iLIR
@Viral
Home
Classification
ICTV
Caudovirales
Myoviridae
Podoviridae
Siphoviridae
Herpesvirales
Alloherpesviridae
Herpesviridae
Malacoherpesviridae
Ligamenvirales
Lipothrixviridae
Rudiviridae
Mononegavirales
Bornaviridae
Filoviridae
Mymonaviridae
Nyamiviridae
Paramyxoviridae
Pneumoviridae
Rhabdoviridae
Sunviridae
Unassigned
Nidovirales
Arteriviridae
Coronaviridae
Mesoniviridae
Roniviridae
Picornavirales
Dicistroviridae
Iflaviridae
Marnaviridae
Picornaviridae
Secoviridae
Unassigned
Tymovirales
Alphaflexiviridae
Betaflexiviridae
Gammaflexiviridae
Tymoviridae
Unassigned order
Baltimore system
dsDNA
Caudovirales
Myoviridae
Podoviridae
Siphoviridae
Herpesvirales
Alloherpesviridae
Herpesviridae
Malacoherpesviridae
Ligamenvirales
Lipothrixviridae
Rudiviridae
Unassigned order
dsRNA
Unassigned order
Amalgaviridae
Birnaviridae
Chrysoviridae
Cystoviridae
Endornaviridae
Hypoviridae
Megabirnaviridae
Partitiviridae
Picobirnaviridae
Quadriviridae
Reoviridae
Totiviridae
ssDNA
Unassigned order
Anelloviridae
Bidnaviridae
Circoviridae
Geminiviridae
Inoviridae
Nanoviridae
Microviridae
Mycodnaviridae
Parvoviridae
Pleolipoviridae
Spiraviridae
ssRNA (+)
Tymovirales
Alphaflexiviridae
Betaflexiviridae
Gammaflexiviridae
Tymoviridae
Picornavirales
Dicistroviridae
Picornaviridae
Secoviridae
Nidovirales
Arteriviridae
Coronaviridae
Mesoniviridae
Roniviridae
ssRNA (-)
Mononegavirales
Bornaviridae
Rhadbdoviridae
Filoviridae
Nyamaviridae
Paramyxoviridae
Unassigned order
Arenaviridae
Bunyaviridae
Ophioviridae
Orthomyxoviridae
ssRNA-RT
Retroviridae
dsDNA-RT
Caulimoviridae
Hepadnaviridae
Search
BLAST
ICTV
Baltimore system
Bibliography
Help
Links
iLIR Database
LIR Motif Search
LIR-containing proteins in
Betaflexiviridae
>> EXPORT DATA
<< prev
1
2
3
4
5
6
7
8
9
next >>
S.No.
Uniprot ID
Start
End
LIR sequence
PSSM Score
▲
▼
Pattern
LIR in Anchor
Description
Species
51
P54892
225
230
ELFNYI
3
WxxL
No
Putative movement protein
Apple chlorotic leaf spot virus (isolate apple)
52
P27739
227
232
ELFNYI
3
WxxL
No
Putative movement protein
Apple chlorotic leaf spot virus (isolate plum P863)
53
Q6PLS1
82
87
LLYICV
3
WxxL
No
Genome polyprotein
Apple stem grooving virus (strain Korea)
54
Q6PLS1
163
168
NKFPKI
3
WxxL
No
Genome polyprotein
Apple stem grooving virus (strain Korea)
55
Q6PLS1
1099
1104
MPFINL
3
WxxL
No
Genome polyprotein
Apple stem grooving virus (strain Korea)
56
Q6PLS1
1431
1436
MLFTQL
3
WxxL
No
Genome polyprotein
Apple stem grooving virus (strain Korea)
57
P36309
82
87
LLYICV
3
WxxL
No
Genome polyprotein
Apple stem grooving virus (strain P-209)
58
P36309
1099
1104
MPFINL
3
WxxL
No
Genome polyprotein
Apple stem grooving virus (strain P-209)
59
P36309
1431
1436
MLFTQL
3
WxxL
No
Genome polyprotein
Apple stem grooving virus (strain P-209)
60
P54891
63
68
SPFAYV
3
WxxL
No
RNA-directed RNA polymerase
Apple chlorotic leaf spot virus (isolate apple)
61
P54891
373
378
WFFDKL
3
WxxL
No
RNA-directed RNA polymerase
Apple chlorotic leaf spot virus (isolate apple)
62
P54891
549
554
LSFGCL
3
WxxL
Yes
RNA-directed RNA polymerase
Apple chlorotic leaf spot virus (isolate apple)
63
P54891
707
712
AAYFCI
3
WxxL
No
RNA-directed RNA polymerase
Apple chlorotic leaf spot virus (isolate apple)
64
Q64962
330
335
KIYRYL
3
WxxL
No
RNA replication polyprotein
Apple stem pitting virus (isolate PA66)
65
Q64962
490
495
HQFHSI
3
WxxL
No
RNA replication polyprotein
Apple stem pitting virus (isolate PA66)
66
Q64962
1957
1962
SKFNGV
3
WxxL
No
