LIR-containing proteins in Rattus norvegicus>> EXPORT DATA


S.No.Uniprot IDStartEndLIR Sequence PSSM Score ▲  ▼ Similar LIR MotifsProtein Description Molecular FunctionBiological ProcessCellular Component
1001F1LQY5 144 149 EVFDVI 9 FYCO1_HUMAN(1278-1283) AVFDII(4) Protein Drosha (Fragment) RNA processing
(GO:0006396)
1002F1LQZ3 551 556 KVWTML 15 Protein Kif3a centrosome
(GO:0005813);
neuron projection
(GO:0043005)
1003F1LR12 1176 1181 DGYLSL 14 CBL_HUMAN(800-805) FGWLSL(4) Protein Nav2
1004F1LR12 1395 1400 LGFQSV 8 Protein Nav2
1005F1LR18 615 620 STFEKL 12 Rho GTPase-activating protein 39 cytoskeleton
(GO:0005856)
1006F1LR36 99 104 DDFDLI 18 ATG13_HUMAN(442-447) DDFVMI(4);

Q8MQJ7_DROME(389-394) DDFVLV(4);

ULK2_HUMAN(351-356) DDFVLV(4)		 Protein Supt6h nucleobase-containing compound metabolic process
(GO:0006139)
1007F1LR42 38 43 EEFEIV 13 STBD1_HUMAN(201-206) EEWEMV(4) Protein Rufy1
1008F1LR60 445 450 PTYVEV 12 Amyloid beta (A4) protein-binding, family A, member 1, isoform CRA_a membrane
(GO:0016020)
1009F1LRA0 434 439 ETYISL 12 Protein Pcdhga4
1010F1LRA7 637 642 PGFTSL 10 Protein Map3k9
1011F1LRA7 735 740 LGFDLL 10 Protein Map3k9
1012F1LRC7 45 50 GVFESI 7 Protein RGD1311595 (Fragment)
1013F1LRC7 564 569 PEFQLI 11 Protein RGD1311595 (Fragment)
1014F1LRK7 835 840 LGYEVL 12 FUND1_HUMAN(16-21) DSYEVL(4) Contactin-6
1015F1LRL9 831 836 KDFEEL 16 TBCD5_HUMAN(57-62) KEWEEL(4) Microtubule-associated protein 1B hydrolase activity
(GO:0016787)
1016F1LRL9 1455 1460 AGFIPI 10 Microtubule-associated protein 1B hydrolase activity
(GO:0016787)
1017F1LRL9 2348 2353 PVYLDL 7 Microtubule-associated protein 1B hydrolase activity
(GO:0016787)
1018F1LRQ5 152 157 LGYLDL 10 Transmembrane channel-like protein
1019F1LRR4 948 953 PSYLPL 11 Uncharacterized protein
1020F1LRV1 302 307 ASFVVL 12 Protein Npepo nucleolus
(GO:0005730)
1021F1LS04 906 911 LDFLKV 12 Unconventional myosin-Ie (Fragment) motor activity
(GO:0003774)
1022F1LS79 1446 1451 DGFILL 13 Chondroitin sulfate proteoglycan 4 cell proliferation
(GO:0008283)
1023F1LS82 1257 1262 RSYESV 12 Nuclear receptor corepressor 1 chromatin binding
(GO:0003682)		 transcription factor complex
(GO:0005667);
transcriptional repressor complex
(GO:0017053)
1024F1LS84 1177 1182 PSYQEV 11 Leucine-rich repeat-containing protein 7
1025F1LSA0 1202 1207 RSYESV 12 Nuclear receptor corepressor 1 chromatin binding
(GO:0003682)		 nucleus
(GO:0005634)
1026F1LSA1 649 654 GGFDTV 11 CD44 antigen
1027F1LSB0 40 45 SDFLAV 14 Src-like-adapter
1028F1LSB0 255 260 ASYLSL 11 Src-like-adapter
1029F1LSC3 311 316 KEYLSL 12 Protein Sf1 spliceosomal complex
(GO:0005681)
1030F1LSC8 115 120 GDYIPL 15 RIMS-binding protein 2
1031F1LSC8 857 862 FDYDPL 17 RIMS-binding protein 2
1032F1LSD1 546 551 ETFLIL 12 Adenylate cyclase 6, isoform CRA_b nucleotide binding
(GO:0000166)
1033F1LSD3 1630 1635 LVFTAL 5 Integrin beta cell leading edge
(GO:0031252);
cell surface
(GO:0009986)
1034F1LSE5 563 568 LSFELL 10 Neighbor of Brca1 gene 1, isoform CRA_a
1035F1LSE5 748 753 EDYIII 17 NBR1_HUMAN(730-735) EDYIII(6);

TBC25_HUMAN(134-139) EDWDII(4)		 Neighbor of Brca1 gene 1, isoform CRA_a
1036F1LSG1 1179 1184 LSYVLI 11 Potassium channel subfamily T member 1 membrane
(GO:0016020)
1037F1LSH0 428 433 ASFQAI 10 ATG32_YEAST(84-89) GSWQAI(4) Protein Sympk
1038F1LSL3 2657 2662 LGFVDV 9 Inositol 1,4,5-trisphosphate receptor type 3 nucleolus
(GO:0005730)
1039F1LSL7 177 182 PEFTSI 11 Protein Klf5 Golgi apparatus
(GO:0005794);
nucleus
(GO:0005634)
1040F1LSM3 240 245 LEFEAL 11 WD repeat-containing protein 44 (Fragment)
1041F1LSN4 752 757 DEYLDL 15 Fibroblast growth factor receptor cell surface
(GO:0009986);
nucleus
(GO:0005634)
1042F1LSN5 503 508 LVYDSV 6 Histone deacetylase 7 (Fragment)
1043F1LST4 16 21 GDYTML 17 Microtubule-associated protein
1044F1LSX1 1751 1756 DTFTLI 13 Protein RGD1307929
1045F1LT49 476 481 SVFLEV 7 Protein Lrrc47
1046F1LT52 307 312 SEFLAL 12 Protein LOC690284 (Fragment)
1047F1LT58 60 65 AMFDSL 11 Importin subunit alpha (Fragment) nucleus
(GO:0005634)
1048F1LT68 144 149 GSYLSV 10 Protein RGD1562608
1049F1LT90 98 103 AEFEEI 13 Protein LOC100910636 (Fragment)
1050F1LT94 197 202 SVFLKL 7 Protein Arhgef18