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LIR Motif Search
LIR-containing proteins in
Betaflexiviridae
>> EXPORT DATA
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S.No.
Uniprot ID
Start
End
LIR sequence
PSSM Score
▲
▼
Pattern
LIR in Anchor
Description
Species
51
P17529
128
133
RIYVNL
7
WxxL
No
Coat protein
Potato virus M (strain Russian)
52
P17529
197
202
RLYAPV
4
WxxL
No
Coat protein
Potato virus M (strain Russian)
53
P17529
232
237
DCFDYV
8
WxxL
No
Coat protein
Potato virus M (strain Russian)
54
P17529
276
281
QVFSSL
3
WxxL
Yes
Coat protein
Potato virus M (strain Russian)
55
P54892
24
29
RIYSDV
5
WxxL
No
Putative movement protein
Apple chlorotic leaf spot virus (isolate apple)
56
P54892
85
90
VHWGAL
8
WxxL
No
Putative movement protein
Apple chlorotic leaf spot virus (isolate apple)
57
P54892
105
110
SGWCYV
12
WxxL
No
Putative movement protein
Apple chlorotic leaf spot virus (isolate apple)
58
P54892
160
165
VMFENL
7
WxxL
No
Putative movement protein
Apple chlorotic leaf spot virus (isolate apple)
59
P54892
225
230
ELFNYI
3
WxxL
No
Putative movement protein
Apple chlorotic leaf spot virus (isolate apple)
60
P54892
332
337
SSFDNI
10
WxxL
Yes
Putative movement protein
Apple chlorotic leaf spot virus (isolate apple)
61
Q67706
241
246
EVFETI
9
xLIR
Yes
Movement protein
Grapevine virus A (isolate Is 151)
62
P0C1U3
63
68
SDFKLL
13
WxxL
No
Putative movement protein
Apple stem grooving virus (strain Korea)
63
P0C1U3
81
86
NKYKYL
5
WxxL
No
Putative movement protein
Apple stem grooving virus (strain Korea)
64
P0C1U3
135
140
CCYFGL
-1
WxxL
No
Putative movement protein
Apple stem grooving virus (strain Korea)
65
P0C1U3
181
186
VAYRCV
0
WxxL
No
Putative movement protein
Apple stem grooving virus (strain Korea)
66
P0C1U3
270
275
RGFRSL
8
WxxL
Yes
Putative movement protein
Apple stem grooving virus (strain Korea)
67
Q91QZ2
85
90
LGFVPI
10
xLIR
No
Putative movement protein
Citrus leaf blotch virus (isolate Nagami kumquat/France/SRA-153/1984)
68
Q91QZ2
80
85
AAYLHL
8
WxxL
No
Putative movement protein
Citrus leaf blotch virus (isolate Nagami kumquat/France/SRA-153/1984)
69
Q91QZ2
328
333
PKFKTI
7
WxxL
Yes
Putative movement protein
Citrus leaf blotch virus (isolate Nagami kumquat/France/SRA-153/1984)
70
P36698
63
68
SDFKLL
13
WxxL
No
Probable movement protein
Apple stem grooving virus (strain P-209)
71
P36698
81
86
NKYKYL
5
WxxL
No
Probable movement protein
Apple stem grooving virus (strain P-209)
72
P36698
135
140
CCYFGL
-1
WxxL
No
Probable movement protein
Apple stem grooving virus (strain P-209)
73
P36698
181
186
VAYRCV
0
WxxL
No
Probable movement protein
Apple stem grooving virus (strain P-209)
74
P36698
270
275
RGFRSL
8
WxxL
Yes
Probable movement protein
Apple stem grooving virus (strain P-209)
75
P27739
26
31
RIYSDI
6
WxxL
No
Putative movement protein
Apple chlorotic leaf spot virus (isolate plum P863)
76
P27739
87
92
VHWGAL
8
WxxL
No
Putative movement protein
Apple chlorotic leaf spot virus (isolate plum P863)
77
P27739
107
112
SGWCYV
12
WxxL
No
Putative movement protein
Apple chlorotic leaf spot virus (isolate plum P863)
78
P27739
162
167
VMFENL
7
WxxL
No
Putative movement protein
Apple chlorotic leaf spot virus (isolate plum P863)
79
P27739
227
232
ELFNYI
3
WxxL
No
Putative movement protein
Apple chlorotic leaf spot virus (isolate plum P863)
80
Q67705
45
50
LGYQSI
10
xLIR
No
Uncharacterized ORF2 protein
Grapevine virus A (isolate Is 151)
81
Q67705
155
160
GDYSYV
11
WxxL
No
Uncharacterized ORF2 protein
Grapevine virus A (isolate Is 151)
82
Q67705
165
170
SGYKGL
8
WxxL
No
Uncharacterized ORF2 protein
Grapevine virus A (isolate Is 151)
83
Q6PLS1
854
859
PGYLTL
12
xLIR
No
Genome polyprotein
Apple stem grooving virus (strain Korea)
84
Q6PLS1
1151
1156
REFQSI
12
xLIR
No
Genome polyprotein
Apple stem grooving virus (strain Korea)
85
Q6PLS1
82
87
LLYICV
3
WxxL
No
Genome polyprotein
Apple stem grooving virus (strain Korea)
86
Q6PLS1
92
97
SSFKSV
8
WxxL
No
Genome polyprotein
Apple stem grooving virus (strain Korea)
87
Q6PLS1
126
131
GMYNAI
8
WxxL
No
Genome polyprotein
Apple stem grooving virus (strain Korea)
88
Q6PLS1
138
143
YRYGDV
1
WxxL
No
Genome polyprotein
Apple stem grooving virus (strain Korea)
89
Q6PLS1
163
168
NKFPKI
3
WxxL
No
Genome polyprotein
Apple stem grooving virus (strain Korea)
90
Q6PLS1
185
190
YLFETI
6
WxxL
No
Genome polyprotein
Apple stem grooving virus (strain Korea)
91
Q6PLS1
383
388
DKFCQV
5
WxxL
No
Genome polyprotein
Apple stem grooving virus (strain Korea)
92
Q6PLS1
497
502
VDYSKL
11
WxxL
No
Genome polyprotein
Apple stem grooving virus (strain Korea)
93
Q6PLS1
606
611
CVFKAI
1
WxxL
No
Genome polyprotein
Apple stem grooving virus (strain Korea)
94
Q6PLS1
682
687
KMYCTI
8
WxxL
No
Genome polyprotein
Apple stem grooving virus (strain Korea)
95
Q6PLS1
698
703
ECFIRL
6
WxxL
No
Genome polyprotein
Apple stem grooving virus (strain Korea)
96
Q6PLS1
770
775
DNFSSV
9
WxxL
No
Genome polyprotein
Apple stem grooving virus (strain Korea)
97
Q6PLS1
839
844
GTFMEV
8
WxxL
No
Genome polyprotein
Apple stem grooving virus (strain Korea)
98
Q6PLS1
937
942
EWFQSL
6
WxxL
No
Genome polyprotein
Apple stem grooving virus (strain Korea)
99
Q6PLS1
968
973
EDYGLV
11
WxxL
No
Genome polyprotein
Apple stem grooving virus (strain Korea)
100
Q6PLS1
1030
1035
VGFDFV
9
WxxL
No
Genome polyprotein
Apple stem grooving virus (strain Korea)
Copyright ©
Ioannis Nezis lab
|
University of Warwick