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LIR-containing proteins in
Betaflexiviridae
>> EXPORT DATA
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S.No.
Uniprot ID
Start
End
LIR sequence
PSSM Score
▲
▼
Pattern
LIR in Anchor
Description
Species
151
P54891
1048
1053
LNFMKV
5
WxxL
No
RNA-directed RNA polymerase
Apple chlorotic leaf spot virus (isolate apple)
152
P54891
1382
1387
KRYHIV
5
WxxL
No
RNA-directed RNA polymerase
Apple chlorotic leaf spot virus (isolate apple)
153
P54891
1699
1704
FLFNTL
5
WxxL
No
RNA-directed RNA polymerase
Apple chlorotic leaf spot virus (isolate apple)
154
Q64962
93
98
NSFYLV
5
WxxL
No
RNA replication polyprotein
Apple stem pitting virus (isolate PA66)
155
Q64962
226
231
YTFRIV
5
WxxL
No
RNA replication polyprotein
Apple stem pitting virus (isolate PA66)
156
Q64962
392
397
GFFLKL
5
WxxL
No
RNA replication polyprotein
Apple stem pitting virus (isolate PA66)
157
Q64962
1102
1107
CFWHSV
5
WxxL
No
RNA replication polyprotein
Apple stem pitting virus (isolate PA66)
158
Q64962
1310
1315
MRFLAI
5
WxxL
No
RNA replication polyprotein
Apple stem pitting virus (isolate PA66)
159
Q64962
2034
2039
MLFTFL
5
WxxL
No
RNA replication polyprotein
Apple stem pitting virus (isolate PA66)
160
Q91QZ3
502
507
NAYNIL
5
WxxL
No
RNA replication polyprotein
Citrus leaf blotch virus (isolate Nagami kumquat/France/SRA-153/1984)
161
Q91QZ3
667
672
INYNDI
5
WxxL
Yes
RNA replication polyprotein
Citrus leaf blotch virus (isolate Nagami kumquat/France/SRA-153/1984)
162
Q91QZ3
786
791
NHFVGI
5
WxxL
No
RNA replication polyprotein
Citrus leaf blotch virus (isolate Nagami kumquat/France/SRA-153/1984)
163
Q91QZ3
1061
1066
NHFSVI
5
WxxL
No
RNA replication polyprotein
Citrus leaf blotch virus (isolate Nagami kumquat/France/SRA-153/1984)
164
Q91QZ3
1184
1189
GNFCVV
5
WxxL
No
RNA replication polyprotein
Citrus leaf blotch virus (isolate Nagami kumquat/France/SRA-153/1984)
165
Q91QZ3
1359
1364
KAFSPI
5
WxxL
No
RNA replication polyprotein
Citrus leaf blotch virus (isolate Nagami kumquat/France/SRA-153/1984)
166
Q91QZ3
1376
1381
LTFNHV
5
WxxL
No
RNA replication polyprotein
Citrus leaf blotch virus (isolate Nagami kumquat/France/SRA-153/1984)
167
Q91QZ3
1804
1809
FLFNTL
5
WxxL
No
RNA replication polyprotein
Citrus leaf blotch virus (isolate Nagami kumquat/France/SRA-153/1984)
168
P22657
210
215
MLFTFL
5
WxxL
No
RNA replication protein (Fragment)
Potato virus S (strain Peruvian)
169
P22657
281
286
LVFERL
5
WxxL
No
RNA replication protein (Fragment)
Potato virus S (strain Peruvian)
170
P17965
403
408
RRFSSV
5
WxxL
No
RNA replication polyprotein
Potato virus M (strain Russian)
171
P17965
881
886
ERYKRV
5
WxxL
No
RNA replication polyprotein
Potato virus M (strain Russian)
172
P17965
1814
1819
FLFNTL
5
WxxL
No
RNA replication polyprotein
Potato virus M (strain Russian)
173
P37987
113
118
MLFTFL
5
WxxL
No
RNA replication protein (Fragment)
