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LIR-containing proteins in
Betaflexiviridae
>> EXPORT DATA
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S.No.
Uniprot ID
Start
End
LIR sequence
PSSM Score
▲
▼
Pattern
LIR in Anchor
Description
Species
301
P36309
185
190
FLFETI
9
WxxL
No
Genome polyprotein
Apple stem grooving virus (strain P-209)
302
P36309
1539
1544
RLYTIL
9
WxxL
No
Genome polyprotein
Apple stem grooving virus (strain P-209)
303
P36309
1549
1554
FEYHYL
9
WxxL
No
Genome polyprotein
Apple stem grooving virus (strain P-209)
304
P54891
168
173
ETFLQV
9
WxxL
No
RNA-directed RNA polymerase
Apple chlorotic leaf spot virus (isolate apple)
305
Q64962
300
305
NGFEAV
9
WxxL
No
RNA replication polyprotein
Apple stem pitting virus (isolate PA66)
306
Q64962
441
446
LEFVNL
9
WxxL
No
RNA replication polyprotein
Apple stem pitting virus (isolate PA66)
307
Q91QZ3
1519
1524
YNFDFI
9
WxxL
No
RNA replication polyprotein
Citrus leaf blotch virus (isolate Nagami kumquat/France/SRA-153/1984)
308
P22657
348
353
SVYEEV
9
xLIR
No
RNA replication protein (Fragment)
Potato virus S (strain Peruvian)
309
P17965
432
437
ITWWNI
9
WxxL
No
RNA replication polyprotein
Potato virus M (strain Russian)
310
P17965
1538
1543
KEYREV
9
WxxL
No
RNA replication polyprotein
Potato virus M (strain Russian)
311
Q67704
1221
1226
ALYDEI
9
WxxL
Yes
RNA replication protein
Grapevine virus A (isolate Is 151)
312
P27738
168
173
ETFLQV
9
WxxL
No
RNA-directed RNA polymerase
Apple chlorotic leaf spot virus (isolate plum P863)
313
P27738
1039
1044
DLFDKV
9
WxxL
No
RNA-directed RNA polymerase
Apple chlorotic leaf spot virus (isolate plum P863)
314
P27738
1455
1460
MSYEAV
9
WxxL
No
RNA-directed RNA polymerase
Apple chlorotic leaf spot virus (isolate plum P863)
315
Q64965
53
58
EAFIEL
9
WxxL
No
Movement protein TGBp3
Apple stem pitting virus (isolate PA66)
316
Q64963
77
82
GNYSIL
9
WxxL
No
Movement and silencing protein TGBp1
Apple stem pitting virus (isolate PA66)
317
P27330
185
190
QTFESV
9
WxxL
No
Movement and silencing protein TGBp1
Lily symptomless virus
318
P28898
16
21
VSYLAL
9
WxxL
No
Movement protein TGBp3
Carnation latent virus
319
P37989
77
82
QPWFLV
9
WxxL
No
Movement protein TGB2
Chrysanthemum virus B
320
Q91QZ1
219
224
DPYDGI
10
WxxL
No
Capsid protein
Citrus leaf blotch virus (isolate Nagami kumquat/France/SRA-153/1984)
321
P37991
271
276
NTYKML
10
WxxL
No
Coat protein
Chrysanthemum virus B
322
P27737
54
59
TEFLDL
10
WxxL
No
Coat protein
Apple chlorotic leaf spot virus (isolate plum P863)
323
P54892
332
337
SSFDNI
10
WxxL
Yes
Putative movement protein
Apple chlorotic leaf spot virus (isolate apple)
324
Q91QZ2
85
90
LGFVPI
10
xLIR
No
Putative movement protein
Citrus leaf blotch virus (isolate Nagami kumquat/France/SRA-153/1984)
325
Q67705
45
50
LGYQSI
10
xLIR
No
Uncharacterized ORF2 protein
Grapevine virus A (isolate Is 151)
326
P36309
497
