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LIR-containing proteins in
Betaflexiviridae
>> EXPORT DATA
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S.No.
Uniprot ID
Start
End
LIR sequence
PSSM Score
▲
▼
Pattern
LIR in Anchor
Description
Species
51
Q02106
147
152
AEFQSL
11
xLIR
No
Coat protein
Poplar mosaic virus (isolate ATCC Pv275)
52
Q67705
155
160
GDYSYV
11
WxxL
No
Uncharacterized ORF2 protein
Grapevine virus A (isolate Is 151)
53
Q6PLS1
497
502
VDYSKL
11
WxxL
No
Genome polyprotein
Apple stem grooving virus (strain Korea)
54
Q6PLS1
968
973
EDYGLV
11
WxxL
No
Genome polyprotein
Apple stem grooving virus (strain Korea)
55
P36309
1151
1156
REFQSV
11
xLIR
No
Genome polyprotein
Apple stem grooving virus (strain P-209)
56
P54891
1212
1217
NDFIGI
11
WxxL
No
RNA-directed RNA polymerase
Apple chlorotic leaf spot virus (isolate apple)
57
Q64962
1463
1468
PGYIDL
11
xLIR
No
RNA replication polyprotein
Apple stem pitting virus (isolate PA66)
58
Q91QZ3
418
423
NTFEFL
11
WxxL
No
RNA replication polyprotein
Citrus leaf blotch virus (isolate Nagami kumquat/France/SRA-153/1984)
59
Q91QZ3
530
535
IEWYGI
11
WxxL
No
RNA replication polyprotein
Citrus leaf blotch virus (isolate Nagami kumquat/France/SRA-153/1984)
60
Q91QZ3
1776
1781
DAYIDL
11
WxxL
No
RNA replication polyprotein
Citrus leaf blotch virus (isolate Nagami kumquat/France/SRA-153/1984)
61
P17965
190
195
IDFLDV
11
WxxL
No
RNA replication polyprotein
Potato virus M (strain Russian)
62
Q67704
998
1003
PGYIDL
11
xLIR
No
RNA replication protein
Grapevine virus A (isolate Is 151)
63
Q67704
1389
1394
SNYLKI
11
WxxL
No
RNA replication protein
Grapevine virus A (isolate Is 151)
64
P27738
1211
1216
NDFIGI
11
WxxL
No
RNA-directed RNA polymerase
Apple chlorotic leaf spot virus (isolate plum P863)
65
Q64963
186
191
ATFDIV
11
xLIR
No
Movement and silencing protein TGBp1
Apple stem pitting virus (isolate PA66)
66
P27330
11
16
FGFERL
11
WxxL
No
Movement and silencing protein TGBp1
Lily symptomless virus
67
P37988
186
191
KTFETV
11
xLIR
No
Movement and silencing protein TGBp1
Chrysanthemum virus B
68
Q02109
187
192
KTFEEV
11
xLIR
No
Movement and silencing protein TGBp1
Poplar mosaic virus (isolate ATCC Pv275)
69
P17527
25
30
VVWLLI
11
WxxL
No
Movement protein TGB2
Potato virus M (strain Russian)
70
Q91QZ1
219
224
DPYDGI
10
WxxL
No
Capsid protein
Citrus leaf blotch virus (isolate Nagami kumquat/France/SRA-153/1984)
71
P37991
271
276
NTYKML
10
WxxL
No
Coat protein
Chrysanthemum virus B
72
P27737
54
59
TEFLDL
10
WxxL
No
Coat protein
Apple chlorotic leaf spot virus (isolate plum P863)
73
P54892
332
337
SSFDNI
10
WxxL
Yes
Putative movement protein
Apple chlorotic leaf spot virus (isolate apple)
74
Q91QZ2
85
90
LGFVPI
10
xLIR
No
Putative movement protein
Citrus leaf blotch virus (isolate Nagami kumquat/France/SRA-153/1984)
75
Q67705
45
50
LGYQSI
10
xLIR
No
Uncharacterized ORF2 protein
Grapevine virus A (isolate Is 151)
