow edge-associated virus
361
P28897
165
170
NVFLDV
4
WxxL
No
RNA replication protein
Strawberry mild yellow edge-associated virus
362
P28897
200
205
GGFQYL
9
WxxL
No
RNA replication protein
Strawberry mild yellow edge-associated virus
363
P28897
216
221
HEFEDL
10
WxxL
No
RNA replication protein
Strawberry mild yellow edge-associated virus
364
P28897
229
234
FIYRWV
1
WxxL
No
RNA replication protein
Strawberry mild yellow edge-associated virus
365
P28897
289
294
VTFPDL
4
WxxL
No
RNA replication protein
Strawberry mild yellow edge-associated virus
366
P28897
313
318
KLFLYV
4
WxxL
No
RNA replication protein
Strawberry mild yellow edge-associated virus
367
P28897
354
359
VNYFMV
6
WxxL
No
RNA replication protein
Strawberry mild yellow edge-associated virus
368
P28897
367
372
NDYSML
14
WxxL
No
RNA replication protein
Strawberry mild yellow edge-associated virus
369
P28897
376
381
SVWTQL
13
WxxL
No
RNA replication protein
Strawberry mild yellow edge-associated virus
370
P28897
494
499
AAWDTV
15
WxxL
Yes
RNA replication protein
Strawberry mild yellow edge-associated virus
371
P28897
672
677
DDYGKL
14
WxxL
No
RNA replication protein
Strawberry mild yellow edge-associated virus
372
P28897
687
692
ANYPNI
4
WxxL
No
RNA replication protein
Strawberry mild yellow edge-associated virus
373
P28897
767
772
DGWPVL
17
WxxL
No
RNA replication protein
Strawberry mild yellow edge-associated virus
374
P28897
818
823
VMYTAL
9
WxxL
No
RNA replication protein
Strawberry mild yellow edge-associated virus
375
P28897
841
846
DFWTKL
15
WxxL
No
RNA replication protein
Strawberry mild yellow edge-associated virus
376
P28897
938
943
LMWATI
14
WxxL
No
RNA replication protein
Strawberry mild yellow edge-associated virus
377
P28897
1100
1105
WNFEGL
5
WxxL
No
RNA replication protein
Strawberry mild yellow edge-associated virus
378
P28897
1123
1128
LQFEVI
9
WxxL
No
RNA replication protein
Strawberry mild yellow edge-associated virus
379
P28897
1130
1135
AKFHNI
3
WxxL
No
RNA replication protein
Strawberry mild yellow edge-associated virus
380
P28897
1141
1146
NSYVEL
12
WxxL
No
RNA replication protein
Strawberry mild yellow edge-associated virus
381
P28897
1151
1156
KVFLGV
3
WxxL
No
RNA replication protein
Strawberry mild yellow edge-associated virus
382
P28897
1209
1214
PSFNKI
7
WxxL
No
RNA replication protein
Strawberry mild yellow edge-associated virus
383
P28897
1253
1258
KLYASL
4
WxxL
No
RNA replication protein
Strawberry mild yellow edge-associated virus
384
B1PS76
142
147
ASFLEV
10
xLIR
No
RNA-directed RNA polymerase
Lolium latent virus (isolate Lolium/USA/US1/-)
385
B1PS76
419
424
DDFQKL
17
xLIR
No
RNA-directed RNA polymerase
Lolium latent virus (isolate Lolium/USA/US1/-)
386
B1PS76
428
433
LEWQPV
16
xLIR
No
RNA-directed RNA polymerase
Lolium latent virus (isolate Lolium/USA/US1/-)
387
B1PS76
504
509
EVFDAI
8
xLIR
Yes
RNA-directed RNA polymerase
Lolium latent virus (isolate Lolium/USA/US1/-)
388
B1PS76
532
537
RDYLPI
16
xLIR
Yes
RNA-directed RNA polymerase
Lolium latent virus (isolate Lolium/USA/US1/-)
389
B1PS76
1529
1534
EEYLFL
14
xLIR
No
RNA-directed RNA polymerase
Lolium latent virus (isolate Lolium/USA/US1/-)
390
B1PS76
1542
1547
KGYLTI
12
xLIR
No
RNA-directed RNA polymerase
Lolium latent virus (isolate Lolium/USA/US1/-)
391
B1PS76
195
200
SLYPDL
4
WxxL
No
RNA-directed RNA polymerase
Lolium latent virus (isolate Lolium/USA/US1/-)
392
B1PS76
258
263
EAYTRV
7
WxxL
No
RNA-directed RNA polymerase
Lolium latent virus (isolate Lolium/USA/US1/-)
393
B1PS76
305
310
GKWVTL
17
WxxL
No
RNA-directed RNA polymerase
Lolium latent virus (isolate Lolium/USA/US1/-)
394
B1PS76
312
317
RIFRPV
3
WxxL
No
RNA-directed RNA polymerase
Lolium latent virus (isolate Lolium/USA/US1/-)
395
B1PS76
399
404
WIFTPI
3
WxxL
No
RNA-directed RNA polymerase
Lolium latent virus (isolate Lolium/USA/US1/-)
396
B1PS76
692
697
TAYTDV
6
WxxL
No
RNA-directed RNA polymerase
Lolium latent virus (isolate Lolium/USA/US1/-)
397
B1PS76
723
728
QSWLPV
15
WxxL
No
RNA-directed RNA polymerase
Lolium latent virus (isolate Lolium/USA/US1/-)
398
B1PS76
881
886
LGFTGL
7
WxxL
Yes
RNA-directed RNA polymerase
Lolium latent virus (isolate Lolium/USA/US1/-)
399
B1PS76
962
967
LTWKTL
15
WxxL
No
RNA-directed RNA polymerase
Lolium latent virus (isolate Lolium/USA/US1/-)
400
B1PS76
1050
1055
DDYGKL
14
WxxL
No
RNA-directed RNA polymerase
Lolium latent virus (isolate Lolium/USA/US1/-)
Copyright ©
Ioannis Nezis lab
|
University of Warwick