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iLIR Database
LIR Motif Search
LIR-containing proteins in
Tymoviridae
>> EXPORT DATA
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S.No.
Uniprot ID
Start
End
LIR sequence
PSSM Score
▲
▼
Pattern
LIR in Anchor
Description
Species
301
P28477
165
170
RLYASL
5
WxxL
No
RNA replicase polyprotein
Turnip yellow mosaic virus (isolate TYMC)
302
P28477
182
187
SFYPKL
3
WxxL
No
RNA replicase polyprotein
Turnip yellow mosaic virus (isolate TYMC)
303
P28477
216
221
HSWLRI
14
WxxL
No
RNA replicase polyprotein
Turnip yellow mosaic virus (isolate TYMC)
304
P28477
237
242
ESWGPV
13
WxxL
No
RNA replicase polyprotein
Turnip yellow mosaic virus (isolate TYMC)
305
P28477
309
314
AVYNAL
4
WxxL
No
RNA replicase polyprotein
Turnip yellow mosaic virus (isolate TYMC)
306
P28477
348
353
NAWDNL
12
WxxL
No
RNA replicase polyprotein
Turnip yellow mosaic virus (isolate TYMC)
307
P28477
354
359
QTFALL
6
WxxL
No
RNA replicase polyprotein
Turnip yellow mosaic virus (isolate TYMC)
308
P28477
367
372
VVYHVL
3
WxxL
No
RNA replicase polyprotein
Turnip yellow mosaic virus (isolate TYMC)
309
P28477
385
390
QHWRRL
9
WxxL
No
RNA replicase polyprotein
Turnip yellow mosaic virus (isolate TYMC)
310
P28477
405
410
QRFLPL
6
WxxL
No
RNA replicase polyprotein
Turnip yellow mosaic virus (isolate TYMC)
311
P28477
664
669
VLFPEI
1
WxxL
Yes
RNA replicase polyprotein
Turnip yellow mosaic virus (isolate TYMC)
312
P28477
747
752
LPFEEL
8
WxxL
Yes
RNA replicase polyprotein
Turnip yellow mosaic virus (isolate TYMC)
313
P28477
798
803
HLWESL
12
WxxL
No
RNA replicase polyprotein
Turnip yellow mosaic virus (isolate TYMC)
314
P28477
929
934
NGFDGV
7
WxxL
Yes
RNA replicase polyprotein
Turnip yellow mosaic virus (isolate TYMC)
315
P28477
1123
1128
NAWQGV
10
WxxL
No
RNA replicase polyprotein
Turnip yellow mosaic virus (isolate TYMC)
316
P28477
1150
1155
LTFNSL
6
WxxL
No
RNA replicase polyprotein
Turnip yellow mosaic virus (isolate TYMC)
317
P28477
1233
1238
RYFPSL
3
WxxL
No
RNA replicase polyprotein
Turnip yellow mosaic virus (isolate TYMC)
318
P28477
1345
1350
EFFDSL
7
WxxL
Yes
RNA replicase polyprotein
Turnip yellow mosaic virus (isolate TYMC)
319
P28477
1434
1439
QLFHSL
2
WxxL
No
RNA replicase polyprotein
Turnip yellow mosaic virus (isolate TYMC)
320
P28477
1465
1470
NEYAQL
7
WxxL
No
RNA replicase polyprotein
Turnip yellow mosaic virus (isolate TYMC)
321
P28477
1523
1528
HDYVIL
15
WxxL
No
RNA replicase polyprotein
Turnip yellow mosaic virus (isolate TYMC)
322
P28477
1534
1539
KKYQRI
8
WxxL
No
RNA replicase polyprotein
Turnip yellow mosaic virus (isolate TYMC)
323
P28477
1620
1625
TQFGPL
3
WxxL
No
RNA replicase polyprotein
Turnip yellow mosaic virus (isolate TYMC)
324
P28477
1676
1681
HDWPSV
14
WxxL
No
RNA replicase polyprotein
