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LIR Motif Search
LIR-containing proteins in
Retroviridae
>> EXPORT DATA
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S.No.
Uniprot ID
Start
End
LIR sequence
PSSM Score
▲
▼
Pattern
LIR in Anchor
Description
Species
301
P03327
49
54
GSWDPI
18
xLIR
No
Gag polyprotein
Avian sarcoma virus (strain Y73)
302
P03326
49
54
GSWDPI
18
xLIR
No
Gag polyprotein
Fujinami sarcoma virus
303
P04593
14
19
DRWEKI
18
WxxL
No
Gag polyprotein
Human immunodeficiency virus type 1 group M subtype B (isolate BH5)
304
Q70622
14
19
DRWEKI
18
WxxL
No
Gag polyprotein
Human immunodeficiency virus type 1 group M subtype B (isolate LW123)
305
P04594
14
19
DAWEKI
18
WxxL
No
Gag polyprotein
Human immunodeficiency virus type 1 group M subtype A (isolate MAL)
306
P12493
210
215
AEWDRL
18
WxxL
No
Gag polyprotein
Human immunodeficiency virus type 1 group M subtype B (isolate NY5)
307
P24736
206
211
AEWDRL
18
WxxL
No
Gag polyprotein
Human immunodeficiency virus type 1 group M subtype A (isolate U455)
308
P05889
210
215
AEWDRL
18
WxxL
No
Gag polyprotein (Fragment)
Human immunodeficiency virus type 1 group M subtype B (isolate WMJ22)
309
P04023
412
417
QDWLRV
18
WxxL
No
Retrovirus-related Gag polyprotein
Hamster intracisternal a-particle H18
310
P05887
14
19
DRWEKI
18
WxxL
No
Gag polyprotein
Human immunodeficiency virus type 1 group M subtype B (isolate CDC-451)
311
P05887
210
215
AEWDRL
18
WxxL
No
Gag polyprotein
Human immunodeficiency virus type 1 group M subtype B (isolate CDC-451)
312
Q75001
14
19
DAWEKI
18
WxxL
No
Gag polyprotein
Human immunodeficiency virus type 1 group M subtype C (isolate ETH2220)
313
Q75001
208
213
AEWDRL
18
WxxL
No
Gag polyprotein
Human immunodeficiency virus type 1 group M subtype C (isolate ETH2220)
314
P04591
14
19
DRWEKI
18
WxxL
No
Gag polyprotein
Human immunodeficiency virus type 1 group M subtype B (isolate HXB2)
315
P06444
49
54
GSWDPI
18
xLIR
No
Gag polyprotein
Avian myelocytomatosis virus HBI
316
O12157
208
213
AEWDRL
18
WxxL
No
Gag polyprotein
Human immunodeficiency virus type 1 group M subtype C (isolate 92BR025)
317
Q9QBY4
14
19
DAWEKI
18
WxxL
No
Gag polyprotein
Human immunodeficiency virus type 1 group M subtype K (isolate 96CM-MP535)
318
Q9QBY4
206
211
AEWDRL
18
WxxL
No
Gag polyprotein
Human immunodeficiency virus type 1 group M subtype K (isolate 96CM-MP535)
319
P03347
14
19
DRWEKI
18
WxxL
No
Gag polyprotein
Human immunodeficiency virus type 1 group M subtype B (isolate BH10)
320
O92954
49
54
GSWDPI
18
xLIR
No
Gag-Pro polyprotein
Rous sarcoma virus (strain Schmidt-Ruppin B)
321
P17282
218
223
AEWDRL
18
WxxL
No
Gag polyprotein
Simian immunodeficiency virus (isolate CPZ GAB1)
322
Q02843
266
271
RKWVIL
18
WxxL
No
Gag polyprotein
Simian immunodeficiency virus agm.grivet (isolate AGM gr-1)
323
P05888
14
19
DRWEKI
18
WxxL
No
Gag polyprotein
Human immunodeficiency virus type 1 group M subtype B (isolate MN)
324
P05888
213
218
AEWDRL
18
WxxL
No
Gag polyprotein
Human immunodeficiency virus type 1 group M subtype B (isolate MN)
325
P05890
210
215
AEWDRL
18
WxxL
No
Gag polyprotein
Human immunodeficiency virus type 1 group M subtype B (isolate RF/HAT3)