Chrysanthemum virus B
174
Q67704
1603
1608
SPFGII
5
WxxL
No
RNA replication protein
Grapevine virus A (isolate Is 151)
175
P27738
307
312
SVFKKI
5
WxxL
No
RNA-directed RNA polymerase
Apple chlorotic leaf spot virus (isolate plum P863)
176
P27738
1047
1052
LNFMKV
5
WxxL
No
RNA-directed RNA polymerase
Apple chlorotic leaf spot virus (isolate plum P863)
177
P27738
1698
1703
FLFNTL
5
WxxL
No
RNA-directed RNA polymerase
Apple chlorotic leaf spot virus (isolate plum P863)
178
Q64963
148
153
NIFQLI
5
WxxL
No
Movement and silencing protein TGBp1
Apple stem pitting virus (isolate PA66)
179
P17528
2
7
IVYVLV
5
WxxL
No
Movement protein TGBp3
Potato virus M (strain Russian)
180
P16650
11
16
YKFERV
5
WxxL
No
Movement and silencing protein TGBp1
Potato virus S (strain Peruvian)
181
P54890
137
142
GKYPEL
6
WxxL
No
Coat protein
Apple chlorotic leaf spot virus (isolate apple)
182
P37991
108
113
NMYSQV
6
WxxL
Yes
Coat protein
Chrysanthemum virus B
183
P27739
26
31
RIYSDI
6
WxxL
No
Putative movement protein
Apple chlorotic leaf spot virus (isolate plum P863)
184
Q6PLS1
185
190
YLFETI
6
WxxL
No
Genome polyprotein
Apple stem grooving virus (strain Korea)
185
Q6PLS1
698
703
ECFIRL
6
WxxL
No
Genome polyprotein
Apple stem grooving virus (strain Korea)
186
Q6PLS1
937
942
EWFQSL
6
WxxL
No
Genome polyprotein
Apple stem grooving virus (strain Korea)
187
Q6PLS1
1305
1310
ACFQHI
6
WxxL
No
Genome polyprotein
Apple stem grooving virus (strain Korea)
188
Q6PLS1
1495
1500
SPYGII
6
WxxL
No
Genome polyprotein
Apple stem grooving virus (strain Korea)
189
Q6PLS1
1693
1698
SLYMTV
6
WxxL
No
Genome polyprotein
Apple stem grooving virus (strain Korea)
190
P36309
698
703
ECFIRL
6
WxxL
No
Genome polyprotein
Apple stem grooving virus (strain P-209)
191
P36309
1305
1310
ACFQHI
6
WxxL
No
Genome polyprotein
Apple stem grooving virus (strain P-209)
192
P36309
1495
1500
SPYGII
6
WxxL
No
Genome polyprotein
Apple stem grooving virus (strain P-209)
193
P36309
1706
1711
ATFARI
6
WxxL
No
Genome polyprotein
Apple stem grooving virus (strain P-209)
194
P36309
1813
1818
CFWKKV
6
WxxL
No
Genome polyprotein
Apple stem grooving virus (strain P-209)
195
P54891
92
97
SKYSYV
6
WxxL
No
RNA-directed RNA polymerase
Apple chlorotic leaf spot virus (isolate apple)
196
P54891
475
480
EIYSDL
6
WxxL
No
RNA-directed RNA polymerase
Apple chlorotic leaf spot virus (isolate apple)
197
P54891
1778
1783
LIYERL
6
WxxL
No
RNA-directed RNA polymerase
Apple chlorotic leaf spot virus (isolate apple)
198
P54891
1812
1817
RLYSHL
6
WxxL
No
RNA-directed RNA polymerase
Apple chlorotic leaf spot virus (isolate apple)
199
Q64962
134
139
GGFFHV
6
WxxL
No
RNA replication polyprotein
Apple stem pitting virus (isolate PA66)
200
Q64962
552
557
RIFEGI
6
WxxL
No
RNA replication polyprotein
Apple stem pitting virus (isolate PA66)
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Ioannis Nezis lab
|
University of Warwick