iLIR
@Viral
Home
Classification
ICTV
Caudovirales
Myoviridae
Podoviridae
Siphoviridae
Herpesvirales
Alloherpesviridae
Herpesviridae
Malacoherpesviridae
Ligamenvirales
Lipothrixviridae
Rudiviridae
Mononegavirales
Bornaviridae
Filoviridae
Mymonaviridae
Nyamiviridae
Paramyxoviridae
Pneumoviridae
Rhabdoviridae
Sunviridae
Unassigned
Nidovirales
Arteriviridae
Coronaviridae
Mesoniviridae
Roniviridae
Picornavirales
Dicistroviridae
Iflaviridae
Marnaviridae
Picornaviridae
Secoviridae
Unassigned
Tymovirales
Alphaflexiviridae
Betaflexiviridae
Gammaflexiviridae
Tymoviridae
Unassigned order
Baltimore system
dsDNA
Caudovirales
Myoviridae
Podoviridae
Siphoviridae
Herpesvirales
Alloherpesviridae
Herpesviridae
Malacoherpesviridae
Ligamenvirales
Lipothrixviridae
Rudiviridae
Unassigned order
dsRNA
Unassigned order
Amalgaviridae
Birnaviridae
Chrysoviridae
Cystoviridae
Endornaviridae
Hypoviridae
Megabirnaviridae
Partitiviridae
Picobirnaviridae
Quadriviridae
Reoviridae
Totiviridae
ssDNA
Unassigned order
Anelloviridae
Bidnaviridae
Circoviridae
Geminiviridae
Inoviridae
Nanoviridae
Microviridae
Mycodnaviridae
Parvoviridae
Pleolipoviridae
Spiraviridae
ssRNA (+)
Tymovirales
Alphaflexiviridae
Betaflexiviridae
Gammaflexiviridae
Tymoviridae
Picornavirales
Dicistroviridae
Picornaviridae
Secoviridae
Nidovirales
Arteriviridae
Coronaviridae
Mesoniviridae
Roniviridae
ssRNA (-)
Mononegavirales
Bornaviridae
Rhadbdoviridae
Filoviridae
Nyamaviridae
Paramyxoviridae
Unassigned order
Arenaviridae
Bunyaviridae
Ophioviridae
Orthomyxoviridae
ssRNA-RT
Retroviridae
dsDNA-RT
Caulimoviridae
Hepadnaviridae
Search
BLAST
ICTV
Baltimore system
Bibliography
Help
Links
iLIR Database
LIR Motif Search
LIR-containing proteins in
Alphaflexiviridae
>> EXPORT DATA
<< prev
1
2
3
4
5
6
7
...
13
14
next >>
S.No.
Uniprot ID
Start
End
LIR sequence
PSSM Score
▲
▼
Pattern
LIR in Anchor
Description
Species
251
P15098
90
95
SPWNGV
9
WxxL
No
Movement protein TGBp3
Narcissus mosaic virus
252
Q07632
92
97
EAYQAL
9
WxxL
No
Movement and silencing protein TGBp1
Potato virus X (strain HB)
253
Q00478
79
84
GPWRGL
9
WxxL
No
Movement protein TGBp3
Cymbidium mosaic virus (strain Singapore)
254
P20952
90
95
AKFQVL
9
WxxL
No
Movement and silencing protein TGBp1
Papaya mosaic potexvirus
255
P22592
92
97
EAYQAL
9
WxxL
No
Movement and silencing protein TGBp1
Potato virus X (strain CP)
256
P09499
189
194
YQWPTV
9
WxxL
No
Movement and silencing protein TGBp1
White clover mosaic virus (strain M)
257
P16597
7
12
EIWPLV
9
WxxL
No
Uncharacterized 14.7 kDa protein in coat protein coding strand
Papaya mosaic potexvirus
258
Q6YNQ5
329
334
DFFDAV
8
WxxL
No
Capsid protein
Botrytis virus X (isolate Botrytis cinerea/New Zealand/Howitt/2006)
259
P37993
177
182
DFFDAV
8
WxxL
No
Coat protein
Potato aucuba mosaic virus
260
Q00467
150
155
DFFDAV
8
WxxL
No
Coat protein
Cymbidium mosaic virus (strain Singapore)
261
P17782
195
200
AAFVKI
8
WxxL
Yes
Coat protein
Potato virus X (strain X3)
262
P10468
194
199
AAFVKI
8
WxxL
Yes
Coat protein
Potato virus X (strain Xc)
263
P28899
44
49
DPFRVL
8
WxxL
Yes
Coat protein
Strawberry mild yellow edge-associated virus
264
P62406
194
199
AAFVKI
8
WxxL
Yes
Coat protein
Potato virus X (strain CP)
265
P07699
195
200
AAFVKI
8
WxxL
Yes
Coat protein
Potato virus X
266
P31798
195
200
AAFVKI
8
WxxL
Yes
Coat protein
Potato virus X (strain UK3)
267
Q04583
75
80
RNFNTL
8
WxxL
No
Uncharacterized ORF4 protein
