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LIR-containing proteins in
Alphaflexiviridae
>> EXPORT DATA
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S.No.
Uniprot ID
Start
End
LIR sequence
PSSM Score
▲
▼
Pattern
LIR in Anchor
Description
Species
201
P0C787
23
28
LSFALV
5
WxxL
No
Movement protein TGB2
Potato virus X
202
P0C786
23
28
LSFALV
5
WxxL
No
Movement protein TGB2
Potato virus X (strain X3)
203
P09500
79
84
TIFLLI
5
WxxL
No
Movement protein TGB2
White clover mosaic virus (strain M)
204
Q00478
49
54
EPFCTI
5
WxxL
No
Movement protein TGBp3
Cymbidium mosaic virus (strain Singapore)
205
B1PS77
98
103
PPFNVL
5
WxxL
No
Movement and silencing protein TGBp1
Lolium latent virus (isolate Lolium/USA/US1/-)
206
Q04581
96
101
KPFNVL
5
WxxL
No
Movement and silencing protein TGBp1
Shallot virus X
207
B1PS79
64
69
SPFNPL
5
WxxL
No
Movement protein TGBp3
Lolium latent virus (isolate Lolium/USA/US1/-)
208
Q07520
43
48
SFYYFL
5
WxxL
No
Movement protein TGBp3
Plantago asiatica mosaic potexvirus
209
P27334
133
138
DFFDGV
6
WxxL
No
Coat protein
Lily virus X
210
P09502
138
143
DFFDGV
6
WxxL
No
Coat protein
White clover mosaic virus (strain M)
211
P37993
236
241
GGYNNL
6
WxxL
No
Coat protein
Potato aucuba mosaic virus
212
P16596
142
147
DFFDGV
6
WxxL
Yes
Coat protein
Papaya mosaic potexvirus
213
Q07626
127
132
RKYAPV
6
WxxL
No
Coat protein
Potato virus X (strain HB)
214
Q07626
162
167
DFFDGV
6
WxxL
Yes
Coat protein
Potato virus X (strain HB)
215
P10468
162
167
DFFDGV
6
WxxL
Yes
Coat protein
Potato virus X (strain Xc)
216
P28899
172
177
DFFDGV
6
WxxL
Yes
Coat protein
Strawberry mild yellow edge-associated virus
217
P16486
138
143
DFFEGV
6
WxxL
Yes
Coat protein
Clover yellow mosaic virus
218
P15100
153
158
DFFEGV
6
WxxL
No
Coat protein
Narcissus mosaic virus
219
P62406
162
167
DFFDGV
6
WxxL
Yes
Coat protein
Potato virus X (strain CP)
220
P15406
138
143
DFFDGV
6
WxxL
No
Coat protein
White clover mosaic virus (strain O)
221
Q04583
146
151
ESFGQL
6
WxxL
Yes
Uncharacterized ORF4 protein
Shallot virus X
222
Q04583
288
293
RTYGNI
6
WxxL
Yes
Uncharacterized ORF4 protein
Shallot virus X
223
K9N643
37
42
RRFSLL
6
WxxL
No
Non-structural protein ORF4b
Human coronavirus EMC (isolate United Kingdom/H123990006/2012)
224
K9N643
54
59
THYVRV
6
WxxL
No
Non-structural protein ORF4b
Human coronavirus EMC (isolate United Kingdom/H123990006/2012)
225
K9N643
126
131
HEFALL
6
WxxL
No
Non-structural protein ORF4b
Human coronavirus EMC (isolate United Kingdom/H123990006/2012)
226
K9N643
236
241
HSYPIL
6
WxxL
No
Non-structural protein ORF4b
Human coronavirus EMC (isolate United Kingdom/H123990006/2012)
227
Q6YNQ6
41
46
IGFSLI
6
WxxL
No
Uncharacterized ORF2 protein
Botrytis virus X (isolate Botrytis cinerea/New Zealand/Howitt/2006)
228
P20951
23
28
EAYRDI
6
WxxL
No
RNA replication protein
Papaya mosaic potexvirus
229
P20951
153
158
LHFLPL
6
WxxL
No
RNA replication protein
Papaya mosaic potexvirus
230
P17779
216
221
HEFAHL
6
WxxL
No
RNA replication protein
Potato virus X (strain X3)
231
P17779
629
634
VGFKAL
6
WxxL
Yes
RNA replication protein
Potato virus X (strain X3)
232
P15402
216
221
HEFKQL
6
WxxL
No
RNA replication protein
White clover mosaic virus (strain O)
233
P15402
695
700
RYYLNI
6
WxxL
No
RNA replication protein
White clover mosaic virus (strain O)
234
Q04575
6
11
KLFDQI
6
WxxL
No
RNA replication protein
Shallot virus X
235
Q04575
215
220
HSYGTL
6
WxxL
No
RNA replication protein
Shallot virus X
236
Q04575
326
331
DIFAKL
6
WxxL
No
RNA replication protein
Shallot virus X
237
Q04575
353
358
NYFLFI
6
WxxL
No
RNA replication protein
Shallot virus X
238
Q04575
1450
1455
SFYKFI
6
WxxL
No
RNA replication protein
Shallot virus X
239
Q04575
1557
1562
QLYQSL
6
WxxL
No
RNA replication protein
Shallot virus X
240
Q6YNQ7
384
389
TQYRTL
6
WxxL
No
RNA replication protein
Botrytis virus X (isolate Botrytis cinerea/New Zealand/Howitt/2006)
241
Q6YNQ7
539
544
LRFTDL
6
WxxL
Yes
RNA replication protein
Botrytis virus X (isolate Botrytis cinerea/New Zealand/Howitt/2006)
242
P09395
629
634
VGFKAL
6
WxxL
Yes
RNA replication protein
Potato virus X
243
P22591
571
576
TTFPTL
6
WxxL
Yes
RNA replication protein
Potato virus X (strain CP)
244
P22591
629
634
VGFKAL
6
WxxL
Yes
RNA replication protein
Potato virus X (strain CP)
245
P28897
24
29
EAYKRI
6
WxxL
No
RNA replication protein
Strawberry mild yellow edge-associated virus
246
P28897
354
359
VNYFMV
6
WxxL
No
RNA replication protein
Strawberry mild yellow edge-associated virus
247
B1PS76
692
697
TAYTDV
6
WxxL
No
RNA-directed RNA polymerase
Lolium latent virus (isolate Lolium/USA/US1/-)
248
Q07630
329
334
DIFAKI
6
WxxL
No
RNA replication protein
Potato virus X (strain HB)
249
Q07630
571
576
TTFPTL
6
WxxL
Yes
RNA replication protein
Potato virus X (strain HB)
250
Q07630
629
634
VGFKAL
6
WxxL
Yes
RNA replication protein
Potato virus X (strain HB)
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Ioannis Nezis lab
|
University of Warwick