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iLIR Database
LIR Motif Search
LIR-containing proteins in
Retroviridae
>> EXPORT DATA
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S.No.
Uniprot ID
Start
End
LIR sequence
PSSM Score
▲
▼
Pattern
LIR in Anchor
Description
Species
151
P04579
797
802
RGWEAL
19
xLIR
No
Envelope glycoprotein gp160
Human immunodeficiency virus type 1 group M subtype B (isolate RF/HAT3)
152
Q9Q714
791
796
RGWEAL
19
xLIR
No
Envelope glycoprotein gp160
Human immunodeficiency virus type 1 group M subtype H (isolate VI991)
153
P31872
788
793
RGWEAL
19
xLIR
No
Envelope glycoprotein gp160
Human immunodeficiency virus type 1 group M subtype B (isolate WMJ1)
154
P05883
62
67
DDYQEI
19
xLIR
No
Envelope glycoprotein gp160
Human immunodeficiency virus type 2 subtype A (isolate NIH-Z)
155
P32536
61
66
DDYQEI
19
xLIR
No
Envelope glycoprotein gp160
Human immunodeficiency virus type 2 subtype A (isolate ST/24.1C#2)
156
P17281
9
14
RDWNSL
19
WxxL
No
Envelope glycoprotein gp160
Simian immunodeficiency virus (isolate CPZ GAB1)
157
P20889
14
19
DKWEKI
19
WxxL
No
Gag polyprotein
Human immunodeficiency virus type 1 group M subtype B (isolate OYI)
158
P35962
14
19
DKWEKI
19
WxxL
No
Gag polyprotein
Human immunodeficiency virus type 1 group M subtype B (isolate YU-2)
159
O91079
14
19
DQWESI
19
WxxL
No
Gag polyprotein
Human immunodeficiency virus type 1 group N (isolate YBF30)
160
P31622
158
163
EDWGFL
19
WxxL
Yes
Gag polyprotein
Sheep pulmonary adenomatosis virus
161
Q1A250
14
19
DQWEKI
19
WxxL
No
Gag polyprotein
Simian immunodeficiency virus (isolate EK505)
162
P07567
646
651
QDWTSV
19
WxxL
Yes
Gag polyprotein
Mason-Pfizer monkey virus
163
P04022
647
652
QDWTSV
19
WxxL
Yes
Gag polyprotein
Simian retrovirus SRV-1
164
P51516
643
648
QDWTSV
19
WxxL
Yes
Gag polyprotein
Simian retrovirus SRV-2
165
Q9QC00
14
19
DKWEKI
19
WxxL
No
Gag polyprotein
Human immunodeficiency virus type 1 group M subtype K (isolate 97ZR-EQTB11)
166
P12493
14
19
DKWEKI
19
WxxL
No
Gag polyprotein
Human immunodeficiency virus type 1 group M subtype B (isolate NY5)
167
P05889
14
19
DKWEKI
19
WxxL
No
Gag polyprotein (Fragment)
Human immunodeficiency virus type 1 group M subtype B (isolate WMJ22)
168
P05433
49
54
RSWDPI
19
xLIR
No
P47(GAG-CRK) protein
Avian sarcoma virus (strain CT10)
169
P03349
14
19
DKWEKI
19
WxxL
No
Gag polyprotein
Human immunodeficiency virus type 1 group M subtype B (isolate ARV2/SF2)
170
P05890
14
19
DKWEKI
19
WxxL
No
Gag polyprotein
Human immunodeficiency virus type 1 group M subtype B (isolate RF/HAT3)
171
Q9IDV8
14
19
DQWEAI
19
WxxL
No
Gag polyprotein
Human immunodeficiency virus type 1 group N (isolate YBF106)
172
P21411
729
734
QDWTSV
19
WxxL
Yes
Gag polyprotein
Squirrel monkey retrovirus
173
P04592
14
19
DKWEKI
19
WxxL
No
Gag polyprotein
Human immunodeficiency virus type 1 group M subtype D (isolate ELI)
174
Q89842
11
16
EGWQTI
19
xLIR
No
Protein Nef
Human immunodeficiency virus type 1 group M subtype B (strain 89.6)
175
Q76639
183
188
SSWDDI
19
xLIR
No
Protein Nef
Human immunodeficiency virus type 2 subtype B (isolate UC1)
176
P15829
185
190
