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LIR Motif Search
LIR-containing proteins in
Retroviridae
>> EXPORT DATA
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S.No.
Uniprot ID
Start
End
LIR sequence
PSSM Score
▲
▼
Pattern
LIR in Anchor
Description
Species
51
P11365
269
274
ADWQTV
21
xLIR
No
Retrovirus-related Gag polyprotein
Mouse intracisternal a-particle MIA14
52
P31622
601
606
RDWTSV
21
xLIR
No
Gag polyprotein
Sheep pulmonary adenomatosis virus
53
P03343
208
213
EDWDNL
21
WxxL
No
Gag polyprotein (Fragment)
Mouse mammary tumor virus (strain GR)
54
P24736
14
19
DSWEKI
21
xLIR
No
Gag polyprotein
Human immunodeficiency virus type 1 group M subtype A (isolate U455)
55
Q8AII2
14
19
DTWESI
21
xLIR
No
Gag polyprotein
Simian immunodeficiency virus (isolate TAN1)
56
P0C1K7
14
19
DSWEKI
21
xLIR
No
Gag polyprotein
Human immunodeficiency virus type 1 group M subtype G (isolate 92NG083)
57
P12500
10
15
PDWTFV
21
xLIR
No
Pol polyprotein (Fragment)
Simian immunodeficiency virus agm.vervet (isolate AGM266)
58
Q8AII1
14
19
DTWESI
21
xLIR
No
Gag-Pol polyprotein
Simian immunodeficiency virus (isolate TAN1)
59
O41798
14
19
DSWEKI
21
xLIR
No
Gag-Pol polyprotein
Human immunodeficiency virus type 1 group M subtype G (isolate 92NG083)
60
P24740
14
19
DSWEKI
21
xLIR
No
Gag-Pol polyprotein
Human immunodeficiency virus type 1 group M subtype A (isolate U455)
61
P15834
5
10
KDWIVV
21
xLIR
No
Virion infectivity factor
Human immunodeficiency virus type 2 subtype B (isolate D205)
62
P29170
198
203
GDWKIL
20
WxxL
No
Protein Bel-2
Simian foamy virus type 1
63
O56861
878
883
SSWETI
20
xLIR
No
Envelope glycoprotein gp130
Feline foamy virus
64
P22380
476
481
DDWMQV
20
WxxL
No
Envelope glycoprotein gp160
Simian immunodeficiency virus (isolate GB1)
65
Q75008
783
788
RGWETL
20
xLIR
No
Envelope glycoprotein gp160
Human immunodeficiency virus type 1 group M subtype C (isolate ETH2220)
66
Q9QBZ0
782
787
RGWEVL
20
xLIR
No
Envelope glycoprotein gp160
Human immunodeficiency virus type 1 group M subtype F2 (isolate MP257)
67
P19549
784
789
RGWEVL
20
xLIR
No
Envelope glycoprotein gp160
Human immunodeficiency virus type 1 group M subtype B (isolate SF33)
68
P23073
656
661
IDWTFI
20
WxxL
No
Envelope glycoprotein gp130
Simian foamy virus type 1
69
O12164
788
793
RGWEIL
20
xLIR
No
Envelope glycoprotein gp160
Human immunodeficiency virus type 1 group M subtype C (isolate 92BR025)
70
P12488
784
789
RGWEVL
20
xLIR
No
Envelope glycoprotein gp160
Human immunodeficiency virus type 1 group M subtype B (isolate BRVA)
71
P20871
780
785
RGWEIL
20
xLIR
No
Envelope glycoprotein gp160
Human immunodeficiency virus type 1 group M subtype B (isolate JRCSF)
72
P05877
788
793
RGWEVL
20
xLIR
No
Envelope glycoprotein gp160
Human immunodeficiency virus type 1 group M subtype B (isolate MN)
73
Q9WC69
782
787
RGWEIL
20
xLIR
No
Envelope glycoprotein gp160
Human immunodeficiency virus type 1 group M subtype J (isolate SE9173)
74
P05879
800
805
RGWEVL
20
xLIR
No
Envelope glycoprotein gp160
Human immunodeficiency virus type 1 group M subtype B (isolate CDC-451)