326
O89939
14
19
DAWEKI
18
WxxL
No
Gag polyprotein
Human immunodeficiency virus type 1 group M subtype G (isolate SE6165)
327
Q9QSR4
206
211
AEWDRL
18
WxxL
No
Gag polyprotein
Human immunodeficiency virus type 1 group M subtype F1 (isolate VI850)
328
P03322
49
54
GSWDPI
18
xLIR
No
Gag-Pro polyprotein
Rous sarcoma virus (strain Prague C)
329
P22381
253
258
KSWIIL
18
xLIR
No
Gag polyprotein
Simian immunodeficiency virus (isolate GB1)
330
O93182
14
19
DAWEKI
18
WxxL
No
Gag polyprotein
Human immunodeficiency virus type 1 group M subtype H (isolate 90CF056)
331
O89291
14
19
DAWEKI
18
WxxL
No
Gag polyprotein
Human immunodeficiency virus type 1 group M subtype F1 (isolate 93BR020)
332
O89291
206
211
AEWDRL
18
WxxL
No
Gag polyprotein
Human immunodeficiency virus type 1 group M subtype F1 (isolate 93BR020)
333
P0C1K7
209
214
AEWDRI
18
WxxL
No
Gag polyprotein
Human immunodeficiency virus type 1 group M subtype G (isolate 92NG083)
334
Q73367
14
19
DRWEKI
18
WxxL
No
Gag polyprotein
Human immunodeficiency virus type 1 group M subtype B (strain 89.6)
335
Q73367
210
215
AEWDRL
18
WxxL
No
Gag polyprotein
Human immunodeficiency virus type 1 group M subtype B (strain 89.6)
336
P04592
210
215
AEWDRL
18
WxxL
No
Gag polyprotein
Human immunodeficiency virus type 1 group M subtype D (isolate ELI)
337
P12494
14
19
DRWEKI
18
WxxL
No
Gag polyprotein
Human immunodeficiency virus type 1 group M subtype B (isolate JH32)
338
P12494
210
215
AEWDRL
18
WxxL
No
Gag polyprotein
Human immunodeficiency virus type 1 group M subtype B (isolate JH32)
339
Q9QBZ2
14
19
DAWEKI
18
WxxL
No
Gag polyprotein
Human immunodeficiency virus type 1 group M subtype F2 (isolate MP257)
340
Q9QBZ2
210
215
AEWDRL
18
WxxL
No
Gag polyprotein
Human immunodeficiency virus type 1 group M subtype F2 (isolate MP257)
341
Q9QBZ6
14
19
DAWEKI
18
WxxL
No
Gag polyprotein
Human immunodeficiency virus type 1 group M subtype F2 (isolate MP255)
342
Q9QBZ6
206
211
AEWDRL
18
WxxL
No
Gag polyprotein
Human immunodeficiency virus type 1 group M subtype F2 (isolate MP255)
343
P18800
207
212
AEWDRL
18
WxxL
No
Gag polyprotein
Human immunodeficiency virus type 1 group M subtype D (isolate NDK)
344
Q9Q721
14
19
DAWEKI
18
WxxL
No
Gag polyprotein
Human immunodeficiency virus type 1 group M subtype H (isolate VI991)
345
Q9Q721
212
217
AEWDRL
18
WxxL
No
Gag polyprotein
Human immunodeficiency virus type 1 group M subtype H (isolate VI991)
346
P12495
14
19
DAWEKI
18
WxxL
No
Gag polyprotein
Human immunodeficiency virus type 1 group M subtype D (isolate Z2/CDC-Z34)
347
P12495
211
216
AEWDRL
18
WxxL
No
Gag polyprotein
Human immunodeficiency virus type 1 group M subtype D (isolate Z2/CDC-Z34)
348
O12158
208
213
AEWDRL
18
WxxL
No
Gag-Pol polyprotein
Human immunodeficiency virus type 1 group M subtype C (isolate 92BR025)
349
Q9QBY3
14
19
DAWEKI
18
WxxL
No
Gag-Pol polyprotein
Human immunodeficiency virus type 1 group M subtype K (isolate 96CM-MP535)
350
Q9QBY3
206
211
AEWDRL
18
WxxL
No
Gag-Pol polyprotein
Human immunodeficiency virus type 1 group M subtype K (isolate 96CM-MP535)
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Ioannis Nezis lab
|
University of Warwick