iLIR
@Viral
Home
Classification
ICTV
Caudovirales
Myoviridae
Podoviridae
Siphoviridae
Herpesvirales
Alloherpesviridae
Herpesviridae
Malacoherpesviridae
Ligamenvirales
Lipothrixviridae
Rudiviridae
Mononegavirales
Bornaviridae
Filoviridae
Mymonaviridae
Nyamiviridae
Paramyxoviridae
Pneumoviridae
Rhabdoviridae
Sunviridae
Unassigned
Nidovirales
Arteriviridae
Coronaviridae
Mesoniviridae
Roniviridae
Picornavirales
Dicistroviridae
Iflaviridae
Marnaviridae
Picornaviridae
Secoviridae
Unassigned
Tymovirales
Alphaflexiviridae
Betaflexiviridae
Gammaflexiviridae
Tymoviridae
Unassigned order
Baltimore system
dsDNA
Caudovirales
Myoviridae
Podoviridae
Siphoviridae
Herpesvirales
Alloherpesviridae
Herpesviridae
Malacoherpesviridae
Ligamenvirales
Lipothrixviridae
Rudiviridae
Unassigned order
dsRNA
Unassigned order
Amalgaviridae
Birnaviridae
Chrysoviridae
Cystoviridae
Endornaviridae
Hypoviridae
Megabirnaviridae
Partitiviridae
Picobirnaviridae
Quadriviridae
Reoviridae
Totiviridae
ssDNA
Unassigned order
Anelloviridae
Bidnaviridae
Circoviridae
Geminiviridae
Inoviridae
Nanoviridae
Microviridae
Mycodnaviridae
Parvoviridae
Pleolipoviridae
Spiraviridae
ssRNA (+)
Tymovirales
Alphaflexiviridae
Betaflexiviridae
Gammaflexiviridae
Tymoviridae
Picornavirales
Dicistroviridae
Picornaviridae
Secoviridae
Nidovirales
Arteriviridae
Coronaviridae
Mesoniviridae
Roniviridae
ssRNA (-)
Mononegavirales
Bornaviridae
Rhadbdoviridae
Filoviridae
Nyamaviridae
Paramyxoviridae
Unassigned order
Arenaviridae
Bunyaviridae
Ophioviridae
Orthomyxoviridae
ssRNA-RT
Retroviridae
dsDNA-RT
Caulimoviridae
Hepadnaviridae
Search
BLAST
ICTV
Baltimore system
Bibliography
Help
Links
iLIR Database
LIR Motif Search
LIR-containing proteins in
Betaflexiviridae
>> EXPORT DATA
<< prev
1
2
3
4
5
6
7
8
9
next >>
S.No.
Uniprot ID
Start
End
LIR sequence
PSSM Score
▲
▼
Pattern
LIR in Anchor
Description
Species
101
P17526
76
81
GKFVVL
10
WxxL
No
Movement and silencing protein TGBp1
Potato virus M (strain Russian)
102
P17526
185
190
QTFEVV
10
WxxL
No
Movement and silencing protein TGBp1
Potato virus M (strain Russian)
103
P27333
13
18
AGYLLV
10
xLIR
No
Movement protein TGBp3
Lily symptomless virus
104
P37988
2
7
DVFVKI
10
xLIR
No
Movement and silencing protein TGBp1
Chrysanthemum virus B
105
P37988
11
16
FGFTRL
10
WxxL
No
Movement and silencing protein TGBp1
Chrysanthemum virus B
106
Q02109
176
181
VEFEDI
10
WxxL
No
Movement and silencing protein TGBp1
Poplar mosaic virus (isolate ATCC Pv275)
107
P17527
78
83
QPWAIV
10
WxxL
No
Movement protein TGB2
Potato virus M (strain Russian)
108
P16650
183
188
ATFEHV
10
xLIR
No
Movement and silencing protein TGBp1
Potato virus S (strain Peruvian)
109
P37990
3
8
LSYLDL
10
xLIR
No
Movement protein TGBp3
Chrysanthemum virus B
110
Q67707
116
121
NAYDFL
9
WxxL
No
Capsid protein
Grapevine virus A (isolate Is 151)
111
P54890
54
59
TEFLDV
9
WxxL
No
Coat protein
Apple chlorotic leaf spot virus (isolate apple)
112
Q67706
241
246
EVFETI
9
xLIR
Yes
Movement protein
Grapevine virus A (isolate Is 151)
113
Q6PLS1
770
775
DNFSSV
9
WxxL
No
Genome polyprotein
Apple stem grooving virus (strain Korea)
114
Q6PLS1
1030
1035
VGFDFV
9
WxxL
No
Genome polyprotein
Apple stem grooving virus (strain Korea)
115
Q6PLS1
1539
1544
RLYTIL
9
WxxL
No
Genome polyprotein
Apple stem grooving virus (strain Korea)
116
Q6PLS1
1549
1554
FEYHYL
9
WxxL
No
Genome polyprotein
Apple stem grooving virus (strain Korea)
117
Q6PLS1
1710
1715
PTYSDL
9
WxxL
No