Shallot virus X
268
P20951
367
372
GMFKKL
8
WxxL
No
RNA replication protein
Papaya mosaic potexvirus
269
P20951
539
544
AEFPEL
8
WxxL
Yes
RNA replication protein
Papaya mosaic potexvirus
270
P20951
1106
1111
VEYENV
8
WxxL
No
RNA replication protein
Papaya mosaic potexvirus
271
P17779
410
415
VDFHPV
8
WxxL
No
RNA replication protein
Potato virus X (strain X3)
272
P15402
91
96
CTFLFL
8
WxxL
No
RNA replication protein
White clover mosaic virus (strain O)
273
P15402
200
205
NGFQYI
8
WxxL
No
RNA replication protein
White clover mosaic virus (strain O)
274
P15402
349
354
NSYSDI
8
WxxL
No
RNA replication protein
White clover mosaic virus (strain O)
275
P15402
648
653
EAFLAI
8
WxxL
No
RNA replication protein
White clover mosaic virus (strain O)
276
Q04575
807
812
HGFTAL
8
WxxL
Yes
RNA replication protein
Shallot virus X
277
Q6YNQ7
91
96
GPFTFI
8
WxxL
No
RNA replication protein
Botrytis virus X (isolate Botrytis cinerea/New Zealand/Howitt/2006)
278
Q918W3
108
113
PKFQDI
8
WxxL
No
RNA replication protein
Indian citrus ringspot virus (isolate Kinnow mandarin/India/K1/1996)
279
Q918W3
389
394
REFGKL
8
WxxL
No
RNA replication protein
Indian citrus ringspot virus (isolate Kinnow mandarin/India/K1/1996)
280
Q918W3
1456
1461
LQFELI
8
WxxL
No
RNA replication protein
Indian citrus ringspot virus (isolate Kinnow mandarin/India/K1/1996)
281
P15095
243
248
LTFQLV
8
xLIR
No
RNA replication protein
Narcissus mosaic virus
282
Q07518
819
824
YGFQPL
8
WxxL
No
RNA replication protein
Plantago asiatica mosaic potexvirus
283
P09395
410
415
VDFHPV
8
WxxL
No
RNA replication protein
Potato virus X
284
P22591
344
349
DKFSAV
8
WxxL
No
RNA replication protein
Potato virus X (strain CP)
285
B1PS76
504
509
EVFDAI
8
xLIR
Yes
RNA-directed RNA polymerase
Lolium latent virus (isolate Lolium/USA/US1/-)
286
B1PS76
1233
1238
KTFIQV
8
WxxL
Yes
RNA-directed RNA polymerase
Lolium latent virus (isolate Lolium/USA/US1/-)
287
Q07630
344
349
DKFSAV
8
WxxL
No
RNA replication protein
Potato virus X (strain HB)
288
P22168
192
197
SVYTLL
8
xLIR
No
RNA replication protein
Foxtail mosaic virus
289
P22168
351
356
NSFDQV
8
WxxL
No
RNA replication protein
Foxtail mosaic virus
290
P22168
776
781
RNYASL
8
WxxL
No
RNA replication protein
Foxtail mosaic virus
291
P22168
935
940
LFWATV
8
WxxL
No
RNA replication protein
Foxtail mosaic virus
292
Q6YI57
190
195
DFFDYI
8
WxxL
No
RNA replication protein
Sclerotinia sclerotiorum debilitation-associated virus (isolate Sclerotinia/China/Xie/-)
293
Q6YI57
471
476
GKFLTV
8
WxxL
No
RNA replication protein
Sclerotinia sclerotiorum debilitation-associated virus (isolate Sclerotinia/China/Xie/-)
294
Q6YI57
1395
1400
AEFLGV
8
WxxL
No
RNA replication protein
Sclerotinia sclerotiorum debilitation-associated virus (isolate Sclerotinia/China/Xie/-)
295
P09498
200
205
NGFQYI
8
WxxL
No
RNA replication protein
White clover mosaic virus (strain M)
296
P09498
349
354
NSYSDI
8
WxxL
No
RNA replication protein
White clover mosaic virus (strain M)
297
P09498
648
653
EAFLAI
8
WxxL
No
RNA replication protein
White clover mosaic virus (strain M)
298
Q00846
110
115
PHFVKL
8
WxxL
No
Movement and silencing protein TGBp1
Strawberry mild yellow edge-associated virus
299
P27331
23
28
AAFVLL
8
WxxL
No
Movement protein TGB2
Lily virus X
300
P22593
16
21
KVYIVL
8
xLIR
No
Movement protein TGB2
Potato virus X (strain CP)
Copyright ©
Ioannis Nezis lab
|
University of Warwick