SSWDDI
19
xLIR
No
Protein Nef
Human immunodeficiency virus type 2 subtype B (isolate D205)
177
O12158
995
1000
PEWEFV
19
xLIR
No
Gag-Pol polyprotein
Human immunodeficiency virus type 1 group M subtype C (isolate 92BR025)
178
Q9QBY3
994
999
PEWEFV
19
xLIR
No
Gag-Pol polyprotein
Human immunodeficiency virus type 1 group M subtype K (isolate 96CM-MP535)
179
Q9QBZ1
998
1003
PEWEFV
19
xLIR
No
Gag-Pol polyprotein
Human immunodeficiency virus type 1 group M subtype F2 (isolate MP257)
180
Q9WC63
996
1001
PEWEFV
19
xLIR
No
Gag-Pol polyprotein
Human immunodeficiency virus type 1 group M subtype J (isolate SE9173)
181
Q9Q720
1000
1005
PEWEFV
19
xLIR
No
Gag-Pol polyprotein
Human immunodeficiency virus type 1 group M subtype H (isolate VI991)
182
P18096
1022
1027
PEWDFV
19
xLIR
No
Gag-Pol polyprotein
Human immunodeficiency virus type 2 subtype A (isolate BEN)
183
Q89928
1020
1025
PEWDFV
19
xLIR
No
Gag-Pol polyprotein
Human immunodeficiency virus type 2 subtype B (isolate EHO)
184
Q76634
1022
1027
PEWDFV
19
xLIR
No
Gag-Pol polyprotein
Human immunodeficiency virus type 2 subtype B (isolate UC1)
185
Q1A249
14
19
DQWEKI
19
WxxL
No
Gag-Pol polyprotein
Simian immunodeficiency virus (isolate EK505)
186
Q79666
1000
1005
PEWEFV
19
xLIR
No
Gag-Pol polyprotein
Human immunodeficiency virus type 1 group O (isolate MVP5180)
187
P12497
999
1004
PEWEFV
19
xLIR
No
Gag-Pol polyprotein
Human immunodeficiency virus type 1 group M subtype B (isolate NY5)
188
P12497
14
19
DKWEKI
19
WxxL
No
Gag-Pol polyprotein
Human immunodeficiency virus type 1 group M subtype B (isolate NY5)
189
P17757
1021
1026
PEWDFV
19
xLIR
No
Gag-Pol polyprotein
Human immunodeficiency virus type 2 subtype A (isolate D194)
190
P18042
1023
1028
PEWDFV
19
xLIR
No
Gag-Pol polyprotein
Human immunodeficiency virus type 2 subtype A (isolate Ghana-1)
191
P03365
106
111
KGWEII
19
xLIR
No
Pol polyprotein
Mouse mammary tumor virus (strain BR6)
192
P11283
962
967
KGWEII
19
xLIR
No
Gag-Pro-Pol polyprotein
Mouse mammary tumor virus (strain C3H)
193
P19505
1008
1013
PEWDFV
19
xLIR
No
Gag-Pol polyprotein
Simian immunodeficiency virus (isolate PBj14/BCL-3)
194
O41798
999
1004
PEWEFV
19
xLIR
No
Gag-Pol polyprotein
Human immunodeficiency virus type 1 group M subtype G (isolate 92NG083)
195
P03369
1001
1006
PEWEFV
19
xLIR
No
Gag-Pol polyprotein
Human immunodeficiency virus type 1 group M subtype B (isolate ARV2/SF2)
196
P03369
14
19
DKWEKI
19
WxxL
No
Gag-Pol polyprotein
Human immunodeficiency virus type 1 group M subtype B (isolate ARV2/SF2)
197
P03366
1011
1016
PEWEFV
19
xLIR
No
Gag-Pol polyprotein
Human immunodeficiency virus type 1 group M subtype B (isolate BH10)
198
Q75002
1003
1008
PEWEFV
19
xLIR
No
Gag-Pol polyprotein
Human immunodeficiency virus type 1 group M subtype C (isolate ETH2220)
199
P04585
999
1004
PEWEFV
19
xLIR
No
Gag-Pol polyprotein
Human immunodeficiency virus type 1 group M subtype B (isolate HXB2)
200
P20892
998
1003
PEWEFV
19
xLIR
No
Gag-Pol polyprotein
Human immunodeficiency virus type 1 group M subtype B (isolate OYI)
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Ioannis Nezis lab
|
University of Warwick