Turnip yellow mosaic virus (isolate TYMC)
325
P28477
1715
1720
ALFCKL
2
WxxL
No
RNA replicase polyprotein
Turnip yellow mosaic virus (isolate TYMC)
326
P28477
1749
1754
SLWHLL
11
WxxL
No
RNA replicase polyprotein
Turnip yellow mosaic virus (isolate TYMC)
327
Q8UZB6
951
956
PGFTPI
10
xLIR
No
RNA replication protein
Grapevine fleck virus (isolate Italy/MT48)
328
Q8UZB6
1121
1126
RGYLDL
12
xLIR
No
RNA replication protein
Grapevine fleck virus (isolate Italy/MT48)
329
Q8UZB6
1448
1453
ATFETV
11
xLIR
No
RNA replication protein
Grapevine fleck virus (isolate Italy/MT48)
330
Q8UZB6
68
73
TNFPHL
4
WxxL
No
RNA replication protein
Grapevine fleck virus (isolate Italy/MT48)
331
Q8UZB6
211
216
SKFDKL
10
WxxL
No
RNA replication protein
Grapevine fleck virus (isolate Italy/MT48)
332
Q8UZB6
228
233
SNFLHL
10
WxxL
No
RNA replication protein
Grapevine fleck virus (isolate Italy/MT48)
333
Q8UZB6
244
249
DRYTHL
11
WxxL
No
RNA replication protein
Grapevine fleck virus (isolate Italy/MT48)
334
Q8UZB6
287
292
RLYASL
5
WxxL
No
RNA replication protein
Grapevine fleck virus (isolate Italy/MT48)
335
Q8UZB6
304
309
PFFPSL
1
WxxL
No
RNA replication protein
Grapevine fleck virus (isolate Italy/MT48)
336
Q8UZB6
359
364
ESWFSV
14
WxxL
No
RNA replication protein
Grapevine fleck virus (isolate Italy/MT48)
337
Q8UZB6
415
420
SLFVYV
6
WxxL
No
RNA replication protein
Grapevine fleck virus (isolate Italy/MT48)
338
Q8UZB6
442
447
AEFDWV
8
WxxL
No
RNA replication protein
Grapevine fleck virus (isolate Italy/MT48)
339
Q8UZB6
450
455
EAWDHL
16
WxxL
No
RNA replication protein
Grapevine fleck virus (isolate Italy/MT48)
340
Q8UZB6
456
461
AQFALL
5
WxxL
No
RNA replication protein
Grapevine fleck virus (isolate Italy/MT48)
341
Q8UZB6
469
474
TYFLPL
5
WxxL
No
RNA replication protein
Grapevine fleck virus (isolate Italy/MT48)
342
Q8UZB6
491
496
PIFATL
4
WxxL
No
RNA replication protein
Grapevine fleck virus (isolate Italy/MT48)
343
Q8UZB6
562
567
PSWSPV
14
WxxL
No
RNA replication protein
Grapevine fleck virus (isolate Italy/MT48)
344
Q8UZB6
570
575
LTFSEL
8
WxxL
No
RNA replication protein
Grapevine fleck virus (isolate Italy/MT48)
345
Q8UZB6
612
617
LIFAGL
0
WxxL
No
RNA replication protein
Grapevine fleck virus (isolate Italy/MT48)
346
Q8UZB6
643
648
NRYSDL
5
WxxL
No
RNA replication protein
Grapevine fleck virus (isolate Italy/MT48)
347
Q8UZB6
779
784
RPFSEL
7
WxxL
No
RNA replication protein
Grapevine fleck virus (isolate Italy/MT48)
348
Q8UZB6
807
812
VPYPAL
2
WxxL
No
RNA replication protein
Grapevine fleck virus (isolate Italy/MT48)
349
Q8UZB6
829
834
DLWATL
14
WxxL
No
RNA replication protein
Grapevine fleck virus (isolate Italy/MT48)
350
Q8UZB6
859
864
FTYQWL
9
WxxL
No
RNA replication protein
Grapevine fleck virus (isolate Italy/MT48)
Copyright ©
Ioannis Nezis lab
|
University of Warwick