ILIR Viral

LIR-containing proteins in Tymoviridae

S.No.	Uniprot ID	Start	End	LIR sequence	PSSM Score ▲ ▼	Pattern	LIR in Anchor	Description	Species
1	P35928	216	221	LDWLKI	20	xLIR	No	RNA replicase polyprotein	Erysimum latent virus
2	Q91TW9	944	949	DEWKAL	19	WxxL	No	Genome polyprotein	Maize rayado fino virus (isolate Costa Rica/Guapiles)
3	P36304	546	551	PMWLAI	17	xLIR	No	RNA replicase polyprotein	Kennedya yellow mosaic virus (strain Jervis bay)
4	P20126	216	221	PSWLKI	17	xLIR	No	RNA replicase polyprotein	Eggplant mosaic virus
5	Q8UZB6	1897	1902	PDWGSL	17	WxxL	No	RNA replication protein	Grapevine fleck virus (isolate Italy/MT48)
6	P03608	73	78	SLWVTI	16	WxxL	No	Coat protein	Turnip yellow mosaic virus
7	P20125	73	78	SLWVTI	16	WxxL	No	Coat protein	Turnip yellow mosaic virus (isolate Australia)
8	P20128	1284	1289	RDFVTV	16	xLIR	Yes	RNA replicase polyprotein	Turnip yellow mosaic virus (isolate Australia)
9	P10358	1284	1289	RDFVTV	16	xLIR	Yes	RNA replicase polyprotein	Turnip yellow mosaic virus
10	Q91TW9	1611	1616	DQWSAI	16	WxxL	No	Genome polyprotein	Maize rayado fino virus (isolate Costa Rica/Guapiles)
11	P36304	216	221	LSWLKI	16	xLIR	No	RNA replicase polyprotein	Kennedya yellow mosaic virus (strain Jervis bay)
12	P20126	791	796	DLWLSL	16	WxxL	No	RNA replicase polyprotein	Eggplant mosaic virus
13	P28477	1284	1289	RDFVTV	16	xLIR	Yes	RNA replicase polyprotein	Turnip yellow mosaic virus (isolate TYMC)
14	Q8UZB6	450	455	EAWDHL	16	WxxL	No	RNA replication protein	Grapevine fleck virus (isolate Italy/MT48)
15	P19128	48	53	ADFVSI	15	xLIR	No	Coat protein	Cacao yellow mosaic virus
16	Q8UZB3	100	105	SPWLSL	15	WxxL	Yes	Uncharacterized protein ORF4	Grapevine fleck virus (isolate Italy/MT48)
17	P20127	216	221	ISWLKL	15	WxxL	No	RNA replicase polyprotein	Ononis yellow mosaic virus
18	P20127	582	587	QPWEEI	15	WxxL	Yes	RNA replicase polyprotein	Ononis yellow mosaic virus
19	P20128	1523	1528	HDYVIL	15	WxxL	No	RNA replicase polyprotein	Turnip yellow mosaic virus (isolate Australia)
20	P10358	1523	1528	HDYVIL	15	WxxL	No	RNA replicase polyprotein	Turnip yellow mosaic virus
21	P35928	1103	1108	GDFTFL	15	xLIR	No	RNA replicase polyprotein	Erysimum latent virus
22	P35928	1426	1431	HDYVIL	15	WxxL	No	RNA replicase polyprotein	Erysimum latent virus
23	P28477	1523	1528	HDYVIL	15	WxxL	No	RNA replicase polyprotein	Turnip yellow mosaic virus (isolate TYMC)
24	P20127	329	334	RAWDNL	14	WxxL	No	RNA replicase polyprotein	Ononis yellow mosaic virus
25	P20127	726	731	QLWEFL	14	WxxL	No	RNA replicase polyprotein	Ononis yellow mosaic virus
26	P20127	1449	1454	HDFVIL	14	WxxL	No	RNA replicase polyprotein	Ononis yellow mosaic virus
27	P20128	216	221	HSWLRI	14	WxxL	No	RNA replicase polyprotein	Turnip yellow mosaic virus (isolate Australia)
28	P20128	1676	1681	HDWPSV	14	WxxL	No	RNA replicase polyprotein	Turnip yellow mosaic virus (isolate Australia)
29	P10358	216	221	HSWLRI	14	WxxL	No	RNA replicase polyprotein	Turnip yellow mosaic virus
30	P10358	1676	1681	HDWPSV	14	WxxL	No	RNA replicase polyprotein	Turnip yellow mosaic virus
31	Q91TW9	334	339	SAWDNL	14	WxxL	No	Genome polyprotein	Maize rayado fino virus (isolate Costa Rica/Guapiles)
32	P36304	237	242	ESWGPL	14	WxxL	No	RNA replicase polyprotein	Kennedya yellow mosaic virus (strain Jervis bay)
33	P36304	344	349	SAWDNL	14	WxxL	No	RNA replicase polyprotein	Kennedya yellow mosaic virus (strain Jervis bay)
34	P36304	825	830	RLWTSL	14	WxxL	No	RNA replicase polyprotein	Kennedya yellow mosaic virus (strain Jervis bay)
35	P36304	1553	1558	HDFVIL	14	WxxL	No	RNA replicase polyprotein	Kennedya yellow mosaic virus (strain Jervis bay)
36	P35928	237	242	ESWGPL	14	WxxL	No	RNA replicase polyprotein	Erysimum latent virus
37	P35928	1651	1656	SLWQLL	14	WxxL	No	RNA replicase polyprotein	Erysimum latent virus
38	P28477	216	221	HSWLRI	14	WxxL	No	RNA replicase polyprotein	Turnip yellow mosaic virus (isolate TYMC)
39	P28477	1676	1681	HDWPSV	14	WxxL	No	RNA replicase polyprotein	Turnip yellow mosaic virus (isolate TYMC)
40	Q8UZB6	359	364	ESWFSV	14	WxxL	No	RNA replication protein	Grapevine fleck virus (isolate Italy/MT48)
41	Q8UZB6	562	567	PSWSPV	14	WxxL	No	RNA replication protein	Grapevine fleck virus (isolate Italy/MT48)
42	Q8UZB6	829	834	DLWATL	14	WxxL	No	RNA replication protein	Grapevine fleck virus (isolate Italy/MT48)
43	Q8UZB6	1634	1639	HDYLIL	14	WxxL	No	RNA replication protein	Grapevine fleck virus (isolate Italy/MT48)
44	P20131	76	81	RDFSPL	13	WxxL	Yes	69 kDa protein	Turnip yellow mosaic virus (isolate Australia)
45	P28478	76	81	RDFSPL	13	WxxL	Yes	69 kDa protein	Turnip yellow mosaic virus (isolate TYMC)
46	P10357	76	81	RDFSPL	13	WxxL	Yes	69 kDa protein	Turnip yellow mosaic virus
47	P20127	617	622	ESFEVL	13	xLIR	Yes	RNA replicase polyprotein	Ononis yellow mosaic virus
48	P20127	1271	1276	ESFEEL	13	xLIR	Yes	RNA replicase polyprotein	Ononis yellow mosaic virus
49	P20127	237	242	ESWGPV	13	WxxL	No	RNA replicase polyprotein	Ononis yellow mosaic virus
50	P20128	237	242	ESWGPV	13	WxxL	No	RNA replicase polyprotein	Turnip yellow mosaic virus (isolate Australia)