LIR-containing proteins in  Betaflexiviridae   >> EXPORT DATA


S.No. Uniprot ID Start End LIR sequence PSSM Score    Pattern LIR in Anchor Description Species
101Q64962 1987 1992 MKFLGL 4 WxxL No RNA replication polyprotein Apple stem pitting virus (isolate PA66)
102Q91QZ3 334 339 KVYSYL 4 WxxL No RNA replication polyprotein Citrus leaf blotch virus (isolate Nagami kumquat/France/SRA-153/1984)
103Q91QZ3 437 442 VCFEHV 4 WxxL No RNA replication polyprotein Citrus leaf blotch virus (isolate Nagami kumquat/France/SRA-153/1984)
104Q91QZ3 1439 1444 ITFNRL 4 WxxL No RNA replication polyprotein Citrus leaf blotch virus (isolate Nagami kumquat/France/SRA-153/1984)
105Q91QZ3 1561 1566 LRFKAI 4 WxxL No RNA replication polyprotein Citrus leaf blotch virus (isolate Nagami kumquat/France/SRA-153/1984)
106P22657 163 168 MRYLGL 4 WxxL No RNA replication protein (Fragment) Potato virus S (strain Peruvian)
107P17965 82 87 ILYSVL 4 WxxL No RNA replication polyprotein Potato virus M (strain Russian)
108P17965 897 902 HSFAYL 4 WxxL No RNA replication polyprotein Potato virus M (strain Russian)
109Q67704 124 129 TQYNRL 4 WxxL No RNA replication protein Grapevine virus A (isolate Is 151)
110Q67704 140 145 NAFREL 4 WxxL No RNA replication protein Grapevine virus A (isolate Is 151)
111Q67704 190 195 VVYSII 4 WxxL No RNA replication protein Grapevine virus A (isolate Is 151)
112Q67704 1039 1044 DVFNRV 4 WxxL No RNA replication protein Grapevine virus A (isolate Is 151)
113Q00572 35 40 RAFPKL 4 WxxL No RNA silencing suppressor Helenium virus S
114Q00572 65 70 RVYPPL 4 WxxL No RNA silencing suppressor Helenium virus S
115P37992 61 66 RVYPPL 4 WxxL No RNA silencing suppressor Chrysanthemum virus B
116P27738 134 139 ARYGPL 4 WxxL No RNA-directed RNA polymerase Apple chlorotic leaf spot virus (isolate plum P863)
117P27738 1255 1260 SNYGNV 4 WxxL No RNA-directed RNA polymerase Apple chlorotic leaf spot virus (isolate plum P863)
118P27738 1480 1485 LRFDNV 4 WxxL No RNA-directed RNA polymerase Apple chlorotic leaf spot virus (isolate plum P863)
119P27738 1821 1826 LNYHQV 4 WxxL No RNA-directed RNA polymerase Apple chlorotic leaf spot virus (isolate plum P863)
120Q64965 64 69 PYYHPL 4 WxxL No Movement protein TGBp3 Apple stem pitting virus (isolate PA66)
121Q64963 92 97 TGFNCL 4 WxxL No Movement and silencing protein TGBp1 Apple stem pitting virus (isolate PA66)
122P27330 204 209 LAFQCL 4 WxxL No Movement and silencing protein TGBp1 Lily symptomless virus
123P27333 49 54 AHFRAI 4 WxxL No Movement protein TGBp3 Lily symptomless virus
124P17528 10 15 SAFCIV 4 WxxL No Movement protein TGBp3 Potato virus M (strain Russian)
125P37988 112 117 AHFKAV 4 WxxL No Movement and silencing protein TGBp1 Chrysanthemum virus B
126P37988 207 212 LVYQCL 4 WxxL No Movement and silencing protein TGBp1 Chrysanthemum virus B
127Q91QZ1 35 40 RKFRAV 5 WxxL No Capsid protein Citrus leaf blotch virus (isolate Nagami kumquat/France/SRA-153/1984)
128Q00556 197 202 WNYMHI 5 WxxL No Coat protein Helenium virus S
129Q00556 255 260 NAYKLI 5 WxxL No Coat protein Helenium virus S
130P27335 184 189 RLYAPI 5 WxxL No Coat protein Lily symptomless virus
131Q02106 73 78 ERFNLL 5 WxxL Yes Coat protein Poplar mosaic virus (isolate ATCC Pv275)
132Q02106 212 217 RLYAPI 5 WxxL No Coat protein Poplar mosaic virus (isolate ATCC Pv275)
133P37991 213 218 WNYMHL 5 WxxL No Coat protein Chrysanthemum virus B
134P54892 24 29 RIYSDV 5 WxxL No Putative movement protein Apple chlorotic leaf spot virus (isolate apple)
135P0C1U3 81 86 NKYKYL 5 WxxL No Putative movement protein Apple stem grooving virus (strain Korea)
136P36698 81 86 NKYKYL 5 WxxL No Probable movement protein Apple stem grooving virus (strain P-209)
137Q6PLS1 383 388 DKFCQV 5 WxxL No Genome polyprotein Apple stem grooving virus (strain Korea)
138Q6PLS1 1194 1199 TFWAGV 5 WxxL No Genome polyprotein Apple stem grooving virus (strain Korea)
139Q6PLS1 1384 1389 LQYLGV 5 WxxL No Genome polyprotein Apple stem grooving virus (strain Korea)
140Q6PLS1 1526 1531 YLFEAI 5 WxxL No Genome polyprotein Apple stem grooving virus (strain Korea)
141Q6PLS1 1728 1733 IAYLQL 5 WxxL No Genome polyprotein Apple stem grooving virus (strain Korea)
142Q6PLS1 1813 1818 CFWRKV 5 WxxL No Genome polyprotein Apple stem grooving virus (strain Korea)
143Q6PLS1 2019 2024 EPFADL 5 WxxL No Genome polyprotein Apple stem grooving virus (strain Korea)
144P36309 383 388 DKFCQV 5 WxxL No Genome polyprotein Apple stem grooving virus (strain P-209)
145P36309 937 942 QWFQEL 5 WxxL No Genome polyprotein Apple stem grooving virus (strain P-209)
146P36309 1194 1199 TFWAGV 5 WxxL No Genome polyprotein Apple stem grooving virus (strain P-209)
147P36309 1384 1389 LQYLGV 5 WxxL No Genome polyprotein Apple stem grooving virus (strain P-209)
148P36309 1526 1531 YLFEAI 5 WxxL No Genome polyprotein Apple stem grooving virus (strain P-209)
149P36309 2019 2024 EPFADL 5 WxxL No Genome polyprotein Apple stem grooving virus (strain P-209)
150P54891 307 312 SVFKKI 5 WxxL No RNA-directed RNA polymerase Apple chlorotic leaf spot virus (isolate apple)









Copyright © Ioannis Nezis lab | University of Warwick