ILIR Viral

LIR-containing proteins in Tymoviridae

S.No.	Uniprot ID	Start	End	LIR sequence	PSSM Score ▲ ▼	Pattern	LIR in Anchor	Description	Species
101	P20128	1434	1439	QLFHSL	2	WxxL	No	RNA replicase polyprotein	Turnip yellow mosaic virus (isolate Australia)
102	P20128	1465	1470	NEYAQL	7	WxxL	No	RNA replicase polyprotein	Turnip yellow mosaic virus (isolate Australia)
103	P20128	1523	1528	HDYVIL	15	WxxL	No	RNA replicase polyprotein	Turnip yellow mosaic virus (isolate Australia)
104	P20128	1534	1539	KKYQRI	8	WxxL	No	RNA replicase polyprotein	Turnip yellow mosaic virus (isolate Australia)
105	P20128	1620	1625	TQFGPL	3	WxxL	No	RNA replicase polyprotein	Turnip yellow mosaic virus (isolate Australia)
106	P20128	1676	1681	HDWPSV	14	WxxL	No	RNA replicase polyprotein	Turnip yellow mosaic virus (isolate Australia)
107	P20128	1715	1720	ALFCKL	2	WxxL	No	RNA replicase polyprotein	Turnip yellow mosaic virus (isolate Australia)
108	P20128	1749	1754	SLWHLL	11	WxxL	No	RNA replicase polyprotein	Turnip yellow mosaic virus (isolate Australia)
109	P10358	398	403	LSFLTL	10	xLIR	No	RNA replicase polyprotein	Turnip yellow mosaic virus
110	P10358	1049	1054	RGYLDL	12	xLIR	No	RNA replicase polyprotein	Turnip yellow mosaic virus
111	P10358	1284	1289	RDFVTV	16	xLIR	Yes	RNA replicase polyprotein	Turnip yellow mosaic virus
112	P10358	98	103	SKFNKL	6	WxxL	No	RNA replicase polyprotein	Turnip yellow mosaic virus
113	P10358	108	113	SNFREL	8	WxxL	No	RNA replicase polyprotein	Turnip yellow mosaic virus
114	P10358	134	139	PVFPTI	3	WxxL	No	RNA replicase polyprotein	Turnip yellow mosaic virus
115	P10358	165	170	RLYASL	5	WxxL	No	RNA replicase polyprotein	Turnip yellow mosaic virus
116	P10358	182	187	SFYPKL	3	WxxL	No	RNA replicase polyprotein	Turnip yellow mosaic virus
117	P10358	216	221	HSWLRI	14	WxxL	No	RNA replicase polyprotein	Turnip yellow mosaic virus
118	P10358	237	242	ESWGPV	13	WxxL	No	RNA replicase polyprotein	Turnip yellow mosaic virus
119	P10358	309	314	AVYNAL	4	WxxL	No	RNA replicase polyprotein	Turnip yellow mosaic virus
120	P10358	348	353	NAWDNL	12	WxxL	No	RNA replicase polyprotein	Turnip yellow mosaic virus
121	P10358	354	359	QTFALL	6	WxxL	No	RNA replicase polyprotein	Turnip yellow mosaic virus
122	P10358	367	372	VVYHVL	3	WxxL	No	RNA replicase polyprotein	Turnip yellow mosaic virus
123	P10358	385	390	QHWRRL	9	WxxL	No	RNA replicase polyprotein	Turnip yellow mosaic virus
124	P10358	405	410	QRFLPL	6	WxxL	No	RNA replicase polyprotein	Turnip yellow mosaic virus
125	P10358	664	669	VLFPEI	1	WxxL	Yes	RNA replicase polyprotein	Turnip yellow mosaic virus
126	P10358	747	752	LPFEEL	8	WxxL	Yes	RNA replicase polyprotein	Turnip yellow mosaic virus
127	P10358	798	803	HLWESL	12	WxxL	No	RNA replicase polyprotein	Turnip yellow mosaic virus
128	P10358	929	934	NGFDGV	7	WxxL	Yes	RNA replicase polyprotein	Turnip yellow mosaic virus
129	P10358	1123	1128	NAWQGV	10	WxxL	No	RNA replicase polyprotein	Turnip yellow mosaic virus
130	P10358	1150	1155	LTFNSL	6	WxxL	No	RNA replicase polyprotein	Turnip yellow mosaic virus
131	P10358	1233	1238	RYFPSL	3	WxxL	No	RNA replicase polyprotein	Turnip yellow mosaic virus
132	P10358	1345	1350	EFFDSL	7	WxxL	Yes	RNA replicase polyprotein	Turnip yellow mosaic virus
133	P10358	1434	1439	QLFHSL	2	WxxL	No	RNA replicase polyprotein	Turnip yellow mosaic virus
134	P10358	1465	1470	NEYAQL	7	WxxL	No	RNA replicase polyprotein	Turnip yellow mosaic virus
135	P10358	1523	1528	HDYVIL	15	WxxL	No	RNA replicase polyprotein	Turnip yellow mosaic virus
136	P10358	1534	1539	KKYQRI	8	WxxL	No	RNA replicase polyprotein	Turnip yellow mosaic virus
137	P10358	1620	1625	TQFGPL	3	WxxL	No	RNA replicase polyprotein	Turnip yellow mosaic virus
138	P10358	1676	1681	HDWPSV	14	WxxL	No	RNA replicase polyprotein	Turnip yellow mosaic virus
139	P10358	1715	1720	ALFCKL	2	WxxL	No	RNA replicase polyprotein	Turnip yellow mosaic virus
140	P10358	1749	1754	SLWHLL	11	WxxL	No	RNA replicase polyprotein	Turnip yellow mosaic virus
141	Q91TW9	183	188	SSFTHL	11	xLIR	No	Genome polyprotein	Maize rayado fino virus (isolate Costa Rica/Guapiles)
142	Q91TW9	296	301	KVYDAL	8	xLIR	No	Genome polyprotein	Maize rayado fino virus (isolate Costa Rica/Guapiles)
143	Q91TW9	409	414	FGFDII	13	xLIR	No	Genome polyprotein	Maize rayado fino virus (isolate Costa Rica/Guapiles)
144	Q91TW9	984	989	RGYLDL	12	xLIR	No	Genome polyprotein	Maize rayado fino virus (isolate Costa Rica/Guapiles)
145	Q91TW9	1281	1286	ESFESL	12	xLIR	Yes	Genome polyprotein	Maize rayado fino virus (isolate Costa Rica/Guapiles)
146	Q91TW9	105	110	EKFAKL	6	WxxL	No	Genome polyprotein	Maize rayado fino virus (isolate Costa Rica/Guapiles)
147	Q91TW9	115	120	PNFAHL	6	WxxL	No	Genome polyprotein	Maize rayado fino virus (isolate Costa Rica/Guapiles)
148	Q91TW9	121	126	INYRLV	4	WxxL	No	Genome polyprotein	Maize rayado fino virus (isolate Costa Rica/Guapiles)
149	Q91TW9	172	177	KIYASV	3	WxxL	No	Genome polyprotein	Maize rayado fino virus (isolate Costa Rica/Guapiles)
150	Q91TW9	235	240	HEFFSV	5	WxxL	No	Genome polyprotein	Maize rayado fino virus (isolate Costa Rica/Guapiles)