76
P36309
497
502
IDYSRL
10
WxxL
No
Genome polyprotein
Apple stem grooving virus (strain P-209)
77
P36309
1030
1035
VGFDFI
10
WxxL
No
Genome polyprotein
Apple stem grooving virus (strain P-209)
78
P54891
1134
1139
KGFTDL
10
xLIR
No
RNA-directed RNA polymerase
Apple chlorotic leaf spot virus (isolate apple)
79
P54891
178
183
NLWATL
10
WxxL
No
RNA-directed RNA polymerase
Apple chlorotic leaf spot virus (isolate apple)
80
P54891
1456
1461
MSYEAI
10
WxxL
No
RNA-directed RNA polymerase
Apple chlorotic leaf spot virus (isolate apple)
81
Q64962
366
371
EEFSKL
10
WxxL
No
RNA replication polyprotein
Apple stem pitting virus (isolate PA66)
82
Q64962
978
983
IDFLCL
10
WxxL
No
RNA replication polyprotein
Apple stem pitting virus (isolate PA66)
83
Q64962
1229
1234
DLFEEV
10
WxxL
No
RNA replication polyprotein
Apple stem pitting virus (isolate PA66)
84
Q64962
1783
1788
ERYEAI
10
WxxL
No
RNA replication polyprotein
Apple stem pitting virus (isolate PA66)
85
Q91QZ3
549
554
TEFTLL
10
WxxL
No
RNA replication polyprotein
Citrus leaf blotch virus (isolate Nagami kumquat/France/SRA-153/1984)
86
Q91QZ3
1240
1245
NGYLDL
10
WxxL
No
RNA replication polyprotein
Citrus leaf blotch virus (isolate Nagami kumquat/France/SRA-153/1984)
87
Q91QZ3
1593
1598
ENYQRL
10
WxxL
No
RNA replication polyprotein
Citrus leaf blotch virus (isolate Nagami kumquat/France/SRA-153/1984)
88
Q91QZ3
1723
1728
KNFDDL
10
WxxL
No
RNA replication polyprotein
Citrus leaf blotch virus (isolate Nagami kumquat/France/SRA-153/1984)
89
Q91QZ3
1917
1922
RLYEVL
10
WxxL
No
RNA replication polyprotein
Citrus leaf blotch virus (isolate Nagami kumquat/France/SRA-153/1984)
90
P17965
224
229
YTYDIV
10
WxxL
No
RNA replication polyprotein
Potato virus M (strain Russian)
91
P17965
322
327
VSYEVV
10
WxxL
No
RNA replication polyprotein
Potato virus M (strain Russian)
92
P17965
657
662
EVWRDV
10
WxxL
No
RNA replication polyprotein
Potato virus M (strain Russian)
93
P17965
1351
1356
EEYKSV
10
WxxL
No
RNA replication polyprotein
Potato virus M (strain Russian)
94
P17965
1571
1576
ERFETI
10
WxxL
No
RNA replication polyprotein
Potato virus M (strain Russian)
95
P27738
1133
1138
KGFTDL
10
xLIR
No
RNA-directed RNA polymerase
Apple chlorotic leaf spot virus (isolate plum P863)
96
P27738
27
32
FQYERI
10
WxxL
No
RNA-directed RNA polymerase
Apple chlorotic leaf spot virus (isolate plum P863)
97
P27738
178
183
NLWATL
10
WxxL
No
RNA-directed RNA polymerase
Apple chlorotic leaf spot virus (isolate plum P863)
98
P27738
429
434
SSFDNI
10
WxxL
No
RNA-directed RNA polymerase
Apple chlorotic leaf spot virus (isolate plum P863)
99
Q64963
170
175
LKWHSV
10
WxxL
No
Movement and silencing protein TGBp1
Apple stem pitting virus (isolate PA66)
100
Q64963
206
211
DLFVAL
10
WxxL
No
Movement and silencing protein TGBp1
Apple stem pitting virus (isolate PA66)
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Ioannis Nezis lab
|
University of Warwick