Genome polyprotein
Apple stem grooving virus (strain Korea)
118
P36309
185
190
FLFETI
9
WxxL
No
Genome polyprotein
Apple stem grooving virus (strain P-209)
119
P36309
1539
1544
RLYTIL
9
WxxL
No
Genome polyprotein
Apple stem grooving virus (strain P-209)
120
P36309
1549
1554
FEYHYL
9
WxxL
No
Genome polyprotein
Apple stem grooving virus (strain P-209)
121
P54891
168
173
ETFLQV
9
WxxL
No
RNA-directed RNA polymerase
Apple chlorotic leaf spot virus (isolate apple)
122
Q64962
300
305
NGFEAV
9
WxxL
No
RNA replication polyprotein
Apple stem pitting virus (isolate PA66)
123
Q64962
441
446
LEFVNL
9
WxxL
No
RNA replication polyprotein
Apple stem pitting virus (isolate PA66)
124
Q91QZ3
1519
1524
YNFDFI
9
WxxL
No
RNA replication polyprotein
Citrus leaf blotch virus (isolate Nagami kumquat/France/SRA-153/1984)
125
P22657
348
353
SVYEEV
9
xLIR
No
RNA replication protein (Fragment)
Potato virus S (strain Peruvian)
126
P17965
432
437
ITWWNI
9
WxxL
No
RNA replication polyprotein
Potato virus M (strain Russian)
127
P17965
1538
1543
KEYREV
9
WxxL
No
RNA replication polyprotein
Potato virus M (strain Russian)
128
Q67704
1221
1226
ALYDEI
9
WxxL
Yes
RNA replication protein
Grapevine virus A (isolate Is 151)
129
P27738
168
173
ETFLQV
9
WxxL
No
RNA-directed RNA polymerase
Apple chlorotic leaf spot virus (isolate plum P863)
130
P27738
1039
1044
DLFDKV
9
WxxL
No
RNA-directed RNA polymerase
Apple chlorotic leaf spot virus (isolate plum P863)
131
P27738
1455
1460
MSYEAV
9
WxxL
No
RNA-directed RNA polymerase
Apple chlorotic leaf spot virus (isolate plum P863)
132
Q64965
53
58
EAFIEL
9
WxxL
No
Movement protein TGBp3
Apple stem pitting virus (isolate PA66)
133
Q64963
77
82
GNYSIL
9
WxxL
No
Movement and silencing protein TGBp1
Apple stem pitting virus (isolate PA66)
134
P27330
185
190
QTFESV
9
WxxL
No
Movement and silencing protein TGBp1
Lily symptomless virus
135
P28898
16
21
VSYLAL
9
WxxL
No
Movement protein TGBp3
Carnation latent virus
136
P37989
77
82
QPWFLV
9
WxxL
No
Movement protein TGB2
Chrysanthemum virus B
137
Q67707
128
133
GTYSQL
8
WxxL
No
Capsid protein
Grapevine virus A (isolate Is 151)
138
Q00556
225
230
DCFDYV
8
WxxL
No
Coat protein
Helenium virus S
139
Q01669
232
237
DCFDYV
8
WxxL
Yes
Coat protein
Potato virus M (strain German)
140
P17529
232
237
DCFDYV
8
WxxL
No
Coat protein
Potato virus M (strain Russian)
141
P54892
85
90
VHWGAL
8
WxxL
No
Putative movement protein
Apple chlorotic leaf spot virus (isolate apple)
142
P0C1U3
270
275
RGFRSL
8
WxxL
Yes
Putative movement protein
Apple stem grooving virus (strain Korea)
143
Q91QZ2
80
85
AAYLHL
8
WxxL
No
Putative movement protein
Citrus leaf blotch virus (isolate Nagami kumquat/France/SRA-153/1984)
144
P36698
270
275
RGFRSL
8
WxxL
Yes
Probable movement protein
Apple stem grooving virus (strain P-209)
145
P27739
87
92
VHWGAL
8
WxxL
No
Putative movement protein
Apple chlorotic leaf spot virus (isolate plum P863)
146
Q67705
165
170
SGYKGL
8
WxxL
No
Uncharacterized ORF2 protein
Grapevine virus A (isolate Is 151)
147
Q6PLS1
92
97
SSFKSV
8
WxxL
No
Genome polyprotein
Apple stem grooving virus (strain Korea)
148
Q6PLS1
126
131
GMYNAI
8
WxxL
No
Genome polyprotein
Apple stem grooving virus (strain Korea)
149
Q6PLS1
682
687
KMYCTI
8
WxxL
No
Genome polyprotein
Apple stem grooving virus (strain Korea)
150
Q6PLS1
839
844
GTFMEV
8
WxxL
No
Genome polyprotein
Apple stem grooving virus (strain Korea)
Copyright ©
Ioannis Nezis lab
|
University of Warwick