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LIR-containing proteins in
Tymoviridae
>> EXPORT DATA
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S.No.
Uniprot ID
Start
End
LIR sequence
PSSM Score
▲
▼
Pattern
LIR in Anchor
Description
Species
101
P20130
518
523
QSFLVI
10
WxxL
No
66 kDa protein
Ononis yellow mosaic virus
102
P20127
1706
1711
LSFEPI
10
xLIR
No
RNA replicase polyprotein
Ononis yellow mosaic virus
103
P20127
134
139
PKYEIV
10
WxxL
No
RNA replicase polyprotein
Ononis yellow mosaic virus
104
P20128
398
403
LSFLTL
10
xLIR
No
RNA replicase polyprotein
Turnip yellow mosaic virus (isolate Australia)
105
P10358
398
403
LSFLTL
10
xLIR
No
RNA replicase polyprotein
Turnip yellow mosaic virus
106
P10358
1123
1128
NAWQGV
10
WxxL
No
RNA replicase polyprotein
Turnip yellow mosaic virus
107
Q91TW9
887
892
ERFLML
10
WxxL
No
Genome polyprotein
Maize rayado fino virus (isolate Costa Rica/Guapiles)
108
P36304
1495
1500
NDYAQL
10
WxxL
No
RNA replicase polyprotein
Kennedya yellow mosaic virus (strain Jervis bay)
109
P35928
1053
1058
CGWNAV
10
WxxL
No
RNA replicase polyprotein
Erysimum latent virus
110
P35928
1368
1373
NDYAQL
10
WxxL
No
RNA replicase polyprotein
Erysimum latent virus
111
P35928
1737
1742
VEFELL
10
WxxL
No
RNA replicase polyprotein
Erysimum latent virus
112
P20126
80
85
NHWHAL
10
WxxL
No
RNA replicase polyprotein
Eggplant mosaic virus
113
P20126
1461
1466
NDYAQL
10
WxxL
No
RNA replicase polyprotein
Eggplant mosaic virus
114
P20126
1519
1524
HGYIIL
10
WxxL
No
RNA replicase polyprotein
Eggplant mosaic virus
115
P20126
1671
1676
PLWPTL
10
WxxL
No
RNA replicase polyprotein
Eggplant mosaic virus
116
P28477
398
403
LSFLTL
10
xLIR
No
RNA replicase polyprotein
Turnip yellow mosaic virus (isolate TYMC)
117
P28477
1123
1128
NAWQGV
10
WxxL
No
RNA replicase polyprotein
Turnip yellow mosaic virus (isolate TYMC)
118
Q8UZB6
951
956
PGFTPI
10
xLIR
No
RNA replication protein
Grapevine fleck virus (isolate Italy/MT48)
119
Q8UZB6
211
216
SKFDKL
10
WxxL
No
RNA replication protein
Grapevine fleck virus (isolate Italy/MT48)
120
Q8UZB6
228
233
SNFLHL
10
WxxL
No
RNA replication protein
Grapevine fleck virus (isolate Italy/MT48)
121
P20131
30
35
SRFDSL
9
WxxL
Yes
69 kDa protein
Turnip yellow mosaic virus (isolate Australia)
122
P28478
397
402
RSYPFL
9
WxxL
Yes
69 kDa protein
Turnip yellow mosaic virus (isolate TYMC)
123
P20130
7
12
TSFERI
9
WxxL
No
66 kDa protein
Ononis yellow mosaic virus
124
P20127
290
295
EVYDAL
9
xLIR
No
RNA replicase polyprotein
Ononis yellow mosaic virus
125
P20127
399
404
SHFQIL
9
WxxL
No
RNA replicase polyprotein
Ononis yellow mosaic virus
126
P20128
385
390
QHWRRL
9
WxxL
No
RNA replicase polyprotein
Turnip yellow mosaic virus (isolate Australia)
127
P10358
385
390
QHWRRL
9
WxxL
No
RNA replicase polyprotein
Turnip yellow mosaic virus
128
Q91TW9
466
471
PFWSRL
9
WxxL
No
Genome polyprotein
Maize rayado fino virus (isolate Costa Rica/Guapiles)
129
Q91TW9
737
742
TLWAAL
9
WxxL
No
Genome polyprotein
Maize rayado fino virus (isolate Costa Rica/Guapiles)
130
Q91TW9
1108
1113
PAYVHL
9
WxxL
No
Genome polyprotein
Maize rayado fino virus (isolate Costa Rica/Guapiles)
131
P36304
381
386
QHWRRL
9
WxxL
No
RNA replicase polyprotein
Kennedya yellow mosaic virus (strain Jervis bay)
132
P36304
861
866
FNFQAV
9
WxxL
No
RNA replicase polyprotein
Kennedya yellow mosaic virus (strain Jervis bay)
133
P36304
978
983
EKFIAL
9
WxxL
Yes
RNA replicase polyprotein
Kennedya yellow mosaic virus (strain Jervis bay)
134
P36304
1375
1380
ENFENL
9
WxxL
Yes
RNA replicase polyprotein
Kennedya yellow mosaic virus (strain Jervis bay)
135
P35928
1394
1399
HTFVKI
9
WxxL
No
RNA replicase polyprotein
Erysimum latent virus
136
P35928
1630
1635
SAFDKL
9
WxxL
No
RNA replicase polyprotein
Erysimum latent virus
137
P20126
98
103
SKFQKL
9
WxxL
No
RNA replicase polyprotein
Eggplant mosaic virus
138
P20126
108
113
PKFQEL
9
WxxL
No
RNA replicase polyprotein
Eggplant mosaic virus
139
P20126
565
570
QSFLPL
9
WxxL
Yes
RNA replicase polyprotein
Eggplant mosaic virus
140
P28477
385
390
QHWRRL
9
WxxL
No
RNA replicase polyprotein
Turnip yellow mosaic virus (isolate TYMC)
141
Q8UZB6
859
864
FTYQWL
9
WxxL
No
RNA replication protein
Grapevine fleck virus (isolate Italy/MT48)
142
Q8UZB6
1576
1581
NDFAQL
9
WxxL
No
RNA replication protein
Grapevine fleck virus (isolate Italy/MT48)
143
Q8UZB6
1715
1720
EPFITL
9
WxxL
No
RNA replication protein
Grapevine fleck virus (isolate Italy/MT48)
144
P35927
27
32
SNFSAL
8
WxxL
No
Coat protein
Erysimum latent virus
145
P28478
30
35
SGFNSL
8
WxxL
Yes
69 kDa protein
Turnip yellow mosaic virus (isolate TYMC)
146
P10357
30
35
SGFNSL
8
WxxL
Yes
69 kDa protein
Turnip yellow mosaic virus
147
P20127
108
113
PNFSEL
8
WxxL
No
RNA replicase polyprotein
Ononis yellow mosaic virus
148
P20127
530
535
SPFLPL
8
WxxL
No
RNA replicase polyprotein
Ononis yellow mosaic virus
149
P20127
856
861
NGFDGI
8
WxxL
No
RNA replicase polyprotein
Ononis yellow mosaic virus
150
P20127
1460
1465
KKYQRI
8
WxxL
No
RNA replicase polyprotein
Ononis yellow mosaic virus
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Ioannis Nezis lab
|
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