75
P20888
787
792
RGWEVL
20
xLIR
No
Envelope glycoprotein gp160
Human immunodeficiency virus type 1 group M subtype B (isolate OYI)
76
Q9WC60
780
785
RGWEIL
20
xLIR
No
Envelope glycoprotein gp160
Human immunodeficiency virus type 1 group M subtype J (isolate SE9280)
77
P05881
788
793
RGWETL
20
xLIR
No
Envelope glycoprotein gp160
Human immunodeficiency virus type 1 group M subtype A (isolate Z321)
78
P03385
189
194
SSWDFI
20
xLIR
No
Envelope glycoprotein
Moloney murine leukemia virus (isolate Shinnick)
79
P04581
785
790
RGWDIL
20
xLIR
No
Envelope glycoprotein gp160
Human immunodeficiency virus type 1 group M subtype D (isolate ELI)
80
P27399
649
654
IDWTFI
20
WxxL
No
Envelope glycoprotein gp130
Simian foamy virus type 3 (strain LK3)
81
P03373
317
322
EEWELI
20
xLIR
No
Gag polyprotein (Fragment)
Avian erythroblastosis virus (strain ES4)
82
P25058
16
21
SDWLNL
20
WxxL
Yes
Gag polyprotein
Bovine leukemia virus (isolate Australian)
83
P03344
16
21
SDWLNL
20
WxxL
Yes
Gag polyprotein
Bovine leukemia virus (isolate Japanese BLV-1)
84
P04594
216
221
ADWDRV
20
WxxL
No
Gag polyprotein
Human immunodeficiency virus type 1 group M subtype A (isolate MAL)
85
P21411
416
421
SDWFFL
20
WxxL
Yes
Gag polyprotein
Squirrel monkey retrovirus
86
P18800
14
19
DTWERI
20
WxxL
No
Gag polyprotein
Human immunodeficiency virus type 1 group M subtype D (isolate NDK)
87
Q8AII1
1026
1031
PEWEFI
20
xLIR
No
Gag-Pol polyprotein
Simian immunodeficiency virus (isolate TAN1)
88
P04026
366
371
SDWAVL
20
WxxL
No
Putative Pol polyprotein
Hamster intracisternal a-particle H18
89
P05897
1007
1012
PEWDFI
20
xLIR
No
Gag-Pol polyprotein
Simian immunodeficiency virus (isolate K6W)
90
P04588
216
221
ADWDRV
20
WxxL
No
Gag-Pol polyprotein
Human immunodeficiency virus type 1 group M subtype A (isolate MAL)
91
P17283
948
953
PEWEFI
20
xLIR
No
Gag-Pol polyprotein
Simian immunodeficiency virus (isolate CPZ GAB1)
92
P05896
1007
1012
PEWDFI
20
xLIR
No
Gag-Pol polyprotein
Simian immunodeficiency virus (isolate Mm142-83)
93
P18802
14
19
DTWERI
20
WxxL
No
Gag-Pol polyprotein
Human immunodeficiency virus type 1 group M subtype D (isolate NDK)
94
P51519
371
376
LDWLYI
19
WxxL
No
Envelope glycoprotein
Bovine leukemia virus
95
P25507
371
376
LDWLYI
19
WxxL
No
Envelope glycoprotein
Bovine leukemia virus (isolate Belgium LB59)
96
P03380
371
376
LDWLYI
19
WxxL
No
Envelope glycoprotein
Bovine leukemia virus (isolate Japanese BLV-1)
97
P31819
793
798
KGWEVL
19
xLIR
No
Envelope glycoprotein gp160
Human immunodeficiency virus type 1 group M subtype B (isolate KB-1/ETR)
98
P31819
670
675
DKWDSL
19
WxxL
No
Envelope glycoprotein gp160
Human immunodeficiency virus type 1 group M subtype B (isolate KB-1/ETR)
99
P05878
788
793
RGWEAL
19
xLIR
No
Envelope glycoprotein gp160
Human immunodeficiency virus type 1 group M subtype B (isolate SC)
100
Q9QSQ7
764
769
RGWEAL
19
xLIR
No
Envelope glycoprotein gp160
Human immunodeficiency virus type 1 group M subtype F1 (isolate VI850)
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Ioannis Nezis lab
|
University of Warwick