502
IDYSRL
10
WxxL
No
Genome polyprotein
Apple stem grooving virus (strain P-209)
327
P36309
1030
1035
VGFDFI
10
WxxL
No
Genome polyprotein
Apple stem grooving virus (strain P-209)
328
P54891
1134
1139
KGFTDL
10
xLIR
No
RNA-directed RNA polymerase
Apple chlorotic leaf spot virus (isolate apple)
329
P54891
178
183
NLWATL
10
WxxL
No
RNA-directed RNA polymerase
Apple chlorotic leaf spot virus (isolate apple)
330
P54891
1456
1461
MSYEAI
10
WxxL
No
RNA-directed RNA polymerase
Apple chlorotic leaf spot virus (isolate apple)
331
Q64962
366
371
EEFSKL
10
WxxL
No
RNA replication polyprotein
Apple stem pitting virus (isolate PA66)
332
Q64962
978
983
IDFLCL
10
WxxL
No
RNA replication polyprotein
Apple stem pitting virus (isolate PA66)
333
Q64962
1229
1234
DLFEEV
10
WxxL
No
RNA replication polyprotein
Apple stem pitting virus (isolate PA66)
334
Q64962
1783
1788
ERYEAI
10
WxxL
No
RNA replication polyprotein
Apple stem pitting virus (isolate PA66)
335
Q91QZ3
549
554
TEFTLL
10
WxxL
No
RNA replication polyprotein
Citrus leaf blotch virus (isolate Nagami kumquat/France/SRA-153/1984)
336
Q91QZ3
1240
1245
NGYLDL
10
WxxL
No
RNA replication polyprotein
Citrus leaf blotch virus (isolate Nagami kumquat/France/SRA-153/1984)
337
Q91QZ3
1593
1598
ENYQRL
10
WxxL
No
RNA replication polyprotein
Citrus leaf blotch virus (isolate Nagami kumquat/France/SRA-153/1984)
338
Q91QZ3
1723
1728
KNFDDL
10
WxxL
No
RNA replication polyprotein
Citrus leaf blotch virus (isolate Nagami kumquat/France/SRA-153/1984)
339
Q91QZ3
1917
1922
RLYEVL
10
WxxL
No
RNA replication polyprotein
Citrus leaf blotch virus (isolate Nagami kumquat/France/SRA-153/1984)
340
P17965
224
229
YTYDIV
10
WxxL
No
RNA replication polyprotein
Potato virus M (strain Russian)
341
P17965
322
327
VSYEVV
10
WxxL
No
RNA replication polyprotein
Potato virus M (strain Russian)
342
P17965
657
662
EVWRDV
10
WxxL
No
RNA replication polyprotein
Potato virus M (strain Russian)
343
P17965
1351
1356
EEYKSV
10
WxxL
No
RNA replication polyprotein
Potato virus M (strain Russian)
344
P17965
1571
1576
ERFETI
10
WxxL
No
RNA replication polyprotein
Potato virus M (strain Russian)
345
P27738
1133
1138
KGFTDL
10
xLIR
No
RNA-directed RNA polymerase
Apple chlorotic leaf spot virus (isolate plum P863)
346
P27738
27
32
FQYERI
10
WxxL
No
RNA-directed RNA polymerase
Apple chlorotic leaf spot virus (isolate plum P863)
347
P27738
178
183
NLWATL
10
WxxL
No
RNA-directed RNA polymerase
Apple chlorotic leaf spot virus (isolate plum P863)
348
P27738
429
434
SSFDNI
10
WxxL
No
RNA-directed RNA polymerase
Apple chlorotic leaf spot virus (isolate plum P863)
349
Q64963
170
175
LKWHSV
10
WxxL
No
Movement and silencing protein TGBp1
Apple stem pitting virus (isolate PA66)
350
Q64963
206
211
DLFVAL
10
WxxL
No
Movement and silencing protein TGBp1
Apple stem pitting virus (isolate PA66)
Copyright ©
Ioannis Nezis lab
|
University of Warwick