RNA replication polyprotein
Apple stem pitting virus (isolate PA66)
67
Q91QZ3
1328
1333
WIFDDV
3
WxxL
No
RNA replication polyprotein
Citrus leaf blotch virus (isolate Nagami kumquat/France/SRA-153/1984)
68
Q91QZ3
1873
1878
TPYGIV
3
WxxL
No
RNA replication polyprotein
Citrus leaf blotch virus (isolate Nagami kumquat/France/SRA-153/1984)
69
P17965
329
334
KIYRYL
3
WxxL
No
RNA replication polyprotein
Potato virus M (strain Russian)
70
P17965
365
370
ECFARL
3
WxxL
No
RNA replication polyprotein
Potato virus M (strain Russian)
71
Q67704
169
174
VQYWSL
3
WxxL
No
RNA replication protein
Grapevine virus A (isolate Is 151)
72
Q67704
1534
1539
FFFNTV
3
WxxL
No
RNA replication protein
Grapevine virus A (isolate Is 151)
73
P22625
15
20
KRFASV
3
WxxL
No
RNA silencing suppressor
Carnation latent virus
74
P16654
59
64
RVYPPV
3
WxxL
No
RNA silencing suppressor
Potato virus S (strain Peruvian)
75
P27336
88
93
RVYPPV
3
WxxL
No
RNA silencing suppressor
Lily symptomless virus
76
P27738
63
68
SPFAYV
3
WxxL
No
RNA-directed RNA polymerase
Apple chlorotic leaf spot virus (isolate plum P863)
77
P27738
373
378
WFFDKL
3
WxxL
No
RNA-directed RNA polymerase
Apple chlorotic leaf spot virus (isolate plum P863)
78
P27738
706
711
AAYFCL
3
WxxL
No
RNA-directed RNA polymerase
Apple chlorotic leaf spot virus (isolate plum P863)
79
P28898
10
15
ALFSAV
3
WxxL
No
Movement protein TGBp3
Carnation latent virus
80
P37988
75
80
LKYFNI
3
WxxL
No
Movement and silencing protein TGBp1
Chrysanthemum virus B
81
P27332
23
28
AFFTGL
3
WxxL
No
Movement protein TGB2
Lily symptomless virus
82
Q91QZ1
53
58
EVFFAI
4
WxxL
No
Capsid protein
Citrus leaf blotch virus (isolate Nagami kumquat/France/SRA-153/1984)
83
Q91QZ1
288
293
DFFYAV
4
WxxL
No
Capsid protein
Citrus leaf blotch virus (isolate Nagami kumquat/France/SRA-153/1984)
84
P16653
186
191
RLYAPV
4
WxxL
No
Coat protein
Potato virus S (strain Peruvian)
85
P16653
193
198
WNYMLV
4
WxxL
No
Coat protein
Potato virus S (strain Peruvian)
86
Q00556
190
195
RLYAPV
4
WxxL
No
Coat protein
Helenium virus S
87
Q01669
197
202
RLYAPV
4
WxxL
No
Coat protein
Potato virus M (strain German)
88
Q02106
219
224
WNYMLV
4
WxxL
No
Coat protein
Poplar mosaic virus (isolate ATCC Pv275)
89
P37991
206
211
RLYAAV
4
WxxL
No
Coat protein
Chrysanthemum virus B
90
P17529
197
202
RLYAPV
4
WxxL
No
Coat protein
Potato virus M (strain Russian)
91
Q6PLS1
1340
1345
KNFFCL
4
WxxL
No
Genome polyprotein
Apple stem grooving virus (strain Korea)
92
Q6PLS1
2012
2017
CTFRKL
4
WxxL
No
Genome polyprotein
Apple stem grooving virus (strain Korea)
93
P36309
1340
1345
KNFFCL
4
WxxL
No
Genome polyprotein
Apple stem grooving virus (strain P-209)
94
P36309
2012
2017
CTFRKL
4
WxxL
No
Genome polyprotein
Apple stem grooving virus (strain P-209)
95
P54891
134
139
ARYGPL
4
WxxL
No
RNA-directed RNA polymerase
Apple chlorotic leaf spot virus (isolate apple)
96
P54891
1256
1261
SNYGNV
4
WxxL
No
RNA-directed RNA polymerase
Apple chlorotic leaf spot virus (isolate apple)
97
P54891
1481
1486
LRFDNV
4
WxxL
No
RNA-directed RNA polymerase
Apple chlorotic leaf spot virus (isolate apple)
98
P54891
1767
1772
LCFDGL
4
WxxL
No
RNA-directed RNA polymerase
Apple chlorotic leaf spot virus (isolate apple)
99
P54891
1822
1827
LNYHQV
4
WxxL
No
RNA-directed RNA polymerase
Apple chlorotic leaf spot virus (isolate apple)
100
Q64962
1515
1520
YKFNIL
4
WxxL
No
RNA replication polyprotein
Apple stem pitting virus (isolate PA66)
Copyright ©
Ioannis Nezis lab
|
University of Warwick