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LIR-containing proteins in
Betaflexiviridae
>> EXPORT DATA
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S.No.
Uniprot ID
Start
End
LIR sequence
PSSM Score
▲
▼
Pattern
LIR in Anchor
Description
Species
1
P54891
1009
1014
EGWRMI
17
WxxL
No
RNA-directed RNA polymerase
Apple chlorotic leaf spot virus (isolate apple)
2
P17965
553
558
EAWEVL
17
WxxL
No
RNA replication polyprotein
Potato virus M (strain Russian)
3
P27738
1008
1013
EGWRMI
17
WxxL
No
RNA-directed RNA polymerase
Apple chlorotic leaf spot virus (isolate plum P863)
4
Q64962
1998
2003
ADYTFI
16
xLIR
No
RNA replication polyprotein
Apple stem pitting virus (isolate PA66)
5
P17965
487
492
REWNAL
16
WxxL
No
RNA replication polyprotein
Potato virus M (strain Russian)
6
P54891
685
690
NDYLTL
15
WxxL
No
RNA-directed RNA polymerase
Apple chlorotic leaf spot virus (isolate apple)
7
P17965
1786
1791
EDYKFI
15
WxxL
No
RNA replication polyprotein
Potato virus M (strain Russian)
8
Q67704
1506
1511
REYEEL
15
xLIR
No
RNA replication protein
Grapevine virus A (isolate Is 151)
9
Q67704
1102
1107
SGWYTV
15
WxxL
No
RNA replication protein
Grapevine virus A (isolate Is 151)
10
P17526
82
87
DEYTLL
15
xLIR
No
Movement and silencing protein TGBp1
Potato virus M (strain Russian)
11
Q02106
247
252
DTFDFV
14
xLIR
No
Coat protein
Poplar mosaic virus (isolate ATCC Pv275)
12
P36309
1743
1748
FVWTLI
14
xLIR
No
Genome polyprotein
Apple stem grooving virus (strain P-209)
13
Q91QZ3
1544
1549
DSYDKV
14
xLIR
No
RNA replication polyprotein
Citrus leaf blotch virus (isolate Nagami kumquat/France/SRA-153/1984)
14
P37987
77
82
EDYAFI
14
WxxL
No
RNA replication protein (Fragment)
Chrysanthemum virus B
15
P27738
684
689
NDYLLL
14
WxxL
No
RNA-directed RNA polymerase
Apple chlorotic leaf spot virus (isolate plum P863)
16
P16652
21
26
LGWYVL
14
WxxL
No
Movement protein TGBp3
Potato virus S (strain Peruvian)
17
P0C1U3
63
68
SDFKLL
13
WxxL
No
Putative movement protein
Apple stem grooving virus (strain Korea)
18
P36698
63
68
SDFKLL
13
WxxL
No
Probable movement protein
Apple stem grooving virus (strain P-209)
19
Q6PLS1
1051
1056
TIWQFI
13
WxxL
No
Genome polyprotein
Apple stem grooving virus (strain Korea)
20
Q6PLS1
1395
1400
LDYLRL
13
WxxL
No
Genome polyprotein
Apple stem grooving virus (strain Korea)
21
P36309
1051
1056
TIWQFI
13
WxxL
No
Genome polyprotein
Apple stem grooving virus (strain P-209)
22
P36309
1395
1400
LDYLRL
13
WxxL
No
Genome polyprotein
Apple stem grooving virus (strain P-209)
23
P54891
119
124
KTYDIL
13
xLIR
No
RNA-directed RNA polymerase
Apple chlorotic leaf spot virus (isolate apple)
24
Q64962
1550
1555
TLWDSI
13
WxxL
No
RNA replication polyprotein
Apple stem pitting virus (isolate PA66)
25
Q64962
1619
1624
RWWTAL
13
WxxL
No
RNA replication polyprotein
Apple stem pitting virus (isolate PA66)
26
Q91QZ3
304
309
SDYNSI
13
WxxL
No
RNA replication polyprotein
Citrus leaf blotch virus (isolate Nagami kumquat/France/SRA-153/1984)
27
Q91QZ3
1844
1849
HDFDDL
13
WxxL
No
RNA replication polyprotein
Citrus leaf blotch virus (isolate Nagami kumquat/France/SRA-153/1984)
28
P22657
174
179
EDYKYI
13
WxxL
No
RNA replication protein (Fragment)
Potato virus S (strain Peruvian)
29
P17965
731
736
SVWMEI
13
WxxL
No
RNA replication polyprotein
Potato virus M (strain Russian)
30
Q67704
286
291
DNFTII
13
WxxL
No
RNA replication protein
Grapevine virus A (isolate Is 151)
31
P27738
119
124
KTYDIL
13
xLIR
No
RNA-directed RNA polymerase
Apple chlorotic leaf spot virus (isolate plum P863)
32
P17527
7
12
PDFTKV
13
xLIR
No
Movement protein TGB2
Potato virus M (strain Russian)
33
P27332
7
12
PDYTRV
13
WxxL
No
Movement protein TGB2
Lily symptomless virus
34
P37990
50
55
RTFVEL
13
xLIR
No
Movement protein TGBp3
Chrysanthemum virus B
35
Q67707
43
48
FGYIAL
12
xLIR
No
Capsid protein
Grapevine virus A (isolate Is 151)
36
Q91QZ1
12
17
NYWLAI
12
WxxL
No
Capsid protein
Citrus leaf blotch virus (isolate Nagami kumquat/France/SRA-153/1984)
37
P16653
221
226
DTFDYV
12
WxxL
No
Coat protein
Potato virus S (strain Peruvian)
38
P27335
219
224
DTFDYV
12
WxxL
No
Coat protein
Lily symptomless virus
39
P54892
105
110
SGWCYV
12
WxxL
No
Putative movement protein
Apple chlorotic leaf spot virus (isolate apple)
40
P27739
107
112
SGWCYV
12
WxxL
No
Putative movement protein
Apple chlorotic leaf spot virus (isolate plum P863)
41
Q6PLS1
854
859
PGYLTL
12
xLIR
No
Genome polyprotein
Apple stem grooving virus (strain Korea)
42
Q6PLS1
1151
1156
REFQSI
12
xLIR
No
Genome polyprotein
Apple stem grooving virus (strain Korea)
43
P36309
854
859
PGYLTL
12
xLIR
No
Genome polyprotein
Apple stem grooving virus (strain P-209)
44
P36309
968
973
EDYGLI
12
WxxL
No
Genome polyprotein
Apple stem grooving virus (strain P-209)
45
P17965
1426
1431
MDYQQL
12
WxxL
No
RNA replication polyprotein
Potato virus M (strain Russian)
46
P16651
77
82
QPWLLV
12
WxxL
No
Movement protein TGB2
Potato virus S (strain Peruvian)
47
P37988
92
97
SDFFAL
12
WxxL
No
Movement and silencing protein TGBp1
Chrysanthemum virus B
48
P37988
151
156
YDFDPV
12
WxxL
No
Movement and silencing protein TGBp1
Chrysanthemum virus B
49
Q02109
149
154
RDFFEV
12
WxxL
No
Movement and silencing protein TGBp1
Poplar mosaic virus (isolate ATCC Pv275)
50
P27332
77
82
QPWLLV
12
WxxL
No
Movement protein TGB2
Lily symptomless virus
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Ioannis Nezis lab
|
University of Warwick